RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 CENPQQ7L2Z9 268 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 GPR161Q8N6U8 529 aaKnown RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 PCMTD1Q96MG8 357 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 CNTNAP3BQ96NU0 1288 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 CNTNAP3Q9BZ76 1288 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 GZF1Q9H116 711 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 CYLDQ9NQC7 956 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 NAP1L2Q9ULW6 460 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 ZC3H4Q9UPT8 1303 aaKnown RBP6.13□□□□□ -1.43
SF3B1-207ENST00000468925 SCRIBQ14160 1630 aa6.13□□□□□ -1.43
SF3B1-207ENST00000468925 ERVH48-1M5A8F1 160 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 ROCK2O75116 1388 aaKnown RBP6.12□□□□□ -1.43
SF3B1-207ENST00000468925 FRAT2O75474 233 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-207ENST00000468925 OFD1O75665 1012 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 ITGB2P05107 769 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 BRD2P25440 801 aaKnown RBP6.12□□□□□ -1.43
SF3B1-207ENST00000468925 SLC20A2Q08357 652 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 NBPF20Q3BBV1 942 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 Q6ZVU0 165 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 UACAQ9BZF9 1416 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 CDV3Q9UKY7 258 aaKnown RBP6.12□□□□□ -1.43
SF3B1-207ENST00000468925 PCDHB9Q9Y5E1 797 aa6.12□□□□□ -1.43
SF3B1-207ENST00000468925 NCOA1Q15788 1441 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 ADD1P35611 737 aaKnown RBP6.11□□□□□ -1.43
SF3B1-207ENST00000468925 FAM193AP78312 1265 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 CCDC173Q0VFZ6 552 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 FTSJ3Q8IY81 847 aaKnown RBP6.11□□□□□ -1.43
SF3B1-207ENST00000468925 CCDC155Q8N6L0 562 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 RETREG2Q8NC44 543 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 PNMA1Q8ND90 353 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 TRIM34Q9BYJ4 488 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 TSPYL1Q9H0U9 437 aa6.11□□□□□ -1.43
SF3B1-207ENST00000468925 BCCIPQ9P287 314 aaKnown RBP eCLIP6.11□□□□□ -1.43
SF3B1-207ENST00000468925 PLEKHH2Q8IVE3 1493 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 ARAP1Q96P48 1450 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 E9PSI1 815 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 MSTNO14793 375 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 ARHGEF15O94989 841 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 XRCC6P12956 609 aaKnown RBP eCLIP6.1□□□□□ -1.43
SF3B1-207ENST00000468925 MSNP26038 577 aaKnown RBP6.1□□□□□ -1.43
SF3B1-207ENST00000468925 ZSCAN30Q86W11 494 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 FAM9BQ8IZU0 186 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-207ENST00000468925 SPOCK3Q9BQ16 436 aa6.1□□□□□ -1.43
SF3B1-207ENST00000468925 UPF2Q9HAU5 1272 aaKnown RBP6.1□□□□□ -1.43
SF3B1-207ENST00000468925 EIF3AQ14152 1382 aaKnown RBP6.09□□□□□ -1.43
SF3B1-207ENST00000468925 CCDC7Q96M83 1385 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 BTBD11A6QL63 1104 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 ADH1AP07327 375 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 RHOQP17081 205 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 RGS3P49796 1198 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 PLA2G4EQ3MJ16 856 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 KIAA1211Q6ZU35 1233 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 TEX2Q8IWB9 1127 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 VWA5B2Q8N398 1253 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 CCDC94Q9BW85 323 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-207ENST00000468925 COL25A1Q9BXS0 654 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-207ENST00000468925 RCAN3Q9UKA8 241 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 GPSM3Q9Y4H4 160 aa6.09□□□□□ -1.43
SF3B1-207ENST00000468925 AKNAQ7Z591 1439 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 IBTKQ9P2D0 1353 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-207ENST00000468925 LILRA1O75019 489 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 PROCP04070 461 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 FBXO45P0C2W1 286 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 IRF5Q13568 498 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 RNFT1Q5M7Z0 435 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 CREBRFQ8IUR6 639 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 RNF217Q8TC41 542 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 CCDC97Q96F63 343 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-207ENST00000468925 PRXQ9BXM0 1461 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 RAPGEF2Q9Y4G8 1499 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 MIA2Q96PC5 1412 aa6.08□□□□□ -1.44
SF3B1-207ENST00000468925 BRD4O60885 1362 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-207ENST00000468925 NINLQ9Y2I6 1382 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 MAPK8IP3Q9UPT6 1336 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 TIAM1Q13009 1591 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 GIGYF1O75420 1035 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-207ENST00000468925 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-207ENST00000468925 HMGN5P82970 282 aaKnown RBP6.07□□□□□ -1.44
SF3B1-207ENST00000468925 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-207ENST00000468925 PRICKLE2Q7Z3G6 844 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 PPP1R9BQ96SB3 815 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 GRPEL1Q9HAV7 217 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 SERPINA10Q9UK55 444 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 RUSC2Q8N2Y8 1516 aa6.07□□□□□ -1.44
SF3B1-207ENST00000468925 VIRMAQ69YN4 1812 aaKnown RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 SLC35F4A4IF30 521 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 ZBBXA8MT70 800 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 MEN1O00255 615 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 ZNF500O60304 480 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 ITGA6P23229 1130 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 MCM4P33991 863 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 PTGIRP43119 386 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 RALBP1Q15311 655 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 SVOPQ8N4V2 548 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 KDF1Q8NAX2 398 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 DNAJC2Q99543 621 aaKnown RBP6.06□□□□□ -1.44
SF3B1-207ENST00000468925 CHMP5Q9NZZ3 219 aa6.06□□□□□ -1.44
SF3B1-207ENST00000468925 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms