RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 DALRD3Q5D0E6 543 aaKnown RBP25.56■■□□□ 1.68
COL1A2-204ENST00000467931 CHRNA5P30532 468 aa25.55■■□□□ 1.68
COL1A2-204ENST00000467931 TTC5Q8N0Z6 440 aa25.55■■□□□ 1.68
COL1A2-204ENST00000467931 ZBTB1Q9Y2K1 713 aa25.55■■□□□ 1.68
COL1A2-204ENST00000467931 SBF1O95248 1867 aa25.55■■□□□ 1.68
COL1A2-204ENST00000467931 COL3A1P02461 1466 aaPredicted RBP25.54■■□□□ 1.68
COL1A2-204ENST00000467931 C9orf131Q5VYM1 1079 aa25.54■■□□□ 1.68
COL1A2-204ENST00000467931 SIPA1L3O60292 1781 aaPredicted RBP25.54■■□□□ 1.68
COL1A2-204ENST00000467931 TM4SF1P30408 202 aa25.53■■□□□ 1.68
COL1A2-204ENST00000467931 DLEC1Q9Y238 1755 aa25.53■■□□□ 1.68
COL1A2-204ENST00000467931 NRXN2Q9P2S2 1712 aa25.52■■□□□ 1.68
COL1A2-204ENST00000467931 CANXP27824 592 aaKnown RBP25.52■■□□□ 1.68
COL1A2-204ENST00000467931 NARFQ9UHQ1 456 aa25.52■■□□□ 1.68
COL1A2-204ENST00000467931 TEFQ10587 303 aa25.51■■□□□ 1.67
COL1A2-204ENST00000467931 VSIG10Q8N0Z9 540 aa25.51■■□□□ 1.67
COL1A2-204ENST00000467931 NFIXQ14938 502 aa25.5■■□□□ 1.67
COL1A2-204ENST00000467931 NMRK2Q9NPI5 230 aa25.5■■□□□ 1.67
COL1A2-204ENST00000467931 NPC1L1Q9UHC9 1359 aa25.49■■□□□ 1.67
COL1A2-204ENST00000467931 GAS2L2Q8NHY3 880 aa25.49■■□□□ 1.67
COL1A2-204ENST00000467931 RNF181Q9P0P0 153 aa25.49■■□□□ 1.67
COL1A2-204ENST00000467931 CCDC88AQ3V6T2 1871 aa25.49■■□□□ 1.67
COL1A2-204ENST00000467931 GNAT3A8MTJ3 354 aa25.48■■□□□ 1.67
COL1A2-204ENST00000467931 TOMM70O94826 608 aa25.47■■□□□ 1.67
COL1A2-204ENST00000467931 STARD3NLO95772 234 aa25.47■■□□□ 1.67
COL1A2-204ENST00000467931 ZNF330Q9Y3S2 320 aaPredicted RBP25.47■■□□□ 1.67
COL1A2-204ENST00000467931 SCN7AQ01118 1682 aa25.47■■□□□ 1.67
COL1A2-204ENST00000467931 TNRC6CQ9HCJ0 1690 aaKnown RBP25.46■■□□□ 1.67
COL1A2-204ENST00000467931 C16orf71Q8IYS4 520 aaPredicted RBP25.46■■□□□ 1.67
COL1A2-204ENST00000467931 SERPINB2P05120 415 aa25.45■■□□□ 1.66
COL1A2-204ENST00000467931 BICDL1Q6ZP65 573 aa25.45■■□□□ 1.66
COL1A2-204ENST00000467931 BCL2L12Q9HB09 334 aa25.45■■□□□ 1.66
COL1A2-204ENST00000467931 CFAP53Q96M91 514 aa25.44■■□□□ 1.66
COL1A2-204ENST00000467931 HEG1Q9ULI3 1381 aa25.44■■□□□ 1.66
COL1A2-204ENST00000467931 KDM2BQ8NHM5 1336 aa25.43■■□□□ 1.66
COL1A2-204ENST00000467931 A0A087WZG4 1122 aa25.43■■□□□ 1.66
COL1A2-204ENST00000467931 ZNF790Q6PG37 636 aa25.43■■□□□ 1.66
COL1A2-204ENST00000467931 IL17REQ8NFR9 667 aa25.43■■□□□ 1.66
COL1A2-204ENST00000467931 ZNF496Q96IT1 587 aaPredicted RBP25.43■■□□□ 1.66
COL1A2-204ENST00000467931 APLP1P51693 650 aa25.42■■□□□ 1.66
COL1A2-204ENST00000467931 TIAM2Q8IVF5 1701 aa25.42■■□□□ 1.66
COL1A2-204ENST00000467931 WDR90Q96KV7 1748 aa25.42■■□□□ 1.66
COL1A2-204ENST00000467931 CACNA1SQ13698 1873 aa25.42■■□□□ 1.66
COL1A2-204ENST00000467931 ANKRD31Q8N7Z5 1873 aa25.42■■□□□ 1.66
COL1A2-204ENST00000467931 RASSF7Q02833 373 aa25.41■■□□□ 1.66
COL1A2-204ENST00000467931 NPM2Q86SE8 214 aaKnown RBP25.41■■□□□ 1.66
COL1A2-204ENST00000467931 C2CD5Q86YS7 1000 aa25.41■■□□□ 1.66
COL1A2-204ENST00000467931 PRKAR2BP31323 418 aa25.4■■□□□ 1.66
COL1A2-204ENST00000467931 EIF5P55010 431 aaKnown RBP25.4■■□□□ 1.66
COL1A2-204ENST00000467931 TEX13AQ9BXU3 409 aaPredicted RBP25.4■■□□□ 1.66
COL1A2-204ENST00000467931 CARMIL3Q8ND23 1372 aa25.4■■□□□ 1.66
COL1A2-204ENST00000467931 FMNL2Q96PY5 1086 aa25.39■■□□□ 1.66
COL1A2-204ENST00000467931 H0YIN7 160 aa25.38■■□□□ 1.65
COL1A2-204ENST00000467931 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
COL1A2-204ENST00000467931 BCORQ6W2J9 1755 aa25.38■■□□□ 1.65
COL1A2-204ENST00000467931 COL11A2P13942 1736 aaPredicted RBP25.37■■□□□ 1.65
COL1A2-204ENST00000467931 TBC1D9BQ66K14 1250 aa25.37■■□□□ 1.65
COL1A2-204ENST00000467931 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
COL1A2-204ENST00000467931 TBC1D2BQ9UPU7 963 aa25.37■■□□□ 1.65
COL1A2-204ENST00000467931 NUDCQ9Y266 331 aa25.37■■□□□ 1.65
COL1A2-204ENST00000467931 BTBD11A6QL63 1104 aa25.36■■□□□ 1.65
COL1A2-204ENST00000467931 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
COL1A2-204ENST00000467931 RRAGCQ9HB90 399 aa25.36■■□□□ 1.65
COL1A2-204ENST00000467931 CEMIPQ8WUJ3 1361 aa25.35■■□□□ 1.65
COL1A2-204ENST00000467931 NPHP1O15259 732 aa25.35■■□□□ 1.65
COL1A2-204ENST00000467931 RSPH6AQ9H0K4 717 aa25.35■■□□□ 1.65
COL1A2-204ENST00000467931 A1BGP04217 495 aa25.34■■□□□ 1.65
COL1A2-204ENST00000467931 IL6STP40189 918 aaPredicted RBP25.34■■□□□ 1.65
COL1A2-204ENST00000467931 U2AF1L5P0DN76 240 aaPredicted RBP25.33■■□□□ 1.65
COL1A2-204ENST00000467931 LMNB1P20700 586 aa25.33■■□□□ 1.65
COL1A2-204ENST00000467931 U2AF1Q01081 240 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL1A2-204ENST00000467931 IFFO2Q5TF58 517 aa25.33■■□□□ 1.65
COL1A2-204ENST00000467931 CCDC24Q8N4L8 307 aa25.33■■□□□ 1.65
COL1A2-204ENST00000467931 ZNF622Q969S3 477 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL1A2-204ENST00000467931 KCNQ3O43525 872 aa25.32■■□□□ 1.64
COL1A2-204ENST00000467931 RTF1Q92541 710 aaKnown RBP25.32■■□□□ 1.64
COL1A2-204ENST00000467931 DICER1Q9UPY3 1922 aaKnown RBP25.31■■□□□ 1.64
COL1A2-204ENST00000467931 ZNF219Q9P2Y4 722 aaPredicted RBP25.31■■□□□ 1.64
COL1A2-204ENST00000467931 ZC3H4Q9UPT8 1303 aaKnown RBP25.31■■□□□ 1.64
COL1A2-204ENST00000467931 FER1L6Q2WGJ9 1857 aa25.3■■□□□ 1.64
COL1A2-204ENST00000467931 PDE6BP35913 854 aa25.3■■□□□ 1.64
COL1A2-204ENST00000467931 FSTL1Q12841 308 aa25.3■■□□□ 1.64
COL1A2-204ENST00000467931 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
COL1A2-204ENST00000467931 PRR5LQ6MZQ0 368 aa25.29■■□□□ 1.64
COL1A2-204ENST00000467931 SETDB2Q96T68 719 aa25.29■■□□□ 1.64
COL1A2-204ENST00000467931 DLG5Q8TDM6 1919 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 PIP4K2AP48426 406 aaPredicted RBP25.28■■□□□ 1.64
COL1A2-204ENST00000467931 MCM10Q7L590 875 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 DZIP3Q86Y13 1208 aaKnown RBP25.28■■□□□ 1.64
COL1A2-204ENST00000467931 CNBD1Q8NA66 436 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 BRIP1Q9BX63 1249 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 PDZRN3Q9UPQ7 1066 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 ARFGEF2Q9Y6D5 1785 aa25.28■■□□□ 1.64
COL1A2-204ENST00000467931 CAMTA2O94983 1202 aa25.27■■□□□ 1.64
COL1A2-204ENST00000467931 ST5P78524 1137 aa25.27■■□□□ 1.64
COL1A2-204ENST00000467931 NFKBIEO00221 500 aa25.26■■□□□ 1.63
COL1A2-204ENST00000467931 PRELPP51888 382 aa25.26■■□□□ 1.63
COL1A2-204ENST00000467931 HTRA3P83110 453 aa25.26■■□□□ 1.63
COL1A2-204ENST00000467931 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
COL1A2-204ENST00000467931 SLX4Q8IY92 1834 aa25.26■■□□□ 1.63
COL1A2-204ENST00000467931 GLTPD2A6NH11 291 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms