RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 PDE3AQ14432 1141 aa21.27■■□□□ 1
RNF6-204ENST00000468480 SMARCC1Q92922 1105 aaPredicted RBP21.27■■□□□ 1
RNF6-204ENST00000468480 SBF1O95248 1867 aa21.26■□□□□ 0.99
RNF6-204ENST00000468480 HMGB2P26583 209 aaKnown RBP21.26■□□□□ 0.99
RNF6-204ENST00000468480 GNAI1P63096 354 aa21.26■□□□□ 0.99
RNF6-204ENST00000468480 COL13A1Q5TAT6 717 aaPredicted RBP21.26■□□□□ 0.99
RNF6-204ENST00000468480 EXOC6Q8TAG9 804 aa21.26■□□□□ 0.99
RNF6-204ENST00000468480 LOC102724428A0A0B4J2F2 783 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 MMP10P09238 476 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 COL5A3P25940 1745 aaPredicted RBP21.25■□□□□ 0.99
RNF6-204ENST00000468480 SIK1P57059 783 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 ITPK1Q13572 414 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 FANCIQ9NVI1 1328 aa21.25■□□□□ 0.99
RNF6-204ENST00000468480 C10orf71Q711Q0 1435 aa21.24■□□□□ 0.99
RNF6-204ENST00000468480 SULT6B1Q6IMI4 303 aa21.24■□□□□ 0.99
RNF6-204ENST00000468480 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
RNF6-204ENST00000468480 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
RNF6-204ENST00000468480 NCAPD2Q15021 1401 aa21.23■□□□□ 0.99
RNF6-204ENST00000468480 A0A0G2JLW4 131 aa21.23■□□□□ 0.99
RNF6-204ENST00000468480 GNPATO15228 680 aa21.23■□□□□ 0.99
RNF6-204ENST00000468480 RARSP54136 660 aaKnown RBP21.23■□□□□ 0.99
RNF6-204ENST00000468480 BCS1LQ9Y276 419 aa21.23■□□□□ 0.99
RNF6-204ENST00000468480 PLIN1O60240 522 aa21.22■□□□□ 0.99
RNF6-204ENST00000468480 NKX1-1Q15270 411 aaPredicted RBP21.22■□□□□ 0.99
RNF6-204ENST00000468480 ASAP1Q9ULH1 1129 aa21.22■□□□□ 0.99
RNF6-204ENST00000468480 CRBNQ96SW2 442 aa21.21■□□□□ 0.99
RNF6-204ENST00000468480 ZNF831Q5JPB2 1677 aa21.21■□□□□ 0.99
RNF6-204ENST00000468480 ARHGAP27Q6ZUM4 889 aa21.2■□□□□ 0.98
RNF6-204ENST00000468480 JMYQ8N9B5 988 aa21.2■□□□□ 0.98
RNF6-204ENST00000468480 KLRG1Q96E93 195 aa21.2■□□□□ 0.98
RNF6-204ENST00000468480 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
RNF6-204ENST00000468480 KDRP35968 1356 aa21.2■□□□□ 0.98
RNF6-204ENST00000468480 TNRC6CQ9HCJ0 1690 aaKnown RBP21.19■□□□□ 0.98
RNF6-204ENST00000468480 CAPN15O75808 1086 aa21.19■□□□□ 0.98
RNF6-204ENST00000468480 GAS2L2Q8NHY3 880 aa21.19■□□□□ 0.98
RNF6-204ENST00000468480 RBM46Q8TBY0 533 aaKnown RBP21.19■□□□□ 0.98
RNF6-204ENST00000468480 DPEP1P16444 411 aa21.18■□□□□ 0.98
RNF6-204ENST00000468480 TGFB2P61812 414 aa21.18■□□□□ 0.98
RNF6-204ENST00000468480 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
RNF6-204ENST00000468480 KCPQ6ZWJ8 1503 aa21.18■□□□□ 0.98
RNF6-204ENST00000468480 BCAR3O75815 825 aa21.17■□□□□ 0.98
RNF6-204ENST00000468480 KIF16BQ96L93 1317 aa21.17■□□□□ 0.98
RNF6-204ENST00000468480 IPO8O15397 1037 aaKnown RBP21.16■□□□□ 0.98
RNF6-204ENST00000468480 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
RNF6-204ENST00000468480 ATP6V1AP38606 617 aa21.16■□□□□ 0.98
RNF6-204ENST00000468480 EXOSC9Q06265 439 aaKnown RBP21.16■□□□□ 0.98
RNF6-204ENST00000468480 KCNA3P22001 575 aa21.15■□□□□ 0.98
RNF6-204ENST00000468480 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
RNF6-204ENST00000468480 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
RNF6-204ENST00000468480 CFAP44Q96MT7 982 aa21.15■□□□□ 0.98
RNF6-204ENST00000468480 ATG3Q9NT62 314 aa21.15■□□□□ 0.98
RNF6-204ENST00000468480 TMOD3Q9NYL9 352 aa21.15■□□□□ 0.98
RNF6-204ENST00000468480 ZKSCAN2Q63HK3 967 aa21.14■□□□□ 0.97
RNF6-204ENST00000468480 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.97
RNF6-204ENST00000468480 SLC4A9Q96Q91 983 aa21.14■□□□□ 0.97
RNF6-204ENST00000468480 CCDC88AQ3V6T2 1871 aa21.13■□□□□ 0.97
RNF6-204ENST00000468480 EYA1Q99502 592 aa21.13■□□□□ 0.97
RNF6-204ENST00000468480 SMC4Q9NTJ3 1288 aa21.13■□□□□ 0.97
RNF6-204ENST00000468480 ZNF853P0CG23 659 aa21.12■□□□□ 0.97
RNF6-204ENST00000468480 AEBP1Q8IUX7 1158 aa21.12■□□□□ 0.97
RNF6-204ENST00000468480 FRAT1Q92837 279 aaPredicted RBP21.12■□□□□ 0.97
RNF6-204ENST00000468480 PLEKHG2Q9H7P9 1386 aa21.11■□□□□ 0.97
RNF6-204ENST00000468480 GYS1P13807 737 aa21.11■□□□□ 0.97
RNF6-204ENST00000468480 FSTL1Q12841 308 aa21.11■□□□□ 0.97
RNF6-204ENST00000468480 CENPQQ7L2Z9 268 aaPredicted RBP21.11■□□□□ 0.97
RNF6-204ENST00000468480 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
RNF6-204ENST00000468480 ARHGEF1Q92888 912 aaKnown RBP21.11■□□□□ 0.97
RNF6-204ENST00000468480 SPG7Q9UQ90 795 aa21.11■□□□□ 0.97
RNF6-204ENST00000468480 LAS1LQ9Y4W2 734 aaKnown RBP21.11■□□□□ 0.97
RNF6-204ENST00000468480 BRPF1P55201 1214 aaPredicted RBP21.1■□□□□ 0.97
RNF6-204ENST00000468480 TRAPPC3LQ5T215 181 aa21.1■□□□□ 0.97
RNF6-204ENST00000468480 C20orf194Q5TEA3 1177 aa21.1■□□□□ 0.97
RNF6-204ENST00000468480 TNS4Q8IZW8 715 aa21.1■□□□□ 0.97
RNF6-204ENST00000468480 CHMP4BQ9H444 224 aaKnown RBP21.1■□□□□ 0.97
RNF6-204ENST00000468480 TSHZ2Q9NRE2 1034 aa21.1■□□□□ 0.97
RNF6-204ENST00000468480 PHKG2P15735 406 aa21.09■□□□□ 0.97
RNF6-204ENST00000468480 PRELPP51888 382 aa21.09■□□□□ 0.97
RNF6-204ENST00000468480 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
RNF6-204ENST00000468480 C16orf71Q8IYS4 520 aaPredicted RBP21.09■□□□□ 0.97
RNF6-204ENST00000468480 CCDC87Q9NVE4 849 aa21.09■□□□□ 0.97
RNF6-204ENST00000468480 RTCBQ9Y3I0 505 aaKnown RBP21.09■□□□□ 0.97
RNF6-204ENST00000468480 ADAMTS7Q9UKP4 1686 aa21.08■□□□□ 0.96
RNF6-204ENST00000468480 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
RNF6-204ENST00000468480 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
RNF6-204ENST00000468480 RRAGCQ9HB90 399 aa21.07■□□□□ 0.96
RNF6-204ENST00000468480 TJP1Q07157 1748 aa21.07■□□□□ 0.96
RNF6-204ENST00000468480 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
RNF6-204ENST00000468480 IFNL2Q8IZJ0 200 aa21.06■□□□□ 0.96
RNF6-204ENST00000468480 BABAM1Q9NWV8 329 aa21.06■□□□□ 0.96
RNF6-204ENST00000468480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.06■□□□□ 0.96
RNF6-204ENST00000468480 TIAM2Q8IVF5 1701 aa21.05■□□□□ 0.96
RNF6-204ENST00000468480 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
RNF6-204ENST00000468480 RNF181Q9P0P0 153 aa21.05■□□□□ 0.96
RNF6-204ENST00000468480 PARP3Q9Y6F1 533 aa21.05■□□□□ 0.96
RNF6-204ENST00000468480 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 CNTNAP4Q9C0A0 1308 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 DLG5Q8TDM6 1919 aa21.04■□□□□ 0.96
RNF6-204ENST00000468480 TCERG1O14776 1098 aaKnown RBP21.04■□□□□ 0.96
RNF6-204ENST00000468480 ADRA2BP18089 450 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms