RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 POLKQ9UBT6 870 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 DLEC1Q9Y238 1755 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 NRXN2Q9P2S2 1712 aa9.41□□□□□ -0.9
SF3A3-205ENST00000470585 POLRMTO00411 1230 aaKnown RBP9.4□□□□□ -0.9
SF3A3-205ENST00000470585 HSPA1AP0DMV8 641 aaKnown RBP9.4□□□□□ -0.9
SF3A3-205ENST00000470585 HSPA1BP0DMV9 641 aaKnown RBP9.4□□□□□ -0.9
SF3A3-205ENST00000470585 CABP4P57796 275 aa9.4□□□□□ -0.9
SF3A3-205ENST00000470585 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 ZPR1O75312 459 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 DDR1Q08345 913 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
SF3A3-205ENST00000470585 DPY19L2Q6NUT2 758 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 PRDM10Q9NQV6 1147 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
SF3A3-205ENST00000470585 LTBP3Q9NS15 1303 aa9.38□□□□□ -0.91
SF3A3-205ENST00000470585 HAX1O00165 279 aa9.38□□□□□ -0.91
SF3A3-205ENST00000470585 PPM1GO15355 546 aaPredicted RBP9.38□□□□□ -0.91
SF3A3-205ENST00000470585 FKBP8Q14318 412 aa9.38□□□□□ -0.91
SF3A3-205ENST00000470585 C1orf141Q5JVX7 400 aa9.38□□□□□ -0.91
SF3A3-205ENST00000470585 TTLL6Q8N841 843 aa9.38□□□□□ -0.91
SF3A3-205ENST00000470585 DICER1Q9UPY3 1922 aaKnown RBP9.38□□□□□ -0.91
SF3A3-205ENST00000470585 TJP1Q07157 1748 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 MRC1P22897 1456 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 MTHFSP49914 203 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 HTRA3P83110 453 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
SF3A3-205ENST00000470585 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 TIMELESSQ9UNS1 1208 aa9.37□□□□□ -0.91
SF3A3-205ENST00000470585 TIAM2Q8IVF5 1701 aa9.36□□□□□ -0.91
SF3A3-205ENST00000470585 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
SF3A3-205ENST00000470585 SOGA3Q5TF21 947 aa9.36□□□□□ -0.91
SF3A3-205ENST00000470585 INTS5Q6P9B9 1019 aaKnown RBP9.36□□□□□ -0.91
SF3A3-205ENST00000470585 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
SF3A3-205ENST00000470585 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
SF3A3-205ENST00000470585 SCN11AQ9UI33 1791 aa9.36□□□□□ -0.91
SF3A3-205ENST00000470585 AFDNP55196 1824 aaKnown RBP9.35□□□□□ -0.91
SF3A3-205ENST00000470585 H0YIN7 160 aa9.35□□□□□ -0.91
SF3A3-205ENST00000470585 PTCD1O75127 700 aaKnown RBP9.35□□□□□ -0.91
SF3A3-205ENST00000470585 SLC34A2O95436 690 aa9.35□□□□□ -0.91
SF3A3-205ENST00000470585 CHRNA5P30532 468 aa9.35□□□□□ -0.91
SF3A3-205ENST00000470585 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
SF3A3-205ENST00000470585 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 NFIXQ14938 502 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 CHADLQ6NUI6 762 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 COL15A1P39059 1388 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 CNTNAP1P78357 1384 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
SF3A3-205ENST00000470585 SCN4AP35499 1836 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 A0A087WZG4 1122 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 NFKBIEO00221 500 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 SERPINB2P05120 415 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 CYP19A1P11511 503 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-205ENST00000470585 PDE6BP35913 854 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 CTCFP49711 727 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-205ENST00000470585 RASSF7Q02833 373 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
SF3A3-205ENST00000470585 BRIP1Q9BX63 1249 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 SLC52A2Q9HAB3 445 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 CCDC88AQ3V6T2 1871 aa9.33□□□□□ -0.92
SF3A3-205ENST00000470585 POTECB2RU33 542 aa9.32□□□□□ -0.92
SF3A3-205ENST00000470585 LDHDQ86WU2 507 aa9.32□□□□□ -0.92
SF3A3-205ENST00000470585 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
SF3A3-205ENST00000470585 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 RGL2O15211 777 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 STARD3NLO95772 234 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 ERFEQ4G0M1 354 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 C2CD5Q86YS7 1000 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 CNKSR1Q969H4 720 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 TEX13AQ9BXU3 409 aaPredicted RBP9.31□□□□□ -0.92
SF3A3-205ENST00000470585 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
SF3A3-205ENST00000470585 UBR2Q8IWV8 1755 aa9.3□□□□□ -0.92
SF3A3-205ENST00000470585 ARFGEF2Q9Y6D5 1785 aa9.3□□□□□ -0.92
SF3A3-205ENST00000470585 STYK1Q6J9G0 422 aa9.3□□□□□ -0.92
SF3A3-205ENST00000470585 DNAJC10Q8IXB1 793 aa9.3□□□□□ -0.92
SF3A3-205ENST00000470585 TAOK3Q9H2K8 898 aa9.3□□□□□ -0.92
SF3A3-205ENST00000470585 TMEM88BA6NKF7 163 aa9.29□□□□□ -0.92
SF3A3-205ENST00000470585 FOXN1O15353 648 aa9.29□□□□□ -0.92
SF3A3-205ENST00000470585 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
SF3A3-205ENST00000470585 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
SF3A3-205ENST00000470585 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
SF3A3-205ENST00000470585 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
SF3A3-205ENST00000470585 SCN7AQ01118 1682 aa9.29□□□□□ -0.92
SF3A3-205ENST00000470585 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
SF3A3-205ENST00000470585 ANKRD31Q8N7Z5 1873 aa9.28□□□□□ -0.92
SF3A3-205ENST00000470585 RASSF10A6NK89 507 aa9.28□□□□□ -0.92
SF3A3-205ENST00000470585 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
SF3A3-205ENST00000470585 SULT6B1Q6IMI4 303 aa9.28□□□□□ -0.92
SF3A3-205ENST00000470585 PNMA8AQ86V59 439 aaPredicted RBP9.28□□□□□ -0.92
SF3A3-205ENST00000470585 ZBTB1Q9Y2K1 713 aa9.28□□□□□ -0.92
SF3A3-205ENST00000470585 CLSPNQ9HAW4 1339 aa9.28□□□□□ -0.92
SF3A3-205ENST00000470585 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
SF3A3-205ENST00000470585 IL13P35225 146 aa9.27□□□□□ -0.93
SF3A3-205ENST00000470585 IL6STP40189 918 aaPredicted RBP9.27□□□□□ -0.93
SF3A3-205ENST00000470585 MASTLQ96GX5 879 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms