RNA–Protein interactions for RNA: ENST00000471143.5

TSC2-212, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-212ENST00000471143 PARP3Q9Y6F1 533 aa15.94■□□□□ 0.14
TSC2-212ENST00000471143 TAF7Q15545 349 aaPredicted RBP15.93■□□□□ 0.14
TSC2-212ENST00000471143 NARFQ9UHQ1 456 aa15.93■□□□□ 0.14
TSC2-212ENST00000471143 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
TSC2-212ENST00000471143 TGFB2P61812 414 aa15.92■□□□□ 0.14
TSC2-212ENST00000471143 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
TSC2-212ENST00000471143 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
TSC2-212ENST00000471143 A1BGP04217 495 aa15.91■□□□□ 0.14
TSC2-212ENST00000471143 DDR1Q08345 913 aa15.91■□□□□ 0.14
TSC2-212ENST00000471143 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
TSC2-212ENST00000471143 MYH14Q7Z406 1995 aaKnown RBP15.91■□□□□ 0.14
TSC2-212ENST00000471143 COL5A3P25940 1745 aaPredicted RBP15.91■□□□□ 0.14
TSC2-212ENST00000471143 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
TSC2-212ENST00000471143 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
TSC2-212ENST00000471143 SNRPA1P09661 255 aaKnown RBP15.9■□□□□ 0.14
TSC2-212ENST00000471143 MIS18AQ9NYP9 233 aa15.9■□□□□ 0.14
TSC2-212ENST00000471143 COL15A1P39059 1388 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 TJP1Q07157 1748 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 A0A087WZG4 1122 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
TSC2-212ENST00000471143 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
TSC2-212ENST00000471143 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
TSC2-212ENST00000471143 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 CICQ96RK0 1608 aaPredicted RBP15.89■□□□□ 0.13
TSC2-212ENST00000471143 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
TSC2-212ENST00000471143 NFIXQ14938 502 aa15.88■□□□□ 0.13
TSC2-212ENST00000471143 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
TSC2-212ENST00000471143 DPEP1P16444 411 aa15.87■□□□□ 0.13
TSC2-212ENST00000471143 KCNA3P22001 575 aa15.87■□□□□ 0.13
TSC2-212ENST00000471143 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
TSC2-212ENST00000471143 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
TSC2-212ENST00000471143 C10orf71Q711Q0 1435 aa15.86■□□□□ 0.13
TSC2-212ENST00000471143 RIPK4P57078 832 aa15.86■□□□□ 0.13
TSC2-212ENST00000471143 PXDNLA1KZ92 1463 aa15.85■□□□□ 0.13
TSC2-212ENST00000471143 TMPOP42166 694 aaKnown RBP15.85■□□□□ 0.13
TSC2-212ENST00000471143 ADAMTS8Q9UP79 889 aa15.85■□□□□ 0.13
TSC2-212ENST00000471143 ZNF330Q9Y3S2 320 aaPredicted RBP15.85■□□□□ 0.13
TSC2-212ENST00000471143 SERPINB2P05120 415 aa15.84■□□□□ 0.13
TSC2-212ENST00000471143 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
TSC2-212ENST00000471143 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
TSC2-212ENST00000471143 NPM2Q86SE8 214 aaKnown RBP15.84■□□□□ 0.13
TSC2-212ENST00000471143 NBPF26B4DH59 902 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 GIGYF1O75420 1035 aaPredicted RBP15.83■□□□□ 0.12
TSC2-212ENST00000471143 CAMTA2O94983 1202 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
TSC2-212ENST00000471143 TBC1D9BQ66K14 1250 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
TSC2-212ENST00000471143 BICDL1Q6ZP65 573 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 BCS1LQ9Y276 419 aa15.83■□□□□ 0.12
TSC2-212ENST00000471143 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
TSC2-212ENST00000471143 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
TSC2-212ENST00000471143 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
TSC2-212ENST00000471143 PIM2Q9P1W9 311 aa15.82■□□□□ 0.12
TSC2-212ENST00000471143 CHRNA5P30532 468 aa15.81■□□□□ 0.12
TSC2-212ENST00000471143 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
TSC2-212ENST00000471143 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
TSC2-212ENST00000471143 C4AP0C0L4 1744 aa15.8■□□□□ 0.12
TSC2-212ENST00000471143 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
TSC2-212ENST00000471143 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
TSC2-212ENST00000471143 ZNF316A6NFI3 1004 aaPredicted RBP15.79■□□□□ 0.12
TSC2-212ENST00000471143 CLEC4GQ6UXB4 293 aa15.79■□□□□ 0.12
TSC2-212ENST00000471143 SETDB2Q96T68 719 aa15.79■□□□□ 0.12
TSC2-212ENST00000471143 BABAM1Q9NWV8 329 aa15.79■□□□□ 0.12
TSC2-212ENST00000471143 TSPYL4Q9UJ04 414 aa15.79■□□□□ 0.12
TSC2-212ENST00000471143 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
TSC2-212ENST00000471143 DALRD3Q5D0E6 543 aaKnown RBP15.78■□□□□ 0.12
TSC2-212ENST00000471143 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
TSC2-212ENST00000471143 CHL1O00533 1208 aa15.76■□□□□ 0.11
TSC2-212ENST00000471143 RGL2O15211 777 aa15.76■□□□□ 0.11
TSC2-212ENST00000471143 PRR5LQ6MZQ0 368 aa15.76■□□□□ 0.11
TSC2-212ENST00000471143 BRIP1Q9BX63 1249 aa15.76■□□□□ 0.11
TSC2-212ENST00000471143 VIRMAQ69YN4 1812 aaKnown RBP15.75■□□□□ 0.11
TSC2-212ENST00000471143 HLFQ16534 295 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 C2CD5Q86YS7 1000 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 CCDC24Q8N4L8 307 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 ZNF652Q9Y2D9 606 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
TSC2-212ENST00000471143 H0YIN7 160 aa15.74■□□□□ 0.11
TSC2-212ENST00000471143 CCDC184Q52MB2 194 aa15.74■□□□□ 0.11
TSC2-212ENST00000471143 KIF13BQ9NQT8 1826 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 ERVV-1B6SEH8 477 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 APAF1O14727 1248 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 MYL6BP14649 208 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 PDE6BP35913 854 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 TTLL6Q8N841 843 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 PDZRN3Q9UPQ7 1066 aa15.73■□□□□ 0.11
TSC2-212ENST00000471143 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
TSC2-212ENST00000471143 PDIA6Q15084 440 aa15.72■□□□□ 0.11
TSC2-212ENST00000471143 TTLL7Q6ZT98 887 aa15.72■□□□□ 0.11
TSC2-212ENST00000471143 NBPF5PQ86XG9 351 aaPredicted RBP15.72■□□□□ 0.11
TSC2-212ENST00000471143 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
TSC2-212ENST00000471143 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
TSC2-212ENST00000471143 ADCY9O60503 1353 aa15.72■□□□□ 0.11
TSC2-212ENST00000471143 KIAA1551Q9HCM1 1747 aa15.71■□□□□ 0.11
TSC2-212ENST00000471143 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms