RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 GIGYF1O75420 1035 aaPredicted RBP14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 NEFMP07197 916 aa14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 BICDL1Q6ZP65 573 aa14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 NPM2Q86SE8 214 aaKnown RBP14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
TGFBR3-205ENST00000468996 MRC1P22897 1456 aa14.15□□□□□ -0.14
TGFBR3-205ENST00000468996 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
TGFBR3-205ENST00000468996 NFIXQ14938 502 aa14.15□□□□□ -0.14
TGFBR3-205ENST00000468996 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
TGFBR3-205ENST00000468996 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 COL15A1P39059 1388 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 HEG1Q9ULI3 1381 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 A0A087WZG4 1122 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 A1BGP04217 495 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 CHRNA5P30532 468 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 PIM2Q9P1W9 311 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 TBC1D2BQ9UPU7 963 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 TJP1Q07157 1748 aa14.14□□□□□ -0.15
TGFBR3-205ENST00000468996 SERPINB2P05120 415 aa14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 KCNA3P22001 575 aa14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 DALRD3Q5D0E6 543 aaKnown RBP14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 BCL2L12Q9HB09 334 aa14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 GPBP1L1Q9HC44 474 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 MIS18AQ9NYP9 233 aa14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 C10orf71Q711Q0 1435 aa14.13□□□□□ -0.15
TGFBR3-205ENST00000468996 CEMIPQ8WUJ3 1361 aa14.12□□□□□ -0.15
TGFBR3-205ENST00000468996 HTATSF1O43719 755 aaKnown RBP14.12□□□□□ -0.15
TGFBR3-205ENST00000468996 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
TGFBR3-205ENST00000468996 ATP10DQ9P241 1426 aa14.12□□□□□ -0.15
TGFBR3-205ENST00000468996 PRAMEF22A3QJZ6 481 aa14.11□□□□□ -0.15
TGFBR3-205ENST00000468996 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
TGFBR3-205ENST00000468996 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-205ENST00000468996 PIP4K2AP48426 406 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-205ENST00000468996 TAF7Q15545 349 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-205ENST00000468996 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
TGFBR3-205ENST00000468996 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-205ENST00000468996 TBC1D9BQ66K14 1250 aa14.1□□□□□ -0.15
TGFBR3-205ENST00000468996 ADAMTS7Q9UKP4 1686 aa14.1□□□□□ -0.15
TGFBR3-205ENST00000468996 RALBP1Q15311 655 aa14.09□□□□□ -0.15
TGFBR3-205ENST00000468996 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
TGFBR3-205ENST00000468996 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-205ENST00000468996 VIRMAQ69YN4 1812 aaKnown RBP14.08□□□□□ -0.15
TGFBR3-205ENST00000468996 NPHP1O15259 732 aa14.08□□□□□ -0.16
TGFBR3-205ENST00000468996 DZIP3Q86Y13 1208 aaKnown RBP14.08□□□□□ -0.16
TGFBR3-205ENST00000468996 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
TGFBR3-205ENST00000468996 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
TGFBR3-205ENST00000468996 MAPK8IP3Q9UPT6 1336 aa14.08□□□□□ -0.16
TGFBR3-205ENST00000468996 H0YIN7 160 aa14.07□□□□□ -0.16
TGFBR3-205ENST00000468996 NFE2L2Q16236 605 aa14.07□□□□□ -0.16
TGFBR3-205ENST00000468996 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
TGFBR3-205ENST00000468996 SETDB2Q96T68 719 aa14.07□□□□□ -0.16
TGFBR3-205ENST00000468996 THUMPD2Q9BTF0 503 aaKnown RBP14.07□□□□□ -0.16
TGFBR3-205ENST00000468996 C9orf131Q5VYM1 1079 aa14.06□□□□□ -0.16
TGFBR3-205ENST00000468996 CAMTA2O94983 1202 aa14.05□□□□□ -0.16
TGFBR3-205ENST00000468996 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
TGFBR3-205ENST00000468996 TTLL6Q8N841 843 aa14.05□□□□□ -0.16
TGFBR3-205ENST00000468996 PNISRQ8TF01 805 aaKnown RBP14.05□□□□□ -0.16
TGFBR3-205ENST00000468996 ZNF622Q969S3 477 aaKnown RBP eCLIP14.05□□□□□ -0.16
TGFBR3-205ENST00000468996 UBR2Q8IWV8 1755 aa14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 NBPF26B4DH59 902 aa14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 NBPF10Q6P3W6 841 aaKnown RBP14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 NBPF15Q8N660 670 aa14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 ADCY9O60503 1353 aa14.04□□□□□ -0.16
TGFBR3-205ENST00000468996 PDE6BP35913 854 aa14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 RIPK4P57078 832 aa14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 PRR5LQ6MZQ0 368 aa14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 BRIP1Q9BX63 1249 aa14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
TGFBR3-205ENST00000468996 SIPA1L3O60292 1781 aaPredicted RBP14.02□□□□□ -0.16
TGFBR3-205ENST00000468996 KIAA1551Q9HCM1 1747 aa14.02□□□□□ -0.16
TGFBR3-205ENST00000468996 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
TGFBR3-205ENST00000468996 CNBD1Q8NA66 436 aa14.02□□□□□ -0.17
TGFBR3-205ENST00000468996 ZNF652Q9Y2D9 606 aa14.02□□□□□ -0.17
TGFBR3-205ENST00000468996 RRP7AQ9Y3A4 280 aaKnown RBP14.02□□□□□ -0.17
TGFBR3-205ENST00000468996 CARMIL3Q8ND23 1372 aa14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 FAM177BA6PVY3 158 aa14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 ST5P78524 1137 aa14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 CLEC4GQ6UXB4 293 aa14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
TGFBR3-205ENST00000468996 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
TGFBR3-205ENST00000468996 MYL6BP14649 208 aa14□□□□□ -0.17
TGFBR3-205ENST00000468996 RASSF7Q02833 373 aa14□□□□□ -0.17
TGFBR3-205ENST00000468996 NMRK2Q9NPI5 230 aa14□□□□□ -0.17
TGFBR3-205ENST00000468996 NIP7Q9Y221 180 aaKnown RBP eCLIP14□□□□□ -0.17
TGFBR3-205ENST00000468996 KIF3CO14782 793 aa13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 C21orf2O43822 256 aa13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 WDR43Q15061 677 aaKnown RBP eCLIP13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 HLFQ16534 295 aa13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
TGFBR3-205ENST00000468996 TSPYL4Q9UJ04 414 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms