RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
SMC4-213ENST00000472282 SPON1Q9HCB6 807 aa12.52□□□□□ -0.41
SMC4-213ENST00000472282 STK32BQ9NY57 414 aa12.52□□□□□ -0.41
SMC4-213ENST00000472282 KIF24Q5T7B8 1368 aa12.52□□□□□ -0.41
SMC4-213ENST00000472282 C5P01031 1676 aa12.51□□□□□ -0.41
SMC4-213ENST00000472282 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
SMC4-213ENST00000472282 KCNQ4P56696 695 aa12.51□□□□□ -0.41
SMC4-213ENST00000472282 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
SMC4-213ENST00000472282 ZNF316A6NFI3 1004 aaPredicted RBP12.5□□□□□ -0.41
SMC4-213ENST00000472282 SYTL4Q96C24 671 aaPredicted RBP12.5□□□□□ -0.41
SMC4-213ENST00000472282 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
SMC4-213ENST00000472282 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
SMC4-213ENST00000472282 PTGER2P43116 358 aa12.49□□□□□ -0.41
SMC4-213ENST00000472282 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
SMC4-213ENST00000472282 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
SMC4-213ENST00000472282 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
SMC4-213ENST00000472282 POLKQ9UBT6 870 aa12.48□□□□□ -0.41
SMC4-213ENST00000472282 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
SMC4-213ENST00000472282 CYP27B1O15528 508 aa12.47□□□□□ -0.41
SMC4-213ENST00000472282 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
SMC4-213ENST00000472282 SLC34A2O95436 690 aa12.46□□□□□ -0.41
SMC4-213ENST00000472282 EYA1Q99502 592 aa12.46□□□□□ -0.41
SMC4-213ENST00000472282 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.41
SMC4-213ENST00000472282 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
SMC4-213ENST00000472282 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
SMC4-213ENST00000472282 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
SMC4-213ENST00000472282 PNPLA7Q6ZV29 1317 aa12.44□□□□□ -0.42
SMC4-213ENST00000472282 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
SMC4-213ENST00000472282 EIF4A2Q14240 407 aaKnown RBP12.44□□□□□ -0.42
SMC4-213ENST00000472282 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
SMC4-213ENST00000472282 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
SMC4-213ENST00000472282 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.423e-15■■■■■ 43.1
SMC4-213ENST00000472282 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
SMC4-213ENST00000472282 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
SMC4-213ENST00000472282 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
SMC4-213ENST00000472282 FHDC1Q9C0D6 1143 aaPredicted RBP12.42□□□□□ -0.42
SMC4-213ENST00000472282 CCNL1Q9UK58 526 aaPredicted RBP12.42□□□□□ -0.42
SMC4-213ENST00000472282 CHD4Q14839 1912 aa12.41□□□□□ -0.42
SMC4-213ENST00000472282 NUDT7P0C024 238 aa12.41□□□□□ -0.42
SMC4-213ENST00000472282 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
SMC4-213ENST00000472282 MPRIPQ6WCQ1 1025 aa12.41□□□□□ -0.42
SMC4-213ENST00000472282 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
SMC4-213ENST00000472282 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
SMC4-213ENST00000472282 PPP1R37O75864 691 aa12.4□□□□□ -0.42
SMC4-213ENST00000472282 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
SMC4-213ENST00000472282 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
SMC4-213ENST00000472282 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
SMC4-213ENST00000472282 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
SMC4-213ENST00000472282 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
SMC4-213ENST00000472282 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
SMC4-213ENST00000472282 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
SMC4-213ENST00000472282 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
SMC4-213ENST00000472282 PIGBQ92521 554 aa12.39□□□□□ -0.43
SMC4-213ENST00000472282 TFCP2L1Q9NZI6 479 aa12.39□□□□□ -0.43
SMC4-213ENST00000472282 COL5A3P25940 1745 aaPredicted RBP12.39□□□□□ -0.43
SMC4-213ENST00000472282 PHKG2P15735 406 aa12.38□□□□□ -0.43
SMC4-213ENST00000472282 PBX2P40425 430 aa12.38□□□□□ -0.43
SMC4-213ENST00000472282 AMIGO3Q86WK7 504 aa12.38□□□□□ -0.43
SMC4-213ENST00000472282 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
SMC4-213ENST00000472282 ARXQ96QS3 562 aa12.38□□□□□ -0.43
SMC4-213ENST00000472282 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
SMC4-213ENST00000472282 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
SMC4-213ENST00000472282 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
SMC4-213ENST00000472282 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
SMC4-213ENST00000472282 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
SMC4-213ENST00000472282 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
SMC4-213ENST00000472282 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
SMC4-213ENST00000472282 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
SMC4-213ENST00000472282 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
SMC4-213ENST00000472282 MAP3K5Q99683 1374 aa12.35□□□□□ -0.43
SMC4-213ENST00000472282 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
SMC4-213ENST00000472282 MYH14Q7Z406 1995 aaKnown RBP12.35□□□□□ -0.43
SMC4-213ENST00000472282 YY1P25490 414 aa12.34□□□□□ -0.43
SMC4-213ENST00000472282 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.437e-97■■■■■ 245.7
SMC4-213ENST00000472282 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
SMC4-213ENST00000472282 LHX6Q9UPM6 363 aa12.34□□□□□ -0.43
SMC4-213ENST00000472282 C4AP0C0L4 1744 aa12.34□□□□□ -0.43
SMC4-213ENST00000472282 TJP1Q07157 1748 aa12.34□□□□□ -0.43
SMC4-213ENST00000472282 IL13P35225 146 aa12.33□□□□□ -0.44
SMC4-213ENST00000472282 ITPK1Q13572 414 aa12.33□□□□□ -0.44
SMC4-213ENST00000472282 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
SMC4-213ENST00000472282 SMARCC1Q92922 1105 aaPredicted RBP12.33□□□□□ -0.44
SMC4-213ENST00000472282 ATG3Q9NT62 314 aa12.33□□□□□ -0.44
SMC4-213ENST00000472282 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
SMC4-213ENST00000472282 KDRP35968 1356 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 SIK1P57059 783 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 SULT6B1Q6IMI4 303 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
SMC4-213ENST00000472282 POLD1P28340 1107 aa12.31□□□□□ -0.44
SMC4-213ENST00000472282 MTHFSP49914 203 aa12.31□□□□□ -0.44
SMC4-213ENST00000472282 FOXK1P85037 733 aa12.31□□□□□ -0.44
SMC4-213ENST00000472282 ZNF530Q6P9A1 599 aaPredicted RBP12.31□□□□□ -0.44
SMC4-213ENST00000472282 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
SMC4-213ENST00000472282 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
SMC4-213ENST00000472282 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
SMC4-213ENST00000472282 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
SMC4-213ENST00000472282 COL3A1P02461 1466 aaPredicted RBP12.3□□□□□ -0.44
SMC4-213ENST00000472282 TBC1D12O60347 775 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms