RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 RFC4P35249 363 aa12.81□□□□□ -0.36
SRRT-208ENST00000469602 PNISRQ8TF01 805 aaKnown RBP12.81□□□□□ -0.36
SRRT-208ENST00000469602 FHDC1Q9C0D6 1143 aaPredicted RBP12.81□□□□□ -0.36
SRRT-208ENST00000469602 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
SRRT-208ENST00000469602 UTRNP46939 3433 aa12.81□□□□□ -0.36
SRRT-208ENST00000469602 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SRRT-208ENST00000469602 SOS1Q07889 1333 aaPredicted RBP12.8□□□□□ -0.36
SRRT-208ENST00000469602 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
SRRT-208ENST00000469602 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
SRRT-208ENST00000469602 MRS2Q9HD23 443 aa12.79□□□□□ -0.36
SRRT-208ENST00000469602 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
SRRT-208ENST00000469602 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
SRRT-208ENST00000469602 GYS1P13807 737 aa12.78□□□□□ -0.36
SRRT-208ENST00000469602 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
SRRT-208ENST00000469602 SYT17Q9BSW7 474 aa12.78□□□□□ -0.36
SRRT-208ENST00000469602 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
SRRT-208ENST00000469602 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
SRRT-208ENST00000469602 COL15A1P39059 1388 aa12.78□□□□□ -0.36
SRRT-208ENST00000469602 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
SRRT-208ENST00000469602 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
SRRT-208ENST00000469602 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
SRRT-208ENST00000469602 USP16Q9Y5T5 823 aa12.77□□□□□ -0.37
SRRT-208ENST00000469602 APAF1O14727 1248 aa12.76□□□□□ -0.37
SRRT-208ENST00000469602 MMP10P09238 476 aa12.76□□□□□ -0.37
SRRT-208ENST00000469602 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
SRRT-208ENST00000469602 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
SRRT-208ENST00000469602 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SRRT-208ENST00000469602 TSPYL4Q9UJ04 414 aa12.76□□□□□ -0.37
SRRT-208ENST00000469602 ZPR1O75312 459 aa12.75□□□□□ -0.37
SRRT-208ENST00000469602 A1BGP04217 495 aa12.75□□□□□ -0.37
SRRT-208ENST00000469602 IL6STP40189 918 aaPredicted RBP12.75□□□□□ -0.37
SRRT-208ENST00000469602 EIF4A1P60842 406 aaKnown RBP12.75□□□□□ -0.37
SRRT-208ENST00000469602 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
SRRT-208ENST00000469602 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
SRRT-208ENST00000469602 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
SRRT-208ENST00000469602 A0A087WZG4 1122 aa12.74□□□□□ -0.37
SRRT-208ENST00000469602 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
SRRT-208ENST00000469602 FKBP8Q14318 412 aa12.74□□□□□ -0.37
SRRT-208ENST00000469602 USPL1Q5W0Q7 1092 aa12.74□□□□□ -0.37
SRRT-208ENST00000469602 CD2APQ9Y5K6 639 aa12.74□□□□□ -0.37
SRRT-208ENST00000469602 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
SRRT-208ENST00000469602 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
SRRT-208ENST00000469602 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
SRRT-208ENST00000469602 CHL1O00533 1208 aa12.72□□□□□ -0.37
SRRT-208ENST00000469602 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
SRRT-208ENST00000469602 NLGN2Q8NFZ4 835 aa12.72□□□□□ -0.37
SRRT-208ENST00000469602 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
SRRT-208ENST00000469602 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
SRRT-208ENST00000469602 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
SRRT-208ENST00000469602 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
SRRT-208ENST00000469602 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
SRRT-208ENST00000469602 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
SRRT-208ENST00000469602 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
SRRT-208ENST00000469602 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
SRRT-208ENST00000469602 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
SRRT-208ENST00000469602 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
SRRT-208ENST00000469602 TM4SF1P30408 202 aa12.7□□□□□ -0.38
SRRT-208ENST00000469602 DDR1Q08345 913 aa12.7□□□□□ -0.38
SRRT-208ENST00000469602 TBC1D2BQ9UPU7 963 aa12.7□□□□□ -0.38
SRRT-208ENST00000469602 NRXN2Q9P2S2 1712 aa12.7□□□□□ -0.38
SRRT-208ENST00000469602 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
SRRT-208ENST00000469602 KIAA1551Q9HCM1 1747 aa12.69□□□□□ -0.38
SRRT-208ENST00000469602 POLRMTO00411 1230 aaKnown RBP12.69□□□□□ -0.38
SRRT-208ENST00000469602 CAMTA2O94983 1202 aa12.69□□□□□ -0.38
SRRT-208ENST00000469602 NFIXQ14938 502 aa12.69□□□□□ -0.38
SRRT-208ENST00000469602 CCDC27Q2M243 656 aa12.69□□□□□ -0.38
SRRT-208ENST00000469602 DZIP3Q86Y13 1208 aaKnown RBP12.69□□□□□ -0.38
SRRT-208ENST00000469602 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
SRRT-208ENST00000469602 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
SRRT-208ENST00000469602 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
SRRT-208ENST00000469602 ZNF853P0CG23 659 aa12.68□□□□□ -0.38
SRRT-208ENST00000469602 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
SRRT-208ENST00000469602 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
SRRT-208ENST00000469602 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
SRRT-208ENST00000469602 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
SRRT-208ENST00000469602 GNAI1P63096 354 aa12.67□□□□□ -0.38
SRRT-208ENST00000469602 NUP98P52948 1817 aa12.67□□□□□ -0.38
SRRT-208ENST00000469602 CHD4Q14839 1912 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 BRCA1P38398 1863 aaKnown RBP12.66□□□□□ -0.38
SRRT-208ENST00000469602 RGL2O15211 777 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 MYL6BP14649 208 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 EIF2S2P20042 333 aaKnown RBP12.66□□□□□ -0.38
SRRT-208ENST00000469602 TGFB2P61812 414 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 GPR162Q16538 588 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 TBC1D9BQ66K14 1250 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 BICDL1Q6ZP65 573 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
SRRT-208ENST00000469602 HOXB7P09629 217 aa12.65□□□□□ -0.38
SRRT-208ENST00000469602 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
SRRT-208ENST00000469602 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
SRRT-208ENST00000469602 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
SRRT-208ENST00000469602 SERPINB2P05120 415 aa12.64□□□□□ -0.39
SRRT-208ENST00000469602 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
SRRT-208ENST00000469602 PDIA6Q15084 440 aa12.64□□□□□ -0.39
SRRT-208ENST00000469602 SETDB2Q96T68 719 aa12.64□□□□□ -0.39
SRRT-208ENST00000469602 IL16Q14005 1332 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms