RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
PTPN7-205ENST00000464870 KCNQ3O43525 872 aa15.96■□□□□ 0.15
PTPN7-205ENST00000464870 PHF14O94880 888 aa15.96■□□□□ 0.15
PTPN7-205ENST00000464870 CRKLP46109 303 aaKnown RBP15.96■□□□□ 0.15
PTPN7-205ENST00000464870 EXOSC9Q06265 439 aaKnown RBP15.96■□□□□ 0.15
PTPN7-205ENST00000464870 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
PTPN7-205ENST00000464870 STARD3NLO95772 234 aa15.95■□□□□ 0.14
PTPN7-205ENST00000464870 HEG1Q9ULI3 1381 aa15.95■□□□□ 0.14
PTPN7-205ENST00000464870 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-205ENST00000464870 KRT24Q2M2I5 525 aa15.94■□□□□ 0.14
PTPN7-205ENST00000464870 TRAPPC3LQ5T215 181 aa15.94■□□□□ 0.14
PTPN7-205ENST00000464870 CCDC87Q9NVE4 849 aa15.94■□□□□ 0.14
PTPN7-205ENST00000464870 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
PTPN7-205ENST00000464870 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
PTPN7-205ENST00000464870 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
PTPN7-205ENST00000464870 C5P01031 1676 aa15.93■□□□□ 0.14
PTPN7-205ENST00000464870 ADRA2BP18089 450 aa15.93■□□□□ 0.14
PTPN7-205ENST00000464870 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
PTPN7-205ENST00000464870 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
PTPN7-205ENST00000464870 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-205ENST00000464870 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
PTPN7-205ENST00000464870 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
PTPN7-205ENST00000464870 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 AMIGO3Q86WK7 504 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 C8orf58Q8NAV2 365 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 BABAM1Q9NWV8 329 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 ZNF831Q5JPB2 1677 aa15.92■□□□□ 0.14
PTPN7-205ENST00000464870 POLD1P28340 1107 aa15.91■□□□□ 0.14
PTPN7-205ENST00000464870 RFC4P35249 363 aa15.91■□□□□ 0.14
PTPN7-205ENST00000464870 PTGER2P43116 358 aa15.9■□□□□ 0.14
PTPN7-205ENST00000464870 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
PTPN7-205ENST00000464870 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
PTPN7-205ENST00000464870 EIF4A1P60842 406 aaKnown RBP15.89■□□□□ 0.13
PTPN7-205ENST00000464870 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
PTPN7-205ENST00000464870 ZBTB1Q9Y2K1 713 aa15.89■□□□□ 0.13
PTPN7-205ENST00000464870 USP16Q9Y5T5 823 aa15.89■□□□□ 0.13
PTPN7-205ENST00000464870 SIPA1L3O60292 1781 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-205ENST00000464870 CASZ1Q86V15 1759 aa15.89■□□□□ 0.13
PTPN7-205ENST00000464870 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
PTPN7-205ENST00000464870 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
PTPN7-205ENST00000464870 RCAN3Q9UKA8 241 aa15.88■□□□□ 0.13
PTPN7-205ENST00000464870 LRP5O75197 1615 aa15.87■□□□□ 0.13
PTPN7-205ENST00000464870 VAMP4O75379 141 aa15.87■□□□□ 0.13
PTPN7-205ENST00000464870 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
PTPN7-205ENST00000464870 ARXQ96QS3 562 aa15.87■□□□□ 0.13
PTPN7-205ENST00000464870 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
PTPN7-205ENST00000464870 SOS1Q07889 1333 aaPredicted RBP15.87■□□□□ 0.13
PTPN7-205ENST00000464870 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
PTPN7-205ENST00000464870 PRAMEF22A3QJZ6 481 aa15.86■□□□□ 0.13
PTPN7-205ENST00000464870 TCERG1O14776 1098 aaKnown RBP15.86■□□□□ 0.13
PTPN7-205ENST00000464870 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-205ENST00000464870 A1BGP04217 495 aa15.86■□□□□ 0.13
PTPN7-205ENST00000464870 NLGN1Q8N2Q7 840 aa15.86■□□□□ 0.13
PTPN7-205ENST00000464870 SUPT16HQ9Y5B9 1047 aaKnown RBP15.86■□□□□ 0.13
PTPN7-205ENST00000464870 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-205ENST00000464870 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
PTPN7-205ENST00000464870 A0A087WZG4 1122 aa15.85■□□□□ 0.13
PTPN7-205ENST00000464870 ZPR1O75312 459 aa15.85■□□□□ 0.13
PTPN7-205ENST00000464870 IL6STP40189 918 aaPredicted RBP15.85■□□□□ 0.13
PTPN7-205ENST00000464870 ZNF330Q9Y3S2 320 aaPredicted RBP15.85■□□□□ 0.13
PTPN7-205ENST00000464870 TJP1Q07157 1748 aa15.85■□□□□ 0.13
PTPN7-205ENST00000464870 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
PTPN7-205ENST00000464870 BCAR3O75815 825 aa15.84■□□□□ 0.13
PTPN7-205ENST00000464870 RARSP54136 660 aaKnown RBP15.84■□□□□ 0.13
PTPN7-205ENST00000464870 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
PTPN7-205ENST00000464870 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
PTPN7-205ENST00000464870 COL15A1P39059 1388 aa15.84■□□□□ 0.13
PTPN7-205ENST00000464870 COL5A3P25940 1745 aaPredicted RBP15.83■□□□□ 0.13
PTPN7-205ENST00000464870 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
PTPN7-205ENST00000464870 GYS1P13807 737 aa15.83■□□□□ 0.12
PTPN7-205ENST00000464870 NECTIN2Q92692 538 aa15.83■□□□□ 0.12
PTPN7-205ENST00000464870 SRP68Q9UHB9 627 aaKnown RBP15.83■□□□□ 0.12
PTPN7-205ENST00000464870 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
PTPN7-205ENST00000464870 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
PTPN7-205ENST00000464870 TUBGCP6Q96RT7 1819 aa15.82■□□□□ 0.12
PTPN7-205ENST00000464870 UBR3Q6ZT12 1888 aa15.82■□□□□ 0.12
PTPN7-205ENST00000464870 EIF2S2P20042 333 aaKnown RBP15.82■□□□□ 0.12
PTPN7-205ENST00000464870 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
PTPN7-205ENST00000464870 USPL1Q5W0Q7 1092 aa15.81■□□□□ 0.12
PTPN7-205ENST00000464870 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
PTPN7-205ENST00000464870 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
PTPN7-205ENST00000464870 MMP10P09238 476 aa15.8■□□□□ 0.12
PTPN7-205ENST00000464870 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-205ENST00000464870 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
PTPN7-205ENST00000464870 MYH14Q7Z406 1995 aaKnown RBP15.79■□□□□ 0.12
PTPN7-205ENST00000464870 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
PTPN7-205ENST00000464870 FKBP8Q14318 412 aa15.79■□□□□ 0.12
PTPN7-205ENST00000464870 NBPF10Q6P3W6 841 aaKnown RBP15.79■□□□□ 0.12
PTPN7-205ENST00000464870 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
PTPN7-205ENST00000464870 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
PTPN7-205ENST00000464870 SMC4Q9NTJ3 1288 aa15.79■□□□□ 0.12
PTPN7-205ENST00000464870 PARP3Q9Y6F1 533 aa15.79■□□□□ 0.12
PTPN7-205ENST00000464870 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
PTPN7-205ENST00000464870 PLIN1O60240 522 aa15.78■□□□□ 0.12
PTPN7-205ENST00000464870 HOXB7P09629 217 aa15.78■□□□□ 0.12
PTPN7-205ENST00000464870 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
PTPN7-205ENST00000464870 MRPL50Q8N5N7 158 aaKnown RBP15.78■□□□□ 0.12
PTPN7-205ENST00000464870 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
PTPN7-205ENST00000464870 MYL6BP14649 208 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms