RNA–Protein interactions for RNA: ENST00000466072.5

PCCB-207, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,844 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-207ENST00000466072 FLAD1Q8NFF5 587 aa23.12■■□□□ 1.29
PCCB-207ENST00000466072 CCDC87Q9NVE4 849 aa23.12■■□□□ 1.29
PCCB-207ENST00000466072 ZBTB1Q9Y2K1 713 aa23.12■■□□□ 1.29
PCCB-207ENST00000466072 CICQ96RK0 1608 aaPredicted RBP23.12■■□□□ 1.29
PCCB-207ENST00000466072 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
PCCB-207ENST00000466072 TRAPPC3LQ5T215 181 aa23.1■■□□□ 1.29
PCCB-207ENST00000466072 PPP1R1BQ9UD71 204 aaPredicted RBP23.1■■□□□ 1.29
PCCB-207ENST00000466072 A1BGP04217 495 aa23.08■■□□□ 1.29
PCCB-207ENST00000466072 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
PCCB-207ENST00000466072 PIP4K2AP48426 406 aaPredicted RBP23.08■■□□□ 1.29
PCCB-207ENST00000466072 LMOD3Q0VAK6 560 aa23.08■■□□□ 1.28
PCCB-207ENST00000466072 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.28
PCCB-207ENST00000466072 SRP68Q9UHB9 627 aaKnown RBP23.08■■□□□ 1.28
PCCB-207ENST00000466072 SOS1Q07889 1333 aaPredicted RBP23.07■■□□□ 1.28
PCCB-207ENST00000466072 EIF4A1P60842 406 aaKnown RBP23.06■■□□□ 1.28
PCCB-207ENST00000466072 ARXQ96QS3 562 aa23.06■■□□□ 1.28
PCCB-207ENST00000466072 TSPYL4Q9UJ04 414 aa23.06■■□□□ 1.28
PCCB-207ENST00000466072 STARD3NLO95772 234 aa23.05■■□□□ 1.28
PCCB-207ENST00000466072 KDM3BQ7LBC6 1761 aa23.05■■□□□ 1.28
PCCB-207ENST00000466072 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
PCCB-207ENST00000466072 RFC4P35249 363 aa23.05■■□□□ 1.28
PCCB-207ENST00000466072 LAS1LQ9Y4W2 734 aaKnown RBP23.05■■□□□ 1.28
PCCB-207ENST00000466072 COL24A1Q17RW2 1714 aa23.04■■□□□ 1.28
PCCB-207ENST00000466072 ADRA2BP18089 450 aa23.03■■□□□ 1.28
PCCB-207ENST00000466072 TEX13AQ9BXU3 409 aaPredicted RBP23.03■■□□□ 1.28
PCCB-207ENST00000466072 FHDC1Q9C0D6 1143 aaPredicted RBP23.03■■□□□ 1.28
PCCB-207ENST00000466072 GYS1P13807 737 aa23.03■■□□□ 1.28
PCCB-207ENST00000466072 POLD1P28340 1107 aa23.03■■□□□ 1.28
PCCB-207ENST00000466072 GIGYF1O75420 1035 aaPredicted RBP23.02■■□□□ 1.28
PCCB-207ENST00000466072 KRT24Q2M2I5 525 aa23.02■■□□□ 1.28
PCCB-207ENST00000466072 C4AP0C0L4 1744 aa23.02■■□□□ 1.27
PCCB-207ENST00000466072 CHL1O00533 1208 aa23.01■■□□□ 1.27
PCCB-207ENST00000466072 EIF5P55010 431 aaKnown RBP23.01■■□□□ 1.27
PCCB-207ENST00000466072 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
PCCB-207ENST00000466072 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
PCCB-207ENST00000466072 COL15A1P39059 1388 aa23■■□□□ 1.27
PCCB-207ENST00000466072 NBPF26B4DH59 902 aa23■■□□□ 1.27
PCCB-207ENST00000466072 FKBP8Q14318 412 aa23■■□□□ 1.27
PCCB-207ENST00000466072 USPL1Q5W0Q7 1092 aa23■■□□□ 1.27
PCCB-207ENST00000466072 NBPF10Q6P3W6 841 aaKnown RBP23■■□□□ 1.27
PCCB-207ENST00000466072 KLHL34Q8N239 644 aa23■■□□□ 1.27
PCCB-207ENST00000466072 NBPF15Q8N660 670 aa23■■□□□ 1.27
PCCB-207ENST00000466072 USP42Q9H9J4 1324 aaKnown RBP23■■□□□ 1.27
PCCB-207ENST00000466072 SYT17Q9BSW7 474 aa22.98■■□□□ 1.27
PCCB-207ENST00000466072 MMP10P09238 476 aa22.98■■□□□ 1.27
PCCB-207ENST00000466072 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
PCCB-207ENST00000466072 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
PCCB-207ENST00000466072 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
PCCB-207ENST00000466072 ZNF853P0CG23 659 aa22.96■■□□□ 1.27
PCCB-207ENST00000466072 CFAP44Q96MT7 982 aa22.96■■□□□ 1.27
PCCB-207ENST00000466072 MBIPQ9NS73 344 aa22.96■■□□□ 1.27
PCCB-207ENST00000466072 NARFQ9UHQ1 456 aa22.96■■□□□ 1.27
PCCB-207ENST00000466072 IL6STP40189 918 aaPredicted RBP22.95■■□□□ 1.26
PCCB-207ENST00000466072 WWC1Q8IX03 1113 aa22.95■■□□□ 1.26
PCCB-207ENST00000466072 NLGN1Q8N2Q7 840 aa22.95■■□□□ 1.26
PCCB-207ENST00000466072 ZPR1O75312 459 aa22.94■■□□□ 1.26
PCCB-207ENST00000466072 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
PCCB-207ENST00000466072 EIF2S2P20042 333 aaKnown RBP22.93■■□□□ 1.26
PCCB-207ENST00000466072 NECTIN2Q92692 538 aa22.93■■□□□ 1.26
PCCB-207ENST00000466072 DDR1Q08345 913 aa22.92■■□□□ 1.26
PCCB-207ENST00000466072 NGEFQ8N5V2 710 aa22.92■■□□□ 1.26
PCCB-207ENST00000466072 GOLGB1Q14789 3259 aaKnown RBP22.92■■□□□ 1.26
PCCB-207ENST00000466072 UTRNP46939 3433 aa22.91■■□□□ 1.26
PCCB-207ENST00000466072 TM4SF1P30408 202 aa22.91■■□□□ 1.26
PCCB-207ENST00000466072 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
PCCB-207ENST00000466072 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
PCCB-207ENST00000466072 ANXA1P04083 346 aa22.9■■□□□ 1.26
PCCB-207ENST00000466072 MYL6BP14649 208 aa22.9■■□□□ 1.26
PCCB-207ENST00000466072 CAMTA2O94983 1202 aa22.89■■□□□ 1.26
PCCB-207ENST00000466072 NFIXQ14938 502 aa22.89■■□□□ 1.26
PCCB-207ENST00000466072 PROSER3Q2NL68 480 aa22.89■■□□□ 1.26
PCCB-207ENST00000466072 DZIP3Q86Y13 1208 aaKnown RBP22.89■■□□□ 1.26
PCCB-207ENST00000466072 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.26
PCCB-207ENST00000466072 LAMB4A4D0S4 1761 aa22.89■■□□□ 1.26
PCCB-207ENST00000466072 A0A087WZG4 1122 aa22.89■■□□□ 1.25
PCCB-207ENST00000466072 PDIA6Q15084 440 aa22.89■■□□□ 1.25
PCCB-207ENST00000466072 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.25
PCCB-207ENST00000466072 ELL2O00472 640 aaPredicted RBP22.88■■□□□ 1.25
PCCB-207ENST00000466072 GNAI1P63096 354 aa22.88■■□□□ 1.25
PCCB-207ENST00000466072 TBC1D9BQ66K14 1250 aa22.87■■□□□ 1.25
PCCB-207ENST00000466072 POLRMTO00411 1230 aaKnown RBP22.87■■□□□ 1.25
PCCB-207ENST00000466072 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
PCCB-207ENST00000466072 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
PCCB-207ENST00000466072 DUSP27Q5VZP5 1158 aa22.86■■□□□ 1.25
PCCB-207ENST00000466072 TTLL7Q6ZT98 887 aa22.86■■□□□ 1.25
PCCB-207ENST00000466072 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
PCCB-207ENST00000466072 C8orf58Q8NAV2 365 aa22.86■■□□□ 1.25
PCCB-207ENST00000466072 SPINK5Q9NQ38 1064 aaPredicted RBP22.86■■□□□ 1.25
PCCB-207ENST00000466072 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
PCCB-207ENST00000466072 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
PCCB-207ENST00000466072 HLFQ16534 295 aa22.85■■□□□ 1.25
PCCB-207ENST00000466072 NPM2Q86SE8 214 aaKnown RBP22.85■■□□□ 1.25
PCCB-207ENST00000466072 WWC3Q9ULE0 1092 aa22.85■■□□□ 1.25
PCCB-207ENST00000466072 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
PCCB-207ENST00000466072 TSPYL6Q8N831 410 aa22.84■■□□□ 1.25
PCCB-207ENST00000466072 CD2APQ9Y5K6 639 aa22.84■■□□□ 1.25
PCCB-207ENST00000466072 SCN7AQ01118 1682 aa22.82■■□□□ 1.24
PCCB-207ENST00000466072 HDGFL1Q5TGJ6 251 aa22.81■■□□□ 1.24
PCCB-207ENST00000466072 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
PCCB-207ENST00000466072 SERPINB2P05120 415 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms