RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 COL15A1P39059 1388 aa16.95■□□□□ 0.3
SEC23IP-205ENST00000470478 DIAPH1O60610 1272 aaKnown RBP16.95■□□□□ 0.3
SEC23IP-205ENST00000470478 CHRNA5P30532 468 aa16.95■□□□□ 0.3
SEC23IP-205ENST00000470478 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
SEC23IP-205ENST00000470478 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
SEC23IP-205ENST00000470478 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
SEC23IP-205ENST00000470478 PIM2Q9P1W9 311 aa16.93■□□□□ 0.3
SEC23IP-205ENST00000470478 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
SEC23IP-205ENST00000470478 NFIXQ14938 502 aa16.92■□□□□ 0.3
SEC23IP-205ENST00000470478 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
SEC23IP-205ENST00000470478 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
SEC23IP-205ENST00000470478 ZPR1O75312 459 aa16.91■□□□□ 0.3
SEC23IP-205ENST00000470478 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
SEC23IP-205ENST00000470478 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
SEC23IP-205ENST00000470478 ANKRD31Q8N7Z5 1873 aa16.9■□□□□ 0.3
SEC23IP-205ENST00000470478 CARMIL3Q8ND23 1372 aa16.9■□□□□ 0.3
SEC23IP-205ENST00000470478 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
SEC23IP-205ENST00000470478 VSIG10Q8N0Z9 540 aa16.9■□□□□ 0.3
SEC23IP-205ENST00000470478 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
SEC23IP-205ENST00000470478 U2SURPO15042 1029 aaKnown RBP16.88■□□□□ 0.29
SEC23IP-205ENST00000470478 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
SEC23IP-205ENST00000470478 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 CCDC88AQ3V6T2 1871 aa16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 TOMM70O94826 608 aa16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 TNRC6CQ9HCJ0 1690 aaKnown RBP16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
SEC23IP-205ENST00000470478 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 RASSF7Q02833 373 aa16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 WDR90Q96KV7 1748 aa16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 BCORQ6W2J9 1755 aa16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
SEC23IP-205ENST00000470478 TIAM2Q8IVF5 1701 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 SERPINB2P05120 415 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 PRELPP51888 382 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 GAS2L2Q8NHY3 880 aa16.85■□□□□ 0.29
SEC23IP-205ENST00000470478 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
SEC23IP-205ENST00000470478 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
SEC23IP-205ENST00000470478 KCNQ3O43525 872 aa16.83■□□□□ 0.28
SEC23IP-205ENST00000470478 TEFQ10587 303 aa16.83■□□□□ 0.28
SEC23IP-205ENST00000470478 RSPH6AQ9H0K4 717 aa16.83■□□□□ 0.28
SEC23IP-205ENST00000470478 STARD3NLO95772 234 aa16.82■□□□□ 0.28
SEC23IP-205ENST00000470478 PRKAR2BP31323 418 aa16.82■□□□□ 0.28
SEC23IP-205ENST00000470478 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
SEC23IP-205ENST00000470478 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
SEC23IP-205ENST00000470478 APLP1P51693 650 aa16.81■□□□□ 0.28
SEC23IP-205ENST00000470478 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
SEC23IP-205ENST00000470478 RBM46Q8TBY0 533 aaKnown RBP16.81■□□□□ 0.28
SEC23IP-205ENST00000470478 CACNA1SQ13698 1873 aa16.81■□□□□ 0.28
SEC23IP-205ENST00000470478 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
SEC23IP-205ENST00000470478 A1BGP04217 495 aa16.8■□□□□ 0.28
SEC23IP-205ENST00000470478 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
SEC23IP-205ENST00000470478 DNAJC5GQ8N7S2 189 aa16.8■□□□□ 0.28
SEC23IP-205ENST00000470478 TBC1D2BQ9UPU7 963 aa16.8■□□□□ 0.28
SEC23IP-205ENST00000470478 KDM2BQ8NHM5 1336 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 DICER1Q9UPY3 1922 aaKnown RBP16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 A0A087WZG4 1122 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 NFKBIEO00221 500 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 CCDC24Q8N4L8 307 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 TTLL6Q8N841 843 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 FMNL2Q96PY5 1086 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 RRAGCQ9HB90 399 aa16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
SEC23IP-205ENST00000470478 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
SEC23IP-205ENST00000470478 CAMTA2O94983 1202 aa16.78■□□□□ 0.28
SEC23IP-205ENST00000470478 HTRA3P83110 453 aa16.78■□□□□ 0.28
SEC23IP-205ENST00000470478 PRR5LQ6MZQ0 368 aa16.78■□□□□ 0.28
SEC23IP-205ENST00000470478 ARFGEF2Q9Y6D5 1785 aa16.78■□□□□ 0.28
SEC23IP-205ENST00000470478 SLX4Q8IY92 1834 aa16.77■□□□□ 0.28
SEC23IP-205ENST00000470478 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
SEC23IP-205ENST00000470478 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
SEC23IP-205ENST00000470478 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.28
SEC23IP-205ENST00000470478 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
SEC23IP-205ENST00000470478 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
SEC23IP-205ENST00000470478 H0YIN7 160 aa16.76■□□□□ 0.27
SEC23IP-205ENST00000470478 LMNB1P20700 586 aa16.76■□□□□ 0.27
SEC23IP-205ENST00000470478 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
SEC23IP-205ENST00000470478 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
SEC23IP-205ENST00000470478 MCM10Q7L590 875 aa16.75■□□□□ 0.27
SEC23IP-205ENST00000470478 C16orf71Q8IYS4 520 aaPredicted RBP16.75■□□□□ 0.27
SEC23IP-205ENST00000470478 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
SEC23IP-205ENST00000470478 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
SEC23IP-205ENST00000470478 FSTL1Q12841 308 aa16.74■□□□□ 0.27
SEC23IP-205ENST00000470478 BRIP1Q9BX63 1249 aa16.74■□□□□ 0.27
SEC23IP-205ENST00000470478 U2AF1L5P0DN76 240 aaPredicted RBP16.73■□□□□ 0.27
SEC23IP-205ENST00000470478 U2AF1Q01081 240 aaKnown RBP eCLIP16.73■□□□□ 0.27
SEC23IP-205ENST00000470478 DCTN1Q14203 1278 aa16.73■□□□□ 0.27
SEC23IP-205ENST00000470478 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 GLTPD2A6NH11 291 aa16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 C21orf2O43822 256 aa16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 PDE6BP35913 854 aa16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 ZNF622Q969S3 477 aaKnown RBP eCLIP16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
SEC23IP-205ENST00000470478 CNBD1Q8NA66 436 aa16.71■□□□□ 0.27
SEC23IP-205ENST00000470478 SETDB2Q96T68 719 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms