RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 NPC1L1Q9UHC9 1359 aa23.29■■□□□ 1.32
TRIM56-203ENST00000467847 POLRMTO00411 1230 aaKnown RBP23.29■■□□□ 1.32
TRIM56-203ENST00000467847 TM4SF1P30408 202 aa23.29■■□□□ 1.32
TRIM56-203ENST00000467847 DNAJC5GQ8N7S2 189 aa23.29■■□□□ 1.32
TRIM56-203ENST00000467847 COL15A1P39059 1388 aa23.28■■□□□ 1.32
TRIM56-203ENST00000467847 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
TRIM56-203ENST00000467847 DALRD3Q5D0E6 543 aaKnown RBP23.28■■□□□ 1.32
TRIM56-203ENST00000467847 C16orf71Q8IYS4 520 aaPredicted RBP23.28■■□□□ 1.32
TRIM56-203ENST00000467847 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
TRIM56-203ENST00000467847 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
TRIM56-203ENST00000467847 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
TRIM56-203ENST00000467847 CHRNA5P30532 468 aa23.26■■□□□ 1.31
TRIM56-203ENST00000467847 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
TRIM56-203ENST00000467847 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
TRIM56-203ENST00000467847 NMRK2Q9NPI5 230 aa23.25■■□□□ 1.31
TRIM56-203ENST00000467847 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
TRIM56-203ENST00000467847 GNAT3A8MTJ3 354 aa23.23■■□□□ 1.31
TRIM56-203ENST00000467847 NFIXQ14938 502 aa23.23■■□□□ 1.31
TRIM56-203ENST00000467847 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
TRIM56-203ENST00000467847 NRXN2Q9P2S2 1712 aa23.22■■□□□ 1.31
TRIM56-203ENST00000467847 SIPA1L3O60292 1781 aaPredicted RBP23.22■■□□□ 1.31
TRIM56-203ENST00000467847 STARD3NLO95772 234 aa23.22■■□□□ 1.31
TRIM56-203ENST00000467847 CANXP27824 592 aaKnown RBP23.22■■□□□ 1.31
TRIM56-203ENST00000467847 TEFQ10587 303 aa23.22■■□□□ 1.31
TRIM56-203ENST00000467847 CAPN15O75808 1086 aa23.21■■□□□ 1.31
TRIM56-203ENST00000467847 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
TRIM56-203ENST00000467847 RBM46Q8TBY0 533 aaKnown RBP23.21■■□□□ 1.31
TRIM56-203ENST00000467847 BCL2L12Q9HB09 334 aa23.2■■□□□ 1.3
TRIM56-203ENST00000467847 SBF1O95248 1867 aa23.19■■□□□ 1.3
TRIM56-203ENST00000467847 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
TRIM56-203ENST00000467847 KLRG1Q96E93 195 aa23.19■■□□□ 1.3
TRIM56-203ENST00000467847 ZNF496Q96IT1 587 aaPredicted RBP23.19■■□□□ 1.3
TRIM56-203ENST00000467847 RNF181Q9P0P0 153 aa23.19■■□□□ 1.3
TRIM56-203ENST00000467847 DLEC1Q9Y238 1755 aa23.19■■□□□ 1.3
TRIM56-203ENST00000467847 SERPINB2P05120 415 aa23.18■■□□□ 1.3
TRIM56-203ENST00000467847 CFAP53Q96M91 514 aa23.18■■□□□ 1.3
TRIM56-203ENST00000467847 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
TRIM56-203ENST00000467847 A0A087WZG4 1122 aa23.17■■□□□ 1.3
TRIM56-203ENST00000467847 EIF5P55010 431 aaKnown RBP23.17■■□□□ 1.3
TRIM56-203ENST00000467847 COL13A1Q5TAT6 717 aaPredicted RBP23.17■■□□□ 1.3
TRIM56-203ENST00000467847 HTRA3P83110 453 aa23.16■■□□□ 1.3
TRIM56-203ENST00000467847 FSTL1Q12841 308 aa23.16■■□□□ 1.3
TRIM56-203ENST00000467847 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
TRIM56-203ENST00000467847 TEX13AQ9BXU3 409 aaPredicted RBP23.16■■□□□ 1.3
TRIM56-203ENST00000467847 KDM2BQ8NHM5 1336 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 PRKAR2BP31323 418 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 TNS4Q8IZW8 715 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 PHACTR3Q96KR7 559 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 ZNF330Q9Y3S2 320 aaPredicted RBP23.15■■□□□ 1.3
TRIM56-203ENST00000467847 WDR90Q96KV7 1748 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 SCN7AQ01118 1682 aa23.15■■□□□ 1.3
TRIM56-203ENST00000467847 FMNL2Q96PY5 1086 aa23.14■■□□□ 1.29
TRIM56-203ENST00000467847 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
TRIM56-203ENST00000467847 RSPH6AQ9H0K4 717 aa23.13■■□□□ 1.29
TRIM56-203ENST00000467847 CARMIL3Q8ND23 1372 aa23.13■■□□□ 1.29
TRIM56-203ENST00000467847 C2CD5Q86YS7 1000 aa23.12■■□□□ 1.29
TRIM56-203ENST00000467847 JMYQ8N9B5 988 aa23.12■■□□□ 1.29
TRIM56-203ENST00000467847 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
TRIM56-203ENST00000467847 BTBD11A6QL63 1104 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 H0YIN7 160 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 RASSF7Q02833 373 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 TTLL6Q8N841 843 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 TBC1D2BQ9UPU7 963 aa23.11■■□□□ 1.29
TRIM56-203ENST00000467847 TNRC6CQ9HCJ0 1690 aaKnown RBP23.11■■□□□ 1.29
TRIM56-203ENST00000467847 IL6STP40189 918 aaPredicted RBP23.1■■□□□ 1.29
TRIM56-203ENST00000467847 NPM2Q86SE8 214 aaKnown RBP23.1■■□□□ 1.29
TRIM56-203ENST00000467847 ANKRD31Q8N7Z5 1873 aa23.1■■□□□ 1.29
TRIM56-203ENST00000467847 A1BGP04217 495 aa23.09■■□□□ 1.29
TRIM56-203ENST00000467847 U2AF1L5P0DN76 240 aaPredicted RBP23.09■■□□□ 1.29
TRIM56-203ENST00000467847 U2AF1Q01081 240 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM56-203ENST00000467847 KCNQ3O43525 872 aa23.08■■□□□ 1.29
TRIM56-203ENST00000467847 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
TRIM56-203ENST00000467847 RRAGCQ9HB90 399 aa23.08■■□□□ 1.29
TRIM56-203ENST00000467847 CCDC88AQ3V6T2 1871 aa23.08■■□□□ 1.29
TRIM56-203ENST00000467847 LMNB1P20700 586 aa23.07■■□□□ 1.28
TRIM56-203ENST00000467847 ZC3H4Q9UPT8 1303 aaKnown RBP23.07■■□□□ 1.28
TRIM56-203ENST00000467847 RTF1Q92541 710 aaKnown RBP23.06■■□□□ 1.28
TRIM56-203ENST00000467847 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
TRIM56-203ENST00000467847 COL11A2P13942 1736 aaPredicted RBP23.05■■□□□ 1.28
TRIM56-203ENST00000467847 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 PDE6BP35913 854 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 PRELPP51888 382 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 SMC1BQ8NDV3 1235 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
TRIM56-203ENST00000467847 CAMTA2O94983 1202 aa23.04■■□□□ 1.28
TRIM56-203ENST00000467847 MCM10Q7L590 875 aa23.04■■□□□ 1.28
TRIM56-203ENST00000467847 CCDC24Q8N4L8 307 aa23.04■■□□□ 1.28
TRIM56-203ENST00000467847 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
TRIM56-203ENST00000467847 SETDB2Q96T68 719 aa23.04■■□□□ 1.28
TRIM56-203ENST00000467847 PDZRN3Q9UPQ7 1066 aa23.04■■□□□ 1.28
TRIM56-203ENST00000467847 NPHP1O15259 732 aa23.03■■□□□ 1.28
TRIM56-203ENST00000467847 DZIP3Q86Y13 1208 aaKnown RBP23.03■■□□□ 1.28
TRIM56-203ENST00000467847 PIP4K2AP48426 406 aaPredicted RBP23.02■■□□□ 1.28
TRIM56-203ENST00000467847 CNBD1Q8NA66 436 aa23.02■■□□□ 1.28
TRIM56-203ENST00000467847 USP16Q9Y5T5 823 aa23.02■■□□□ 1.28
TRIM56-203ENST00000467847 PRAMEF22A3QJZ6 481 aa23.01■■□□□ 1.27
TRIM56-203ENST00000467847 NFKBIEO00221 500 aa23.01■■□□□ 1.27
TRIM56-203ENST00000467847 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms