RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 CHD1O14646 1710 aa16.65■□□□□ 0.26
TGFBR3-204ENST00000465892 CWC27Q6UX04 472 aaKnown RBP16.65■□□□□ 0.26
TGFBR3-204ENST00000465892 NECAB1Q8N987 351 aa16.65■□□□□ 0.26
TGFBR3-204ENST00000465892 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
TGFBR3-204ENST00000465892 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
TGFBR3-204ENST00000465892 LIG1P18858 919 aa16.64■□□□□ 0.25
TGFBR3-204ENST00000465892 CASTP20810 708 aaKnown RBP16.64■□□□□ 0.25
TGFBR3-204ENST00000465892 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
TGFBR3-204ENST00000465892 PTPRCP08575 1304 aa16.64■□□□□ 0.25
TGFBR3-204ENST00000465892 CHL1O00533 1208 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 KCNJ4P48050 445 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 CCDC112Q8NEF3 446 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 FOXO3O43524 673 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 ANO6Q4KMQ2 910 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 SLFN14P0C7P3 912 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 MRVI1Q9Y6F6 885 aa16.63■□□□□ 0.25
TGFBR3-204ENST00000465892 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 TYRO3Q06418 890 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 FAM200AQ8TCP9 573 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 MTMR6Q9Y217 621 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 TRERF1Q96PN7 1200 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 ATP6V1DQ9Y5K8 247 aa16.62■□□□□ 0.25
TGFBR3-204ENST00000465892 TPM3P06753 285 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 SMTNL1A8MU46 457 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 MAP3K11Q16584 847 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 ZSCAN25Q6NSZ9 544 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 TTC14Q96N46 770 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
TGFBR3-204ENST00000465892 USP27XA6NNY8 438 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 CACTINQ8WUQ7 758 aaKnown RBP16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 NUP62CLQ9H1M0 184 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 COG3Q96JB2 828 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
TGFBR3-204ENST00000465892 PDE4CQ08493 712 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 CCDC144BQ3MJ40 725 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 CCDC144CPQ8IYA2 1237 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 TRMT1Q9NXH9 659 aaKnown RBP16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 PTPRMP28827 1452 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 CDK11BP21127 795 aaKnown RBP16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 TCEANC2Q96MN5 208 aa16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
TGFBR3-204ENST00000465892 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 DNAJC25Q9H1X3 360 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 ANKRD26Q9UPS8 1709 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 RAD50Q92878 1312 aa16.58■□□□□ 0.24
TGFBR3-204ENST00000465892 GOLGA6L4A6NEF3 574 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 SGSM2O43147 1006 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 ATP8B2P98198 1209 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 TERF2Q15554 542 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 LARP1BQ659C4 914 aaKnown RBP16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 HYPKQ9NX55 129 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 A0A087WWV3 80 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
TGFBR3-204ENST00000465892 ZNF75DP51815 510 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 KIDINS220Q9ULH0 1771 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 ME3Q16798 604 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 PDRG1Q9NUG6 133 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 NAP1L2Q9ULW6 460 aaPredicted RBP16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 IRX5P78411 483 aaPredicted RBP16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 PTH1RQ03431 593 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 STAP2Q9UGK3 403 aa16.56■□□□□ 0.24
TGFBR3-204ENST00000465892 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 ELF2Q15723 593 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 STAG3Q9UJ98 1225 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 MORC2Q9Y6X9 1032 aaPredicted RBP16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 ZNF165P49910 485 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 STK31Q9BXU1 1019 aa16.55■□□□□ 0.24
TGFBR3-204ENST00000465892 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms