RNA–Protein interactions for RNA: ENST00000467857.1

NOP56-208, Transcript of NOP56 ribonucleoprotein, human

TSL 2

Gene NOP56, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP56-208	ENST00000467857	XPC	Q01831	940 aa	Predicted RBP	11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	MPRIP	Q6WCQ1	1025 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	DCAF5	Q96JK2	942 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	NLRP2	Q9NX02	1062 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	SPATA31A3	Q5VYP0	1347 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	HEG1	Q9ULI3	1381 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	ALS2	Q96Q42	1657 aa		11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	FAM208A	Q9UK61	1670 aa	Known RBP	11.27	□□□□□ -0.61
NOP56-208	ENST00000467857	GIGYF1	O75420	1035 aa	Predicted RBP	11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	ZC3H6	P61129	1189 aa	Known RBP	11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	RABEP1	Q15276	862 aa		11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	KSR2	Q6VAB6	950 aa		11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	SSH3	Q8TE77	659 aa		11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	USP44	Q9H0E7	712 aa		11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	STAP2	Q9UGK3	403 aa		11.26	□□□□□ -0.61
NOP56-208	ENST00000467857	ERC2	O15083	957 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	MCC	P23508	829 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	PDE1A	P54750	535 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	ERC1	Q8IUD2	1116 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	NECTIN2	Q92692	538 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	KIF1BP	Q96EK5	621 aa		11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	LRRFIP2	Q9Y608	721 aa	Known RBP	11.25	□□□□□ -0.61
NOP56-208	ENST00000467857	KDM3B	Q7LBC6	1761 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	PI4KAP2	A4QPH2	592 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	GSPT1	P15170	499 aa	Known RBP	11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	NEXN	Q0ZGT2	675 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	BEND3	Q5T5X7	828 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	LARP1	Q6PKG0	1096 aa	Known RBP	11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	TTC5	Q8N0Z6	440 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	PI4KAP1	Q8N8J0	262 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	ANTXR1	Q9H6X2	564 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	SLC52A2	Q9HAB3	445 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	CHPF2	Q9P2E5	772 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	AXIN2	Q9Y2T1	843 aa		11.24	□□□□□ -0.61
NOP56-208	ENST00000467857	ST18	O60284	1047 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	HSP90AA1	P07900	732 aa	Known RBP	11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	PHKG2	P15735	406 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	SDS	P20132	328 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	MX1	P20591	662 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	MCM2	P49736	904 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	FXR2	P51116	673 aa	Known RBP eCLIP	11.23	□□□□□ -0.61	1e-12	■■■□□ 14.7
NOP56-208	ENST00000467857	MTX1	Q13505	466 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	ZNF790	Q6PG37	636 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	LINS1	Q8NG48	757 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	GPATCH3	Q96I76	525 aa		11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	PHAX	Q9H814	394 aa	Known RBP	11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.23	□□□□□ -0.61
NOP56-208	ENST00000467857	SNRPA1	P09661	255 aa	Known RBP	11.22	□□□□□ -0.61
NOP56-208	ENST00000467857	GSE1	Q14687	1217 aa		11.22	□□□□□ -0.61
NOP56-208	ENST00000467857	ERBB4	Q15303	1308 aa		11.22	□□□□□ -0.61
NOP56-208	ENST00000467857	USP26	Q9BXU7	913 aa		11.22	□□□□□ -0.61
NOP56-208	ENST00000467857	ADAMTS7	Q9UKP4	1686 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	PXDN	Q92626	1479 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857		K7ELQ4	463 aa	Predicted RBP	11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	SRGAP3	O43295	1099 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	SURF6	O75683	361 aa	Known RBP	11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	ANAPC15	P60006	121 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	FMNL2	Q96PY5	1086 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	SLK	Q9H2G2	1235 aa	Predicted RBP	11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	SLAIN2	Q9P270	581 aa		11.21	□□□□□ -0.61
NOP56-208	ENST00000467857	UTY	O14607	1347 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	SOS2	Q07890	1332 aa	Predicted RBP	11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	TTC41P	Q6P2S7	1318 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	DDX11L8	A8MPP1	907 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	ERVV-2	B6SEH9	535 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	APBB1	O00213	710 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	PLEKHG5	O94827	1062 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	PPP1R42	Q7Z4L9	355 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	RIC3	Q7Z5B4	369 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	GBP4	Q96PP9	640 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	CWC22	Q9HCG8	908 aa	Known RBP	11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	EXOC6B	Q9Y2D4	811 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	MAP3K2	Q9Y2U5	619 aa		11.2	□□□□□ -0.62
NOP56-208	ENST00000467857	SALL3	Q9BXA9	1300 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	PCDH11X	Q9BZA7	1347 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	PCDH11Y	Q9BZA8	1340 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	PNMA6E	A0A0J9YXQ4	647 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	SMARCA5	O60264	1052 aa	Predicted RBP	11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	CABP4	P57796	275 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	OS9	Q13438	667 aa	Predicted RBP	11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	BRINP3	Q76B58	766 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	CLASRP	Q8N2M8	674 aa	Known RBP	11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	PLCD3	Q8N3E9	789 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	RHPN1	Q8TCX5	695 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	RUFY2	Q8WXA3	655 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	PRDM11	Q9NQV5	511 aa		11.19	□□□□□ -0.62
NOP56-208	ENST00000467857	ADCY9	O60503	1353 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	WDR17	Q8IZU2	1322 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	TRIM6-TRIM34	B2RNG4	842 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	GRM8	O00222	908 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	KCNQ3	O43525	872 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	FRAT2	O75474	233 aa	Predicted RBP	11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	GLRX3	O76003	335 aa	Known RBP	11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	CNTROB	Q8N137	903 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	NFATC2IP	Q8NCF5	419 aa		11.18	□□□□□ -0.62
NOP56-208	ENST00000467857	USP42	Q9H9J4	1324 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms