RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 MAP1SQ66K74 1059 aaPredicted RBP18.11■□□□□ 0.49
UBR4-210ENST00000466969 L3MBTL3Q96JM7 780 aaPredicted RBP18.11■□□□□ 0.49
UBR4-210ENST00000466969 RBM42Q9BTD8 480 aaKnown RBP18.11■□□□□ 0.49
UBR4-210ENST00000466969 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
UBR4-210ENST00000466969 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
UBR4-210ENST00000466969 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
UBR4-210ENST00000466969 PNMA8AQ86V59 439 aaPredicted RBP18.1■□□□□ 0.49
UBR4-210ENST00000466969 EDC4Q6P2E9 1401 aaKnown RBP18.09■□□□□ 0.49
UBR4-210ENST00000466969 H0YIN7 160 aa18.09■□□□□ 0.49
UBR4-210ENST00000466969 C2CD5Q86YS7 1000 aa18.09■□□□□ 0.49
UBR4-210ENST00000466969 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
UBR4-210ENST00000466969 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
UBR4-210ENST00000466969 TM4SF1P30408 202 aa18.08■□□□□ 0.48
UBR4-210ENST00000466969 KDRP35968 1356 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 AOC2O75106 756 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 EPHX2P34913 555 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 TMC1Q8TDI8 760 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 COG3Q96JB2 828 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 TAOK3Q9H2K8 898 aa18.07■□□□□ 0.48
UBR4-210ENST00000466969 RTL1A6NKG5 1358 aa18.06■□□□□ 0.48
UBR4-210ENST00000466969 C21orf2O43822 256 aa18.06■□□□□ 0.48
UBR4-210ENST00000466969 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
UBR4-210ENST00000466969 DLEC1Q9Y238 1755 aa18.06■□□□□ 0.48
UBR4-210ENST00000466969 LTBP3Q9NS15 1303 aa18.05■□□□□ 0.48
UBR4-210ENST00000466969 FBLN1P23142 703 aa18.05■□□□□ 0.48
UBR4-210ENST00000466969 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
UBR4-210ENST00000466969 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
UBR4-210ENST00000466969 ZPR1O75312 459 aa18.03■□□□□ 0.48
UBR4-210ENST00000466969 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.48
UBR4-210ENST00000466969 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
UBR4-210ENST00000466969 FER1L6Q2WGJ9 1857 aa18.02■□□□□ 0.48
UBR4-210ENST00000466969 ZNF622Q969S3 477 aaKnown RBP eCLIP18.02■□□□□ 0.48
UBR4-210ENST00000466969 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
UBR4-210ENST00000466969 TLL2Q9Y6L7 1015 aa18.01■□□□□ 0.47
UBR4-210ENST00000466969 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
UBR4-210ENST00000466969 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
UBR4-210ENST00000466969 FXR1P51114 621 aaKnown RBP eCLIP18■□□□□ 0.475e-7■■■■□ 21
UBR4-210ENST00000466969 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
UBR4-210ENST00000466969 SERPINB2P05120 415 aa17.99■□□□□ 0.47
UBR4-210ENST00000466969 CRKLP46109 303 aaKnown RBP17.99■□□□□ 0.47
UBR4-210ENST00000466969 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
UBR4-210ENST00000466969 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
UBR4-210ENST00000466969 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
UBR4-210ENST00000466969 RNF123Q5XPI4 1314 aa17.98■□□□□ 0.47
UBR4-210ENST00000466969 NFIXQ14938 502 aa17.97■□□□□ 0.47
UBR4-210ENST00000466969 CIAPIN1Q6FI81 312 aa17.97■□□□□ 0.47
UBR4-210ENST00000466969 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
UBR4-210ENST00000466969 A0A1W2PP64 1363 aa17.96■□□□□ 0.47
UBR4-210ENST00000466969 FMR1Q06787 632 aaKnown RBP eCLIP17.96■□□□□ 0.471e-12■□□□□ 10.1
UBR4-210ENST00000466969 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
UBR4-210ENST00000466969 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
UBR4-210ENST00000466969 CST9Q5W186 159 aa17.95■□□□□ 0.46
UBR4-210ENST00000466969 ZNF541Q9H0D2 1346 aa17.95■□□□□ 0.46
UBR4-210ENST00000466969 INSRP06213 1382 aa17.94■□□□□ 0.46
UBR4-210ENST00000466969 PHKG2P15735 406 aa17.94■□□□□ 0.46
UBR4-210ENST00000466969 HSP90AB2PQ58FF8 381 aa17.94■□□□□ 0.46
UBR4-210ENST00000466969 SLC17A8Q8NDX2 589 aa17.94■□□□□ 0.46
UBR4-210ENST00000466969 NRXN2Q9P2S2 1712 aa17.94■□□□□ 0.46
UBR4-210ENST00000466969 SAPCD2Q86UD0 394 aa17.93■□□□□ 0.46
UBR4-210ENST00000466969 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.93■□□□□ 0.46
UBR4-210ENST00000466969 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
UBR4-210ENST00000466969 PDE6BP35913 854 aa17.92■□□□□ 0.46
UBR4-210ENST00000466969 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
UBR4-210ENST00000466969 HHIPL1Q96JK4 782 aa17.92■□□□□ 0.46
UBR4-210ENST00000466969 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
UBR4-210ENST00000466969 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
UBR4-210ENST00000466969 ERVV-2B6SEH9 535 aa17.9■□□□□ 0.46
UBR4-210ENST00000466969 TRAF5O00463 557 aa17.9■□□□□ 0.46
UBR4-210ENST00000466969 CTU1Q7Z7A3 348 aaKnown RBP17.9■□□□□ 0.46
UBR4-210ENST00000466969 LMOD1P29536 600 aaPredicted RBP17.89■□□□□ 0.45
UBR4-210ENST00000466969 NOGQ13253 232 aa17.89■□□□□ 0.45
UBR4-210ENST00000466969 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
UBR4-210ENST00000466969 HPS5Q9UPZ3 1129 aa17.89■□□□□ 0.45
UBR4-210ENST00000466969 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
UBR4-210ENST00000466969 GPC2Q8N158 579 aa17.88■□□□□ 0.45
UBR4-210ENST00000466969 NARFQ9UHQ1 456 aa17.88■□□□□ 0.45
UBR4-210ENST00000466969 FLT4P35916 1363 aa17.88■□□□□ 0.45
UBR4-210ENST00000466969 CELF2O95319 508 aaKnown RBP17.87■□□□□ 0.45
UBR4-210ENST00000466969 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
UBR4-210ENST00000466969 INTS5Q6P9B9 1019 aaKnown RBP17.87■□□□□ 0.45
UBR4-210ENST00000466969 BRIP1Q9BX63 1249 aa17.87■□□□□ 0.45
UBR4-210ENST00000466969 SAGE1Q9NXZ1 904 aa17.87■□□□□ 0.45
UBR4-210ENST00000466969 PRPF40BQ6NWY9 871 aaKnown RBP17.86■□□□□ 0.45
UBR4-210ENST00000466969 CABP4P57796 275 aa17.85■□□□□ 0.45
UBR4-210ENST00000466969 CCDC93Q567U6 631 aa17.85■□□□□ 0.45
UBR4-210ENST00000466969 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
UBR4-210ENST00000466969 ZNF277Q9NRM2 450 aaPredicted RBP17.84■□□□□ 0.45
UBR4-210ENST00000466969 A0A0C4DFX4 3053 aa17.83■□□□□ 0.45
UBR4-210ENST00000466969 ROCK2O75116 1388 aaKnown RBP17.83■□□□□ 0.45
UBR4-210ENST00000466969 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
UBR4-210ENST00000466969 FZD9O00144 591 aa17.83■□□□□ 0.44
UBR4-210ENST00000466969 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
UBR4-210ENST00000466969 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
UBR4-210ENST00000466969 CUL9Q8IWT3 2517 aa17.83■□□□□ 0.44
UBR4-210ENST00000466969 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 TONSLQ96HA7 1378 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 PKN2Q16513 984 aaKnown RBP17.82■□□□□ 0.44
UBR4-210ENST00000466969 STYK1Q6J9G0 422 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 USP50Q70EL3 339 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms