RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 PHOX2BQ99453 314 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 CABP1Q9NZU7 370 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 TSR3Q9UJK0 312 aaKnown RBP8.95□□□□□ -0.98
VAMP3-202ENST00000470357 MYBBP1AQ9BQG0 1328 aaKnown RBP8.95□□□□□ -0.98
VAMP3-202ENST00000470357 A0A1W2PP64 1363 aa8.95□□□□□ -0.98
VAMP3-202ENST00000470357 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
VAMP3-202ENST00000470357 CPSF1Q10570 1443 aaKnown RBP8.95□□□□□ -0.98
VAMP3-202ENST00000470357 EDC4Q6P2E9 1401 aaKnown RBP8.95□□□□□ -0.98
VAMP3-202ENST00000470357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
VAMP3-202ENST00000470357 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 RNF40O75150 1001 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 PPP4CP60510 307 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 KRT28Q7Z3Y7 464 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 TMEM134Q9H6X4 195 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 CD163L1Q9NR16 1453 aa8.94□□□□□ -0.98
VAMP3-202ENST00000470357 BAG6P46379 1132 aa8.93□□□□□ -0.98
VAMP3-202ENST00000470357 CARD14Q9BXL6 1004 aa8.93□□□□□ -0.98
VAMP3-202ENST00000470357 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
VAMP3-202ENST00000470357 NRKQ7Z2Y5 1582 aa8.92□□□□□ -0.98
VAMP3-202ENST00000470357 DISP2A7MBM2 1401 aa8.92□□□□□ -0.98
VAMP3-202ENST00000470357 PRR36Q9H6K5 1346 aa8.92□□□□□ -0.98
VAMP3-202ENST00000470357 R3HDM1Q15032 1099 aaKnown RBP8.92□□□□□ -0.98
VAMP3-202ENST00000470357 CC2D1BQ5T0F9 858 aaKnown RBP8.92□□□□□ -0.98
VAMP3-202ENST00000470357 NLRP13Q86W25 1043 aa8.92□□□□□ -0.98
VAMP3-202ENST00000470357 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
VAMP3-202ENST00000470357 NWD2Q9ULI1 1742 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 TNS3Q68CZ2 1445 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 SBNO1A3KN83 1393 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 ACEP12821 1306 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 TTC21AQ8NDW8 1320 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 NGDNQ8NEJ9 315 aaKnown RBP8.91□□□□□ -0.98
VAMP3-202ENST00000470357 UTRNP46939 3433 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
VAMP3-202ENST00000470357 USP6P35125 1406 aa8.9□□□□□ -0.98
VAMP3-202ENST00000470357 FAM182BQ5T319 152 aa8.9□□□□□ -0.98
VAMP3-202ENST00000470357 MORC1Q86VD1 984 aa8.9□□□□□ -0.98
VAMP3-202ENST00000470357 CAMKK2Q96RR4 588 aa8.9□□□□□ -0.98
VAMP3-202ENST00000470357 MRS2Q9HD23 443 aa8.9□□□□□ -0.98
VAMP3-202ENST00000470357 CCDC9Q9Y3X0 531 aaKnown RBP8.9□□□□□ -0.98
VAMP3-202ENST00000470357 USP54Q70EL1 1684 aa8.89□□□□□ -0.99
VAMP3-202ENST00000470357 SLC4A3P48751 1232 aa8.89□□□□□ -0.99
VAMP3-202ENST00000470357 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
VAMP3-202ENST00000470357 NRAPQ86VF7 1730 aa8.88□□□□□ -0.99
VAMP3-202ENST00000470357 ABCA3Q99758 1704 aa8.88□□□□□ -0.99
VAMP3-202ENST00000470357 PSME1Q06323 249 aa8.88□□□□□ -0.99
VAMP3-202ENST00000470357 CNGB1Q14028 1251 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-202ENST00000470357 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
VAMP3-202ENST00000470357 DAXXQ9UER7 740 aaPredicted RBP8.88□□□□□ -0.99
VAMP3-202ENST00000470357 MAP2P11137 1827 aaKnown RBP8.88□□□□□ -0.99
VAMP3-202ENST00000470357 ARHGEF10O15013 1369 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 SPATA31A5Q5VU36 1347 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 SPATA31A7Q8IWB4 1347 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 FYB1O15117 783 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 YY1P25490 414 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 PPP2R1AP30153 589 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 COG3Q96JB2 828 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 CFAP53Q96M91 514 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 SSH2Q76I76 1423 aa8.87□□□□□ -0.99
VAMP3-202ENST00000470357 RGPD1P0DJD0 1748 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 TNS1Q9HBL0 1735 aaKnown RBP8.86□□□□□ -0.99
VAMP3-202ENST00000470357 THSD7AQ9UPZ6 1657 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 SLC10A3P09131 477 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 MDM2Q00987 491 aaPredicted RBP8.86□□□□□ -0.99
VAMP3-202ENST00000470357 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.86□□□□□ -0.99
VAMP3-202ENST00000470357 PMFBP1Q8TBY8 1022 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 INSRP06213 1382 aa8.86□□□□□ -0.99
VAMP3-202ENST00000470357 A0A0G2JS52 829 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 APLP1P51693 650 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 MYT1Q01538 1121 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 GGNBP2Q9H3C7 697 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 SLC24A3Q9HC58 644 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 AATKQ6ZMQ8 1374 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 USP31Q70CQ4 1352 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 PIK3C2AO00443 1686 aa8.85□□□□□ -0.99
VAMP3-202ENST00000470357 OVOS2A0A0J9YW53 1432 aa8.84□□□□□ -0.99
VAMP3-202ENST00000470357 TRIM37O94972 964 aa8.84□□□□□ -0.99
VAMP3-202ENST00000470357 OVOS2Q6IE36 1432 aa8.84□□□□□ -0.99
VAMP3-202ENST00000470357 TRPM3Q9HCF6 1732 aaPredicted RBP8.84□□□□□ -0.99
VAMP3-202ENST00000470357 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
VAMP3-202ENST00000470357 NME9Q86XW9 330 aa8.83□□□□□ -1
VAMP3-202ENST00000470357 PNISRQ8TF01 805 aaKnown RBP8.83□□□□□ -1
VAMP3-202ENST00000470357 NECTIN2Q92692 538 aa8.83□□□□□ -1
VAMP3-202ENST00000470357 AK7Q96M32 723 aa8.83□□□□□ -1
VAMP3-202ENST00000470357 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
VAMP3-202ENST00000470357 COL14A1Q05707 1796 aaKnown RBP8.83□□□□□ -1
VAMP3-202ENST00000470357 SPATA31A1Q5TZJ5 1347 aa8.82□□□□□ -1
VAMP3-202ENST00000470357 ALS2Q96Q42 1657 aa8.82□□□□□ -1
VAMP3-202ENST00000470357 APBA3O96018 575 aa8.82□□□□□ -1
VAMP3-202ENST00000470357 CENPBP07199 599 aaPredicted RBP8.82□□□□□ -1
VAMP3-202ENST00000470357 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
VAMP3-202ENST00000470357 RDH13Q8NBN7 331 aa8.82□□□□□ -1
VAMP3-202ENST00000470357 KIF24Q5T7B8 1368 aa8.82□□□□□ -1
VAMP3-202ENST00000470357 SMG6Q86US8 1419 aaKnown RBP8.81□□□□□ -1
VAMP3-202ENST00000470357 TRIM66O15016 1216 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms