RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 INTS3Q68E01 1043 aaKnown RBP34.87■■■■□ 3.17
HOXB3-207ENST00000472863 PCDHB15Q9Y5E8 787 aa34.87■■■■□ 3.17
HOXB3-207ENST00000472863 KCPQ6ZWJ8 1503 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 ZBTB7BO15156 539 aaPredicted RBP34.85■■■■□ 3.17
HOXB3-207ENST00000472863 ATG3Q9NT62 314 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 ZBTB40Q9NUA8 1239 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 BCL9O00512 1426 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 UBR2Q8IWV8 1755 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 GLI3P10071 1580 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 PDIA6Q15084 440 aa34.85■■■■□ 3.17
HOXB3-207ENST00000472863 SLC4A10Q6U841 1118 aa34.84■■■■□ 3.17
HOXB3-207ENST00000472863 TRPC5Q9UL62 973 aaPredicted RBP34.84■■■■□ 3.17
HOXB3-207ENST00000472863 ACSBG1Q96GR2 724 aa34.83■■■■□ 3.17
HOXB3-207ENST00000472863 ATRNO75882 1429 aa34.82■■■■□ 3.17
HOXB3-207ENST00000472863 DDX21Q9NR30 783 aaKnown RBP eCLIP34.82■■■■□ 3.16
HOXB3-207ENST00000472863 DOT1LQ8TEK3 1739 aa34.82■■■■□ 3.16
HOXB3-207ENST00000472863 IGHDP01880 384 aa34.8■■■■□ 3.16
HOXB3-207ENST00000472863 QTRT2Q9H974 415 aaKnown RBP34.8■■■■□ 3.16
HOXB3-207ENST00000472863 KDM2BQ8NHM5 1336 aa34.79■■■■□ 3.16
HOXB3-207ENST00000472863 HYPKQ9NX55 129 aa34.79■■■■□ 3.16
HOXB3-207ENST00000472863 MYL6BP14649 208 aa34.77■■■■□ 3.16
HOXB3-207ENST00000472863 PIP4K2AP48426 406 aaPredicted RBP34.77■■■■□ 3.16
HOXB3-207ENST00000472863 THSD7AQ9UPZ6 1657 aa34.76■■■■□ 3.16
HOXB3-207ENST00000472863 RBM42Q9BTD8 480 aaKnown RBP34.75■■■■□ 3.15
HOXB3-207ENST00000472863 PI4KAP2A4QPH2 592 aa34.75■■■■□ 3.15
HOXB3-207ENST00000472863 CCT4P50991 539 aaKnown RBP34.75■■■■□ 3.15
HOXB3-207ENST00000472863 PI4KAP1Q8N8J0 262 aa34.75■■■■□ 3.15
HOXB3-207ENST00000472863 ONECUT3O60422 494 aaPredicted RBP34.74■■■■□ 3.15
HOXB3-207ENST00000472863 CHMP4BQ9H444 224 aaKnown RBP34.74■■■■□ 3.15
HOXB3-207ENST00000472863 CENPQQ7L2Z9 268 aaPredicted RBP34.73■■■■□ 3.15
HOXB3-207ENST00000472863 KCNQ2O43526 872 aa34.73■■■■□ 3.15
HOXB3-207ENST00000472863 AIMP1Q12904 312 aaKnown RBP34.73■■■■□ 3.15
HOXB3-207ENST00000472863 LRP10Q7Z4F1 713 aa34.72■■■■□ 3.15
HOXB3-207ENST00000472863 C1orf115Q9H7X2 142 aa34.72■■■■□ 3.15
HOXB3-207ENST00000472863 LAMB4A4D0S4 1761 aa34.72■■■■□ 3.15
HOXB3-207ENST00000472863 ADCY9O60503 1353 aa34.71■■■■□ 3.15
HOXB3-207ENST00000472863 VSIG10Q8N0Z9 540 aa34.7■■■■□ 3.15
HOXB3-207ENST00000472863 SLC4A9Q96Q91 983 aa34.7■■■■□ 3.15
HOXB3-207ENST00000472863 A1BGP04217 495 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 FAM182BQ5T319 152 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 DNAAF4Q8WXU2 420 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 NBPF26B4DH59 902 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 NBPF14Q5TI25 921 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 NBPF10Q6P3W6 841 aaKnown RBP34.69■■■■□ 3.14
HOXB3-207ENST00000472863 DNAJC10Q8IXB1 793 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 SEPT12Q8IYM1 358 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 NBPF15Q8N660 670 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 XAGE3Q8WTP9 111 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 MEIS3Q99687 375 aa34.69■■■■□ 3.14
HOXB3-207ENST00000472863 KSR2Q6VAB6 950 aa34.68■■■■□ 3.14
HOXB3-207ENST00000472863 COPS6Q7L5N1 327 aa34.68■■■■□ 3.14
HOXB3-207ENST00000472863 MAP3K2Q9Y2U5 619 aa34.67■■■■□ 3.14
HOXB3-207ENST00000472863 PELP1Q8IZL8 1130 aaKnown RBP34.66■■■■□ 3.14
HOXB3-207ENST00000472863 RWDD1Q9H446 243 aaPredicted RBP34.65■■■■□ 3.14
HOXB3-207ENST00000472863 ERBB4Q15303 1308 aa34.65■■■■□ 3.14
HOXB3-207ENST00000472863 PXDNLA1KZ92 1463 aa34.64■■■■□ 3.14
HOXB3-207ENST00000472863 TEX13AQ9BXU3 409 aaPredicted RBP34.64■■■■□ 3.14
HOXB3-207ENST00000472863 DDX58O95786 925 aaKnown RBP34.63■■■■□ 3.13
HOXB3-207ENST00000472863 BEND3Q5T5X7 828 aa34.63■■■■□ 3.13
HOXB3-207ENST00000472863 SKAP1Q86WV1 359 aa34.62■■■■□ 3.13
HOXB3-207ENST00000472863 SRCIN1Q9C0H9 1055 aa34.62■■■■□ 3.13
HOXB3-207ENST00000472863 PTF1AQ7RTS3 328 aa34.61■■■■□ 3.13
HOXB3-207ENST00000472863 HDAC1Q13547 482 aaPredicted RBP34.61■■■■□ 3.13
HOXB3-207ENST00000472863 RIC3Q7Z5B4 369 aa34.6■■■■□ 3.13
HOXB3-207ENST00000472863 FBXO41Q8TF61 875 aa34.6■■■■□ 3.13
HOXB3-207ENST00000472863 N4BP2Q86UW6 1770 aaPredicted RBP34.59■■■■□ 3.13
HOXB3-207ENST00000472863 STARD3NLO95772 234 aa34.59■■■■□ 3.13
HOXB3-207ENST00000472863 ANKRD13DQ6ZTN6 518 aa34.59■■■■□ 3.13
HOXB3-207ENST00000472863 SIRT2Q8IXJ6 389 aa34.58■■■■□ 3.13
HOXB3-207ENST00000472863 USP44Q9H0E7 712 aa34.58■■■■□ 3.13
HOXB3-207ENST00000472863 ZNF772Q68DY9 489 aaPredicted RBP34.57■■■■□ 3.13
HOXB3-207ENST00000472863 CYP19A1P11511 503 aaPredicted RBP34.57■■■■□ 3.12
HOXB3-207ENST00000472863 ATP10DQ9P241 1426 aa34.56■■■■□ 3.12
HOXB3-207ENST00000472863 LOC102724428A0A0B4J2F2 783 aa34.55■■■■□ 3.12
HOXB3-207ENST00000472863 SIK1P57059 783 aa34.55■■■■□ 3.12
HOXB3-207ENST00000472863 PALLDQ8WX93 1383 aa34.55■■■■□ 3.12
HOXB3-207ENST00000472863 TTLL7Q6ZT98 887 aa34.54■■■■□ 3.12
HOXB3-207ENST00000472863 CWF19L2Q2TBE0 894 aaKnown RBP34.53■■■■□ 3.12
HOXB3-207ENST00000472863 SMARCC1Q92922 1105 aaPredicted RBP34.53■■■■□ 3.12
HOXB3-207ENST00000472863 GNAI3P08754 354 aa34.53■■■■□ 3.12
HOXB3-207ENST00000472863 ATP6V1AP38606 617 aa34.53■■■■□ 3.12
HOXB3-207ENST00000472863 TJP1Q07157 1748 aa34.51■■■■□ 3.11
HOXB3-207ENST00000472863 LINS1Q8NG48 757 aa34.51■■■■□ 3.11
HOXB3-207ENST00000472863 METTL22Q9BUU2 404 aaPredicted RBP34.51■■■■□ 3.11
HOXB3-207ENST00000472863 ZNF330Q9Y3S2 320 aaPredicted RBP34.51■■■■□ 3.11
HOXB3-207ENST00000472863 GNAI2P04899 355 aa34.5■■■■□ 3.11
HOXB3-207ENST00000472863 CEP85Q6P2H3 762 aa34.5■■■■□ 3.11
HOXB3-207ENST00000472863 PLBD2Q8NHP8 589 aa34.5■■■■□ 3.11
HOXB3-207ENST00000472863 ALDH1L1O75891 902 aa34.49■■■■□ 3.11
HOXB3-207ENST00000472863 RBM6P78332 1123 aaKnown RBP34.49■■■■□ 3.11
HOXB3-207ENST00000472863 IGKV5-2P06315 115 aa34.49■■■■□ 3.11
HOXB3-207ENST00000472863 NBPF7P0C2Y1 421 aaPredicted RBP34.49■■■■□ 3.11
HOXB3-207ENST00000472863 ANKRD44Q8N8A2 993 aa34.49■■■■□ 3.11
HOXB3-207ENST00000472863 MYD88Q99836 296 aa34.49■■■■□ 3.11
HOXB3-207ENST00000472863 ITPK1Q13572 414 aa34.48■■■■□ 3.11
HOXB3-207ENST00000472863 RPAP2Q8IXW5 612 aaPredicted RBP34.48■■■■□ 3.11
HOXB3-207ENST00000472863 UBTFL1P0CB47 393 aaPredicted RBP34.47■■■■□ 3.11
HOXB3-207ENST00000472863 ZBTB1Q9Y2K1 713 aa34.47■■■■□ 3.11
HOXB3-207ENST00000472863 NEXNQ0ZGT2 675 aa34.46■■■■□ 3.11
HOXB3-207ENST00000472863 KRT27Q7Z3Y8 459 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms