RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 RIPK4P57078 832 aa17.29■□□□□ 0.36
BRAT1-205ENST00000473879 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
BRAT1-205ENST00000473879 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
BRAT1-205ENST00000473879 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
BRAT1-205ENST00000473879 GOLGA2Q08379 1002 aa17.28■□□□□ 0.36
BRAT1-205ENST00000473879 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
BRAT1-205ENST00000473879 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
BRAT1-205ENST00000473879 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
BRAT1-205ENST00000473879 MCM10Q7L590 875 aa17.27■□□□□ 0.36
BRAT1-205ENST00000473879 WDR63Q8IWG1 891 aa17.27■□□□□ 0.36
BRAT1-205ENST00000473879 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
BRAT1-205ENST00000473879 TRIM35Q9UPQ4 493 aa17.27■□□□□ 0.36
BRAT1-205ENST00000473879 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
BRAT1-205ENST00000473879 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
BRAT1-205ENST00000473879 CYP19A1P11511 503 aaPredicted RBP17.26■□□□□ 0.35
BRAT1-205ENST00000473879 CALD1Q05682 793 aaKnown RBP17.26■□□□□ 0.35
BRAT1-205ENST00000473879 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
BRAT1-205ENST00000473879 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
BRAT1-205ENST00000473879 DCTN1Q14203 1278 aa17.25■□□□□ 0.35
BRAT1-205ENST00000473879 CCDC87Q9NVE4 849 aa17.25■□□□□ 0.35
BRAT1-205ENST00000473879 E9PSI1 815 aa17.24■□□□□ 0.35
BRAT1-205ENST00000473879 RFC4P35249 363 aa17.24■□□□□ 0.35
BRAT1-205ENST00000473879 ZNF496Q96IT1 587 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-205ENST00000473879 TEX13AQ9BXU3 409 aaPredicted RBP17.24■□□□□ 0.35
BRAT1-205ENST00000473879 LAMB4A4D0S4 1761 aa17.24■□□□□ 0.35
BRAT1-205ENST00000473879 IL16Q14005 1332 aa17.23■□□□□ 0.35
BRAT1-205ENST00000473879 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
BRAT1-205ENST00000473879 FMNL2Q96PY5 1086 aa17.23■□□□□ 0.35
BRAT1-205ENST00000473879 STARD3NLO95772 234 aa17.22■□□□□ 0.35
BRAT1-205ENST00000473879 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
BRAT1-205ENST00000473879 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
BRAT1-205ENST00000473879 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
BRAT1-205ENST00000473879 KCNQ3O43525 872 aa17.21■□□□□ 0.35
BRAT1-205ENST00000473879 GYS1P13807 737 aa17.21■□□□□ 0.35
BRAT1-205ENST00000473879 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
BRAT1-205ENST00000473879 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
BRAT1-205ENST00000473879 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
BRAT1-205ENST00000473879 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
BRAT1-205ENST00000473879 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
BRAT1-205ENST00000473879 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
BRAT1-205ENST00000473879 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
BRAT1-205ENST00000473879 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
BRAT1-205ENST00000473879 USP42Q9H9J4 1324 aaKnown RBP17.2■□□□□ 0.34
BRAT1-205ENST00000473879 MMP10P09238 476 aa17.19■□□□□ 0.34
BRAT1-205ENST00000473879 NLGN2Q8NFZ4 835 aa17.19■□□□□ 0.34
BRAT1-205ENST00000473879 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
BRAT1-205ENST00000473879 DUSP27Q5VZP5 1158 aa17.17■□□□□ 0.34
BRAT1-205ENST00000473879 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
BRAT1-205ENST00000473879 SRP68Q9UHB9 627 aaKnown RBP17.17■□□□□ 0.34
BRAT1-205ENST00000473879 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
BRAT1-205ENST00000473879 COL15A1P39059 1388 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 CHL1O00533 1208 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 ZPR1O75312 459 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
BRAT1-205ENST00000473879 CANXP27824 592 aaKnown RBP17.16■□□□□ 0.34
BRAT1-205ENST00000473879 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
BRAT1-205ENST00000473879 GNAI1P63096 354 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 NARFQ9UHQ1 456 aa17.16■□□□□ 0.34
BRAT1-205ENST00000473879 FKBP8Q14318 412 aa17.15■□□□□ 0.34
BRAT1-205ENST00000473879 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
BRAT1-205ENST00000473879 A0A087WZG4 1122 aa17.14■□□□□ 0.33
BRAT1-205ENST00000473879 IL6STP40189 918 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-205ENST00000473879 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
BRAT1-205ENST00000473879 GPR162Q16538 588 aa17.14■□□□□ 0.33
BRAT1-205ENST00000473879 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
BRAT1-205ENST00000473879 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
BRAT1-205ENST00000473879 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
BRAT1-205ENST00000473879 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
BRAT1-205ENST00000473879 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
BRAT1-205ENST00000473879 A1BGP04217 495 aa17.13■□□□□ 0.33
BRAT1-205ENST00000473879 TM4SF1P30408 202 aa17.13■□□□□ 0.33
BRAT1-205ENST00000473879 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
BRAT1-205ENST00000473879 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
BRAT1-205ENST00000473879 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
BRAT1-205ENST00000473879 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
BRAT1-205ENST00000473879 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
BRAT1-205ENST00000473879 BCORQ6W2J9 1755 aa17.12■□□□□ 0.33
BRAT1-205ENST00000473879 CHD4Q14839 1912 aa17.11■□□□□ 0.33
BRAT1-205ENST00000473879 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-205ENST00000473879 BCL2L12Q9HB09 334 aa17.11■□□□□ 0.33
BRAT1-205ENST00000473879 TGFB2P61812 414 aa17.1■□□□□ 0.33
BRAT1-205ENST00000473879 DDR1Q08345 913 aa17.1■□□□□ 0.33
BRAT1-205ENST00000473879 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
BRAT1-205ENST00000473879 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
BRAT1-205ENST00000473879 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
BRAT1-205ENST00000473879 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
BRAT1-205ENST00000473879 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
BRAT1-205ENST00000473879 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
BRAT1-205ENST00000473879 GRIN3BO60391 1043 aa17.08■□□□□ 0.32
BRAT1-205ENST00000473879 YBX3P16989 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
BRAT1-205ENST00000473879 YY1P25490 414 aa17.08■□□□□ 0.32
BRAT1-205ENST00000473879 NFIXQ14938 502 aa17.08■□□□□ 0.32
BRAT1-205ENST00000473879 TSPYL4Q9UJ04 414 aa17.08■□□□□ 0.32
BRAT1-205ENST00000473879 RCAN3Q9UKA8 241 aa17.08■□□□□ 0.32
BRAT1-205ENST00000473879 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.32
BRAT1-205ENST00000473879 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
BRAT1-205ENST00000473879 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
BRAT1-205ENST00000473879 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
BRAT1-205ENST00000473879 TBC1D2BQ9UPU7 963 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms