RNA–Protein interactions for RNA: ENST00000467857.1

NOP56-208, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-208ENST00000467857 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.731e-323■■■■■ 51.8
NOP56-208ENST00000467857 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.21□□□□□ -0.944e-14■■■■■ 35.4
NOP56-208ENST00000467857 SMNDC1O75940 238 aaKnown RBP eCLIP9.02□□□□□ -0.972e-23■■■■■ 27.9
NOP56-208ENST00000467857 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.224e-21■■■■□ 25.8
NOP56-208ENST00000467857 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.85□□□□□ -1.313e-15■■■■□ 24.9
NOP56-208ENST00000467857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■■■□ 24.3
NOP56-208ENST00000467857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.34□□□□□ -0.753e-9■■■■□ 22.1
NOP56-208ENST00000467857 RBM5P52756 815 aaKnown RBP eCLIP10.31□□□□□ -0.766e-12■■■■□ 20.7
NOP56-208ENST00000467857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.296e-11■■■■□ 20
NOP56-208ENST00000467857 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.462e-8■■■■□ 19.9
NOP56-208ENST00000467857 SF3B4Q15427 424 aaKnown RBP eCLIP8.12□□□□□ -1.111e-11■■■□□ 18.7
NOP56-208ENST00000467857 NIP7Q9Y221 180 aaKnown RBP eCLIP10.79□□□□□ -0.681e-323■■■□□ 18.5
NOP56-208ENST00000467857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.93□□□□□ -0.822e-19■■■□□ 18.1
NOP56-208ENST00000467857 TIAL1Q01085 375 aaKnown RBP eCLIP9.08□□□□□ -0.968e-12■■■□□ 17.7
NOP56-208ENST00000467857 SF3A3Q12874 501 aaKnown RBP eCLIP9.31□□□□□ -0.926e-32■■■□□ 16.8
NOP56-208ENST00000467857 AATFQ9NY61 560 aaKnown RBP eCLIP10.53□□□□□ -0.723e-39■■■□□ 16.2
NOP56-208ENST00000467857 RBM15Q96T37 977 aaKnown RBP eCLIP9.6□□□□□ -0.875e-10■■■□□ 15.3
NOP56-208ENST00000467857 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.611e-12■■■□□ 14.7
NOP56-208ENST00000467857 TRA2AQ13595 282 aaKnown RBP eCLIP8.35□□□□□ -1.072e-9■■□□□ 14.1
NOP56-208ENST00000467857 ZNF622Q969S3 477 aaKnown RBP eCLIP10.35□□□□□ -0.754e-12■■□□□ 14.1
NOP56-208ENST00000467857 SRSF1Q07955 248 aaKnown RBP eCLIP6.95□□□□□ -1.36e-7■■□□□ 13.4
NOP56-208ENST00000467857 RBFOX2O43251 390 aaKnown RBP eCLIP7.67□□□□□ -1.182e-9■■□□□ 13.2
NOP56-208ENST00000467857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.597e-14■■□□□ 13
NOP56-208ENST00000467857 NIPBLQ6KC79 2804 aaeCLIP6.33□□□□□ -1.42e-18■■□□□ 12.6
NOP56-208ENST00000467857 FTOQ9C0B1 505 aaKnown RBP eCLIP10.51□□□□□ -0.737e-10■■□□□ 12.1
NOP56-208ENST00000467857 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.037e-13■■□□□ 11.8
NOP56-208ENST00000467857 LSM11P83369 360 aaKnown RBP eCLIP9.11□□□□□ -0.958e-8■■□□□ 11.7
NOP56-208ENST00000467857 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.43□□□□□ -1.061e-22■■□□□ 11.6
NOP56-208ENST00000467857 AARSP49588 968 aaKnown RBP eCLIP9.9□□□□□ -0.822e-7■□□□□ 10.8
NOP56-208ENST00000467857 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.77□□□□□ -1.012e-57■□□□□ 10.8
NOP56-208ENST00000467857 PPIGQ13427 754 aaKnown RBP eCLIP9.08□□□□□ -0.961e-12■□□□□ 10.5
NOP56-208ENST00000467857 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.881e-8■□□□□ 10.5
NOP56-208ENST00000467857 SF3B1O75533 1304 aaKnown RBP eCLIP9.54□□□□□ -0.883e-8■□□□□ 10.4
NOP56-208ENST00000467857 PUM1Q14671 1186 aaKnown RBP eCLIP8.63□□□□□ -1.032e-15■□□□□ 10.2
NOP56-208ENST00000467857 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.94e-14■□□□□ 10.1
NOP56-208ENST00000467857 SLBPQ14493 270 aaKnown RBP eCLIP8.83□□□□□ -11e-7■□□□□ 10.1
NOP56-208ENST00000467857 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.9□□□□□ -0.822e-36■□□□□ 9.7
NOP56-208ENST00000467857 EFTUD2Q15029 972 aaKnown RBP eCLIP9.38□□□□□ -0.915e-9■□□□□ 9.4
NOP56-208ENST00000467857 PTBP1P26599 531 aaKnown RBP eCLIP8.48□□□□□ -1.051e-44■□□□□ 9.4
NOP56-208ENST00000467857 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.56□□□□□ -0.883e-11■□□□□ 9.3
NOP56-208ENST00000467857 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.791e-323■□□□□ 9.3
NOP56-208ENST00000467857 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.12□□□□□ -0.794e-19■□□□□ 9.1
NOP56-208ENST00000467857 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.661e-6■□□□□ 8.8
NOP56-208ENST00000467857 PABPC4Q13310 644 aaKnown RBP eCLIP10.08□□□□□ -0.82e-23■□□□□ 8.8
NOP56-208ENST00000467857 GPKOWQ92917 476 aaPredicted RBP eCLIP10.34□□□□□ -0.758e-10■□□□□ 8.7
NOP56-208ENST00000467857 EIF3DO15371 548 aaKnown RBP eCLIP10.13□□□□□ -0.792e-15■□□□□ 8.4
NOP56-208ENST00000467857 CDC40O60508 579 aaKnown RBP eCLIP8.4□□□□□ -1.062e-8■□□□□ 8.3
NOP56-208ENST00000467857 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.85□□□□□ -0.991e-323■□□□□ 8
Retrieved 48 of 48 RNA–protein pairs in 15.7 ms