RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 MSL1Q68DK7 614 aa23.41■■□□□ 1.34
LMNA-211ENST00000470199 MTFR1LQ9H019 292 aa23.41■■□□□ 1.34
LMNA-211ENST00000470199 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
LMNA-211ENST00000470199 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
LMNA-211ENST00000470199 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
LMNA-211ENST00000470199 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
LMNA-211ENST00000470199 A1BGP04217 495 aa23.39■■□□□ 1.33
LMNA-211ENST00000470199 SNRPA1P09661 255 aaKnown RBP23.39■■□□□ 1.33
LMNA-211ENST00000470199 SGIP1Q9BQI5 828 aa23.39■■□□□ 1.33
LMNA-211ENST00000470199 LRP5O75197 1615 aa23.39■■□□□ 1.33
LMNA-211ENST00000470199 CHL1O00533 1208 aa23.38■■□□□ 1.33
LMNA-211ENST00000470199 STARD3NLO95772 234 aa23.38■■□□□ 1.33
LMNA-211ENST00000470199 CANXP27824 592 aaKnown RBP23.38■■□□□ 1.33
LMNA-211ENST00000470199 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
LMNA-211ENST00000470199 TRAPPC3LQ5T215 181 aa23.38■■□□□ 1.33
LMNA-211ENST00000470199 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
LMNA-211ENST00000470199 KRT24Q2M2I5 525 aa23.37■■□□□ 1.33
LMNA-211ENST00000470199 TEX13AQ9BXU3 409 aaPredicted RBP23.37■■□□□ 1.33
LMNA-211ENST00000470199 SOS1Q07889 1333 aaPredicted RBP23.36■■□□□ 1.33
LMNA-211ENST00000470199 GIGYF1O75420 1035 aaPredicted RBP23.36■■□□□ 1.33
LMNA-211ENST00000470199 SRP68Q9UHB9 627 aaKnown RBP23.36■■□□□ 1.33
LMNA-211ENST00000470199 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
LMNA-211ENST00000470199 WWC1Q8IX03 1113 aa23.35■■□□□ 1.33
LMNA-211ENST00000470199 CFAP44Q96MT7 982 aa23.34■■□□□ 1.33
LMNA-211ENST00000470199 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
LMNA-211ENST00000470199 ADRA2BP18089 450 aa23.33■■□□□ 1.33
LMNA-211ENST00000470199 RFC4P35249 363 aa23.33■■□□□ 1.33
LMNA-211ENST00000470199 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
LMNA-211ENST00000470199 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
LMNA-211ENST00000470199 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
LMNA-211ENST00000470199 NBPF26B4DH59 902 aa23.31■■□□□ 1.32
LMNA-211ENST00000470199 EIF5P55010 431 aaKnown RBP23.31■■□□□ 1.32
LMNA-211ENST00000470199 NBPF10Q6P3W6 841 aaKnown RBP23.31■■□□□ 1.32
LMNA-211ENST00000470199 NBPF15Q8N660 670 aa23.31■■□□□ 1.32
LMNA-211ENST00000470199 ZNF330Q9Y3S2 320 aaPredicted RBP23.31■■□□□ 1.32
LMNA-211ENST00000470199 COL15A1P39059 1388 aa23.3■■□□□ 1.32
LMNA-211ENST00000470199 GYS1P13807 737 aa23.3■■□□□ 1.32
LMNA-211ENST00000470199 IFT57Q9NWB7 429 aa23.3■■□□□ 1.32
LMNA-211ENST00000470199 COL24A1Q17RW2 1714 aa23.3■■□□□ 1.32
LMNA-211ENST00000470199 PPP1R1BQ9UD71 204 aaPredicted RBP23.29■■□□□ 1.32
LMNA-211ENST00000470199 USP42Q9H9J4 1324 aaKnown RBP23.29■■□□□ 1.32
LMNA-211ENST00000470199 GNAI1P63096 354 aa23.28■■□□□ 1.32
LMNA-211ENST00000470199 USPL1Q5W0Q7 1092 aa23.28■■□□□ 1.32
LMNA-211ENST00000470199 TSR2Q969E8 191 aaKnown RBP23.28■■□□□ 1.32
LMNA-211ENST00000470199 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
LMNA-211ENST00000470199 IL6STP40189 918 aaPredicted RBP23.27■■□□□ 1.32
LMNA-211ENST00000470199 CALD1Q05682 793 aaKnown RBP23.27■■□□□ 1.32
LMNA-211ENST00000470199 FKBP8Q14318 412 aa23.27■■□□□ 1.32
LMNA-211ENST00000470199 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
LMNA-211ENST00000470199 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
LMNA-211ENST00000470199 ARXQ96QS3 562 aa23.27■■□□□ 1.32
LMNA-211ENST00000470199 TBC1D2BQ9UPU7 963 aa23.27■■□□□ 1.32
LMNA-211ENST00000470199 POLD1P28340 1107 aa23.26■■□□□ 1.31
LMNA-211ENST00000470199 BCL2L12Q9HB09 334 aa23.26■■□□□ 1.31
LMNA-211ENST00000470199 LAMB4A4D0S4 1761 aa23.26■■□□□ 1.31
LMNA-211ENST00000470199 SPINK5Q9NQ38 1064 aaPredicted RBP23.25■■□□□ 1.31
LMNA-211ENST00000470199 NARFQ9UHQ1 456 aa23.25■■□□□ 1.31
LMNA-211ENST00000470199 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
LMNA-211ENST00000470199 ZPR1O75312 459 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 ANXA1P04083 346 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 MMP10P09238 476 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 MYL6BP14649 208 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 NGEFQ8N5V2 710 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
LMNA-211ENST00000470199 FHDC1Q9C0D6 1143 aaPredicted RBP23.23■■□□□ 1.31
LMNA-211ENST00000470199 PDIA6Q15084 440 aa23.22■■□□□ 1.31
LMNA-211ENST00000470199 PROSER3Q2NL68 480 aa23.22■■□□□ 1.31
LMNA-211ENST00000470199 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
LMNA-211ENST00000470199 NLGN1Q8N2Q7 840 aa23.22■■□□□ 1.31
LMNA-211ENST00000470199 IL16Q14005 1332 aa23.21■■□□□ 1.31
LMNA-211ENST00000470199 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
LMNA-211ENST00000470199 A0A087WZG4 1122 aa23.2■■□□□ 1.3
LMNA-211ENST00000470199 CAMTA2O94983 1202 aa23.2■■□□□ 1.3
LMNA-211ENST00000470199 DDR1Q08345 913 aa23.2■■□□□ 1.3
LMNA-211ENST00000470199 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
LMNA-211ENST00000470199 KLHL34Q8N239 644 aa23.2■■□□□ 1.3
LMNA-211ENST00000470199 TSPYL6Q8N831 410 aa23.2■■□□□ 1.3
LMNA-211ENST00000470199 LRP10Q7Z4F1 713 aa23.19■■□□□ 1.3
LMNA-211ENST00000470199 TM4SF1P30408 202 aa23.18■■□□□ 1.3
LMNA-211ENST00000470199 TTLL7Q6ZT98 887 aa23.18■■□□□ 1.3
LMNA-211ENST00000470199 FANCIQ9NVI1 1328 aa23.17■■□□□ 1.3
LMNA-211ENST00000470199 NFIXQ14938 502 aa23.17■■□□□ 1.3
LMNA-211ENST00000470199 HDGFL1Q5TGJ6 251 aa23.17■■□□□ 1.3
LMNA-211ENST00000470199 SYT17Q9BSW7 474 aa23.17■■□□□ 1.3
LMNA-211ENST00000470199 TBC1D9BQ66K14 1250 aa23.16■■□□□ 1.3
LMNA-211ENST00000470199 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
LMNA-211ENST00000470199 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
LMNA-211ENST00000470199 CHPF2Q9P2E5 772 aa23.16■■□□□ 1.3
LMNA-211ENST00000470199 ERBB4Q15303 1308 aa23.15■■□□□ 1.3
LMNA-211ENST00000470199 HOXB7P09629 217 aa23.15■■□□□ 1.3
LMNA-211ENST00000470199 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
LMNA-211ENST00000470199 SCN7AQ01118 1682 aa23.15■■□□□ 1.3
LMNA-211ENST00000470199 POLRMTO00411 1230 aaKnown RBP23.14■■□□□ 1.29
LMNA-211ENST00000470199 HLFQ16534 295 aa23.14■■□□□ 1.29
LMNA-211ENST00000470199 DDX21Q9NR30 783 aaKnown RBP eCLIP23.13■■□□□ 1.29
LMNA-211ENST00000470199 PARP3Q9Y6F1 533 aa23.13■■□□□ 1.29
LMNA-211ENST00000470199 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
LMNA-211ENST00000470199 EXOSC9Q06265 439 aaKnown RBP23.12■■□□□ 1.29
LMNA-211ENST00000470199 BCORQ6W2J9 1755 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms