RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 GPR162Q16538 588 aa20.75■□□□□ 0.91
HDAC6-218ENST00000470942 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
HDAC6-218ENST00000470942 CD2APQ9Y5K6 639 aa20.75■□□□□ 0.91
HDAC6-218ENST00000470942 SOS1Q07889 1333 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-218ENST00000470942 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-218ENST00000470942 ZPR1O75312 459 aa20.73■□□□□ 0.91
HDAC6-218ENST00000470942 USP42Q9H9J4 1324 aaKnown RBP20.73■□□□□ 0.91
HDAC6-218ENST00000470942 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
HDAC6-218ENST00000470942 COL15A1P39059 1388 aa20.72■□□□□ 0.91
HDAC6-218ENST00000470942 RIPK4P57078 832 aa20.71■□□□□ 0.91
HDAC6-218ENST00000470942 USPL1Q5W0Q7 1092 aa20.71■□□□□ 0.91
HDAC6-218ENST00000470942 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
HDAC6-218ENST00000470942 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
HDAC6-218ENST00000470942 FKBP8Q14318 412 aa20.7■□□□□ 0.9
HDAC6-218ENST00000470942 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
HDAC6-218ENST00000470942 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-218ENST00000470942 YY1P25490 414 aa20.69■□□□□ 0.9
HDAC6-218ENST00000470942 NARFQ9UHQ1 456 aa20.69■□□□□ 0.9
HDAC6-218ENST00000470942 A0A087WZG4 1122 aa20.68■□□□□ 0.9
HDAC6-218ENST00000470942 A1BGP04217 495 aa20.68■□□□□ 0.9
HDAC6-218ENST00000470942 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
HDAC6-218ENST00000470942 TMPOP42166 694 aaKnown RBP20.68■□□□□ 0.9
HDAC6-218ENST00000470942 NPM2Q86SE8 214 aaKnown RBP20.68■□□□□ 0.9
HDAC6-218ENST00000470942 PNISRQ8TF01 805 aaKnown RBP20.68■□□□□ 0.9
HDAC6-218ENST00000470942 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
HDAC6-218ENST00000470942 USP16Q9Y5T5 823 aa20.68■□□□□ 0.9
HDAC6-218ENST00000470942 CHD4Q14839 1912 aa20.67■□□□□ 0.9
HDAC6-218ENST00000470942 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
HDAC6-218ENST00000470942 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
HDAC6-218ENST00000470942 NEUROD2Q15784 382 aa20.67■□□□□ 0.9
HDAC6-218ENST00000470942 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
HDAC6-218ENST00000470942 RRP7AQ9Y3A4 280 aaKnown RBP20.67■□□□□ 0.9
HDAC6-218ENST00000470942 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
HDAC6-218ENST00000470942 IL6STP40189 918 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-218ENST00000470942 LMOD3Q0VAK6 560 aa20.65■□□□□ 0.9
HDAC6-218ENST00000470942 KIF13BQ9NQT8 1826 aa20.64■□□□□ 0.9
HDAC6-218ENST00000470942 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.89
HDAC6-218ENST00000470942 YBX3P16989 372 aaKnown RBP eCLIP20.63■□□□□ 0.89
HDAC6-218ENST00000470942 TM4SF1P30408 202 aa20.63■□□□□ 0.89
HDAC6-218ENST00000470942 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-218ENST00000470942 DDR1Q08345 913 aa20.63■□□□□ 0.89
HDAC6-218ENST00000470942 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
HDAC6-218ENST00000470942 N4BP2Q86UW6 1770 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-218ENST00000470942 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
HDAC6-218ENST00000470942 BCL2L12Q9HB09 334 aa20.62■□□□□ 0.89
HDAC6-218ENST00000470942 C10orf71Q711Q0 1435 aa20.61■□□□□ 0.89
HDAC6-218ENST00000470942 POLRMTO00411 1230 aaKnown RBP20.61■□□□□ 0.89
HDAC6-218ENST00000470942 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
HDAC6-218ENST00000470942 NFIXQ14938 502 aa20.61■□□□□ 0.89
HDAC6-218ENST00000470942 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
HDAC6-218ENST00000470942 LAMB4A4D0S4 1761 aa20.6■□□□□ 0.89
HDAC6-218ENST00000470942 ANP32CO43423 234 aa20.6■□□□□ 0.89
HDAC6-218ENST00000470942 TGFB2P61812 414 aa20.6■□□□□ 0.89
HDAC6-218ENST00000470942 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
HDAC6-218ENST00000470942 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
HDAC6-218ENST00000470942 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
HDAC6-218ENST00000470942 KIAA1551Q9HCM1 1747 aa20.58■□□□□ 0.89
HDAC6-218ENST00000470942 SCN7AQ01118 1682 aa20.58■□□□□ 0.89
HDAC6-218ENST00000470942 PXDNLA1KZ92 1463 aa20.58■□□□□ 0.89
HDAC6-218ENST00000470942 GIGYF1O75420 1035 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-218ENST00000470942 DZIP3Q86Y13 1208 aaKnown RBP20.58■□□□□ 0.89
HDAC6-218ENST00000470942 UTRNP46939 3433 aa20.58■□□□□ 0.88
HDAC6-218ENST00000470942 SERPINB2P05120 415 aa20.57■□□□□ 0.88
HDAC6-218ENST00000470942 DPEP1P16444 411 aa20.57■□□□□ 0.88
HDAC6-218ENST00000470942 CCDC184Q52MB2 194 aa20.57■□□□□ 0.88
HDAC6-218ENST00000470942 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
HDAC6-218ENST00000470942 GOLGB1Q14789 3259 aaKnown RBP20.57■□□□□ 0.88
HDAC6-218ENST00000470942 NBPF26B4DH59 902 aa20.56■□□□□ 0.88
HDAC6-218ENST00000470942 CAMTA2O94983 1202 aa20.56■□□□□ 0.88
HDAC6-218ENST00000470942 TBC1D9BQ66K14 1250 aa20.56■□□□□ 0.88
HDAC6-218ENST00000470942 NBPF10Q6P3W6 841 aaKnown RBP20.56■□□□□ 0.88
HDAC6-218ENST00000470942 NBPF15Q8N660 670 aa20.56■□□□□ 0.88
HDAC6-218ENST00000470942 BABAM1Q9NWV8 329 aa20.56■□□□□ 0.88
HDAC6-218ENST00000470942 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
HDAC6-218ENST00000470942 BCORQ6W2J9 1755 aa20.55■□□□□ 0.88
HDAC6-218ENST00000470942 APAF1O14727 1248 aa20.54■□□□□ 0.88
HDAC6-218ENST00000470942 NRXN2Q9P2S2 1712 aa20.53■□□□□ 0.88
HDAC6-218ENST00000470942 NGEFQ8N5V2 710 aa20.53■□□□□ 0.88
HDAC6-218ENST00000470942 BCS1LQ9Y276 419 aa20.53■□□□□ 0.88
HDAC6-218ENST00000470942 SETDB2Q96T68 719 aa20.52■□□□□ 0.88
HDAC6-218ENST00000470942 MRS2Q9HD23 443 aa20.52■□□□□ 0.88
HDAC6-218ENST00000470942 BRCA1P38398 1863 aaKnown RBP20.52■□□□□ 0.87
HDAC6-218ENST00000470942 MYL6BP14649 208 aa20.51■□□□□ 0.87
HDAC6-218ENST00000470942 EIF2S2P20042 333 aaKnown RBP20.51■□□□□ 0.87
HDAC6-218ENST00000470942 CHRNA5P30532 468 aa20.51■□□□□ 0.87
HDAC6-218ENST00000470942 ZNF652Q9Y2D9 606 aa20.51■□□□□ 0.87
HDAC6-218ENST00000470942 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 CHL1O00533 1208 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 NPHP1O15259 732 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 KCNA3P22001 575 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 CLEC4GQ6UXB4 293 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 PIM2Q9P1W9 311 aa20.5■□□□□ 0.87
HDAC6-218ENST00000470942 DALRD3Q5D0E6 543 aaKnown RBP20.47■□□□□ 0.87
HDAC6-218ENST00000470942 PRR5LQ6MZQ0 368 aa20.47■□□□□ 0.87
HDAC6-218ENST00000470942 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
HDAC6-218ENST00000470942 ZNF784Q8NCA9 323 aaPredicted RBP20.47■□□□□ 0.87
HDAC6-218ENST00000470942 CFAP44Q96MT7 982 aa20.47■□□□□ 0.87
HDAC6-218ENST00000470942 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
HDAC6-218ENST00000470942 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
HDAC6-218ENST00000470942 HLFQ16534 295 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms