RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 USP44Q9H0E7 712 aa15.69■□□□□ 0.1
PDZRN3-205ENST00000466780 CEP170BQ9Y4F5 1589 aaPredicted RBP15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 MAP4K4O95819 1239 aaPredicted RBP15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
PDZRN3-205ENST00000466780 LTKP29376 864 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 CCDC183Q5T5S1 534 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 TTC14Q96N46 770 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 FMN2Q9NZ56 1722 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 ZBTB7CA1YPR0 619 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 EYA1Q99502 592 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 SNX14Q9Y5W7 946 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 RAD50Q92878 1312 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 SSH3Q8TE77 659 aa15.67■□□□□ 0.1
PDZRN3-205ENST00000466780 LRRC37A3O60309 1634 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 SGSM2O43147 1006 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 HCLS1P14317 486 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 PIBF1Q8WXW3 757 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 JARID2Q92833 1246 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 IGSF1Q8N6C5 1336 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 ADCY5O95622 1261 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 AK2P54819 239 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 MTERF4Q7Z6M4 381 aaKnown RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 MYRIPQ8NFW9 859 aa15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 N4BP2Q86UW6 1770 aaPredicted RBP15.66■□□□□ 0.1
PDZRN3-205ENST00000466780 RUFY3Q7L099 469 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 LSG1Q9H089 658 aaKnown RBP15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 TTC12Q9H892 705 aaPredicted RBP15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 UBTFL1P0CB47 393 aaPredicted RBP15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 SYT1P21579 422 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 TPRNQ4KMQ1 711 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 ARID3AQ99856 593 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 SBNO1A3KN83 1393 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 FLT4P35916 1363 aa15.65■□□□□ 0.1
PDZRN3-205ENST00000466780 C17orf53Q8N3J3 647 aaPredicted RBP15.64■□□□□ 0.09
PDZRN3-205ENST00000466780 STX6O43752 255 aa15.64■□□□□ 0.09
PDZRN3-205ENST00000466780 UBE2HP62256 183 aa15.64■□□□□ 0.09
PDZRN3-205ENST00000466780 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDZRN3-205ENST00000466780 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
PDZRN3-205ENST00000466780 SURF6O75683 361 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 ADAMTS13Q76LX8 1427 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 CACNA1FO60840 1977 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 HTATSF1O43719 755 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 F13A1P00488 732 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 POLA2Q14181 598 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 DNTTIP2Q5QJE6 756 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 RHPN1Q8TCX5 695 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 FUCA2Q9BTY2 467 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 PRDM4Q9UKN5 801 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 LIMCH1Q9UPQ0 1083 aa15.63■□□□□ 0.09
PDZRN3-205ENST00000466780 RAB11FIP3O75154 756 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 LARGE1O95461 756 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 TSC1Q92574 1164 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 FIBPO43427 364 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 LETM1O95202 739 aaPredicted RBP15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 CPA1P15085 419 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 IL17REQ8NFR9 667 aa15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 PHAXQ9H814 394 aaKnown RBP15.62■□□□□ 0.09
PDZRN3-205ENST00000466780 GNAT3A8MTJ3 354 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 DTNBO60941 627 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 KDM4AO75164 1064 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 AP5Z1O43299 807 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 PRIMPOLQ96LW4 560 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 SPTLC3Q9NUV7 552 aa15.61■□□□□ 0.09
PDZRN3-205ENST00000466780 AMPHP49418 695 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 ZNF710Q8N1W2 664 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 SPG7Q9UQ90 795 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 SMC3Q9UQE7 1217 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 AMOTL2Q9Y2J4 779 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 GIMAP6Q6P9H5 292 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 KIF13AQ9H1H9 1805 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 UBR1Q8IWV7 1749 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 TTC21AQ8NDW8 1320 aa15.6■□□□□ 0.09
PDZRN3-205ENST00000466780 CWC27Q6UX04 472 aaKnown RBP15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 PLEKHG1Q9ULL1 1385 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 GTF2F1P35269 517 aaKnown RBP eCLIP15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 HMGN5P82970 282 aaKnown RBP15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 CNTROBQ8N137 903 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 HYPKQ9NX55 129 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 SRGAP3O43295 1099 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 DNM1Q05193 864 aaKnown RBP15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 KIF1BPQ96EK5 621 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
PDZRN3-205ENST00000466780 CRYBG1Q9Y4K1 1723 aa15.58■□□□□ 0.09
PDZRN3-205ENST00000466780 NBPF7P0C2Y1 421 aaPredicted RBP15.58■□□□□ 0.08
PDZRN3-205ENST00000466780 CASTP20810 708 aaKnown RBP15.58■□□□□ 0.08
PDZRN3-205ENST00000466780 HDGFL1Q5TGJ6 251 aa15.58■□□□□ 0.08
PDZRN3-205ENST00000466780 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms