RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ZPR1O75312 459 aa25.67■■□□□ 1.7
CCHCR1-210ENST00000464012 CANXP27824 592 aaKnown RBP25.67■■□□□ 1.7
CCHCR1-210ENST00000464012 DDX10Q13206 875 aaKnown RBP25.67■■□□□ 1.7
CCHCR1-210ENST00000464012 USPL1Q5W0Q7 1092 aa25.67■■□□□ 1.7
CCHCR1-210ENST00000464012 BRCA1P38398 1863 aaKnown RBP25.66■■□□□ 1.7
CCHCR1-210ENST00000464012 AFDNP55196 1824 aaKnown RBP25.66■■□□□ 1.7
CCHCR1-210ENST00000464012 BTBD11A6QL63 1104 aa25.66■■□□□ 1.7
CCHCR1-210ENST00000464012 GOLGB1Q14789 3259 aaKnown RBP25.66■■□□□ 1.7
CCHCR1-210ENST00000464012 DCTN1Q14203 1278 aa25.65■■□□□ 1.7
CCHCR1-210ENST00000464012 KCNQ3O43525 872 aa25.64■■□□□ 1.7
CCHCR1-210ENST00000464012 STARD3NLO95772 234 aa25.64■■□□□ 1.7
CCHCR1-210ENST00000464012 NEFMP07197 916 aa25.64■■□□□ 1.7
CCHCR1-210ENST00000464012 FMNL2Q96PY5 1086 aa25.64■■□□□ 1.7
CCHCR1-210ENST00000464012 DDR1Q08345 913 aa25.63■■□□□ 1.69
CCHCR1-210ENST00000464012 SCN7AQ01118 1682 aa25.63■■□□□ 1.69
CCHCR1-210ENST00000464012 A0A0G2JLW4 131 aa25.62■■□□□ 1.69
CCHCR1-210ENST00000464012 ZNF330Q9Y3S2 320 aaPredicted RBP25.62■■□□□ 1.69
CCHCR1-210ENST00000464012 NARFQ9UHQ1 456 aa25.61■■□□□ 1.69
CCHCR1-210ENST00000464012 TGFB2P61812 414 aa25.6■■□□□ 1.69
CCHCR1-210ENST00000464012 TEX13AQ9BXU3 409 aaPredicted RBP25.6■■□□□ 1.69
CCHCR1-210ENST00000464012 POLRMTO00411 1230 aaKnown RBP25.59■■□□□ 1.69
CCHCR1-210ENST00000464012 RALBP1Q15311 655 aa25.59■■□□□ 1.69
CCHCR1-210ENST00000464012 DPEP1P16444 411 aa25.58■■□□□ 1.69
CCHCR1-210ENST00000464012 KDM3BQ7LBC6 1761 aa25.58■■□□□ 1.69
CCHCR1-210ENST00000464012 NRXN2Q9P2S2 1712 aa25.57■■□□□ 1.68
CCHCR1-210ENST00000464012 BCORQ6W2J9 1755 aa25.57■■□□□ 1.68
CCHCR1-210ENST00000464012 TM4SF1P30408 202 aa25.57■■□□□ 1.68
CCHCR1-210ENST00000464012 BCS1LQ9Y276 419 aa25.57■■□□□ 1.68
CCHCR1-210ENST00000464012 ARFGEF1Q9Y6D6 1849 aa25.57■■□□□ 1.68
CCHCR1-210ENST00000464012 LAMB4A4D0S4 1761 aa25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 HTATSF1O43719 755 aaKnown RBP25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 EIF5P55010 431 aaKnown RBP25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 PLEKHF1Q96S99 279 aa25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 BCL2L12Q9HB09 334 aa25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 MAPK8IP3Q9UPT6 1336 aa25.56■■□□□ 1.68
CCHCR1-210ENST00000464012 PRAMEF22A3QJZ6 481 aa25.55■■□□□ 1.68
CCHCR1-210ENST00000464012 A1BGP04217 495 aa25.55■■□□□ 1.68
CCHCR1-210ENST00000464012 NFIXQ14938 502 aa25.55■■□□□ 1.68
CCHCR1-210ENST00000464012 A0A087WZG4 1122 aa25.54■■□□□ 1.68
CCHCR1-210ENST00000464012 PIP4K2AP48426 406 aaPredicted RBP25.53■■□□□ 1.68
CCHCR1-210ENST00000464012 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
CCHCR1-210ENST00000464012 BICDL1Q6ZP65 573 aa25.53■■□□□ 1.68
CCHCR1-210ENST00000464012 USP16Q9Y5T5 823 aa25.53■■□□□ 1.68
CCHCR1-210ENST00000464012 MYBBP1AQ9BQG0 1328 aaKnown RBP25.53■■□□□ 1.68
CCHCR1-210ENST00000464012 NPM2Q86SE8 214 aaKnown RBP25.52■■□□□ 1.68
CCHCR1-210ENST00000464012 PNNQ9H307 717 aaKnown RBP25.52■■□□□ 1.68
CCHCR1-210ENST00000464012 MIS18AQ9NYP9 233 aa25.52■■□□□ 1.68
CCHCR1-210ENST00000464012 TBC1D2BQ9UPU7 963 aa25.52■■□□□ 1.68
CCHCR1-210ENST00000464012 ATP10DQ9P241 1426 aa25.52■■□□□ 1.68
CCHCR1-210ENST00000464012 DLEC1Q9Y238 1755 aa25.51■■□□□ 1.67
CCHCR1-210ENST00000464012 IL6STP40189 918 aaPredicted RBP25.51■■□□□ 1.67
CCHCR1-210ENST00000464012 TAF7Q15545 349 aaPredicted RBP25.51■■□□□ 1.67
CCHCR1-210ENST00000464012 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
CCHCR1-210ENST00000464012 SNRPA1P09661 255 aaKnown RBP25.5■■□□□ 1.67
CCHCR1-210ENST00000464012 CHRNA5P30532 468 aa25.5■■□□□ 1.67
CCHCR1-210ENST00000464012 SERPINB2P05120 415 aa25.49■■□□□ 1.67
CCHCR1-210ENST00000464012 KCNA3P22001 575 aa25.49■■□□□ 1.67
CCHCR1-210ENST00000464012 ANKRD31Q8N7Z5 1873 aa25.49■■□□□ 1.67
CCHCR1-210ENST00000464012 TBC1D9BQ66K14 1250 aa25.48■■□□□ 1.67
CCHCR1-210ENST00000464012 PIM2Q9P1W9 311 aa25.48■■□□□ 1.67
CCHCR1-210ENST00000464012 ADCY9O60503 1353 aa25.47■■□□□ 1.67
CCHCR1-210ENST00000464012 CARMIL3Q8ND23 1372 aa25.46■■□□□ 1.67
CCHCR1-210ENST00000464012 ARHGAP27Q6ZUM4 889 aa25.46■■□□□ 1.67
CCHCR1-210ENST00000464012 DZIP3Q86Y13 1208 aaKnown RBP25.46■■□□□ 1.67
CCHCR1-210ENST00000464012 ZNF526Q8TF50 670 aaPredicted RBP25.46■■□□□ 1.67
CCHCR1-210ENST00000464012 GIGYF1O75420 1035 aaPredicted RBP25.45■■□□□ 1.66
CCHCR1-210ENST00000464012 CAMTA2O94983 1202 aa25.44■■□□□ 1.66
CCHCR1-210ENST00000464012 DALRD3Q5D0E6 543 aaKnown RBP25.44■■□□□ 1.66
CCHCR1-210ENST00000464012 PNISRQ8TF01 805 aaKnown RBP25.44■■□□□ 1.66
CCHCR1-210ENST00000464012 CACNA1SQ13698 1873 aa25.44■■□□□ 1.66
CCHCR1-210ENST00000464012 COL11A2P13942 1736 aaPredicted RBP25.43■■□□□ 1.66
CCHCR1-210ENST00000464012 CCDC146Q8IYE0 955 aa25.42■■□□□ 1.66
CCHCR1-210ENST00000464012 RIPK4P57078 832 aa25.41■■□□□ 1.66
CCHCR1-210ENST00000464012 NBPF26B4DH59 902 aa25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 WDR43Q15061 677 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 NBPF10Q6P3W6 841 aaKnown RBP25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 CCDC24Q8N4L8 307 aa25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 NBPF15Q8N660 670 aa25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 GPBP1L1Q9HC44 474 aaPredicted RBP25.4■■□□□ 1.66
CCHCR1-210ENST00000464012 SBF1O95248 1867 aa25.39■■□□□ 1.66
CCHCR1-210ENST00000464012 NPHP1O15259 732 aa25.39■■□□□ 1.66
CCHCR1-210ENST00000464012 C1QTNF8P60827 252 aa25.39■■□□□ 1.66
CCHCR1-210ENST00000464012 C2CD5Q86YS7 1000 aa25.39■■□□□ 1.66
CCHCR1-210ENST00000464012 RRP7AQ9Y3A4 280 aaKnown RBP25.39■■□□□ 1.66
CCHCR1-210ENST00000464012 TMPOP42166 694 aaKnown RBP25.38■■□□□ 1.65
CCHCR1-210ENST00000464012 EIF4A1P60842 406 aaKnown RBP25.38■■□□□ 1.65
CCHCR1-210ENST00000464012 SETDB2Q96T68 719 aa25.38■■□□□ 1.65
CCHCR1-210ENST00000464012 PRKRIP1Q9H875 184 aaPredicted RBP25.38■■□□□ 1.65
CCHCR1-210ENST00000464012 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
CCHCR1-210ENST00000464012 PRR5LQ6MZQ0 368 aa25.37■■□□□ 1.65
CCHCR1-210ENST00000464012 TSPYL4Q9UJ04 414 aa25.37■■□□□ 1.65
CCHCR1-210ENST00000464012 NUP98P52948 1817 aa25.37■■□□□ 1.65
CCHCR1-210ENST00000464012 CCDC88AQ3V6T2 1871 aa25.36■■□□□ 1.65
CCHCR1-210ENST00000464012 LMOD3Q0VAK6 560 aa25.35■■□□□ 1.65
CCHCR1-210ENST00000464012 NGEFQ8N5V2 710 aa25.35■■□□□ 1.65
CCHCR1-210ENST00000464012 CNBD1Q8NA66 436 aa25.35■■□□□ 1.65
CCHCR1-210ENST00000464012 ZNF652Q9Y2D9 606 aa25.35■■□□□ 1.65
CCHCR1-210ENST00000464012 H0YIN7 160 aa25.34■■□□□ 1.65
CCHCR1-210ENST00000464012 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
CCHCR1-210ENST00000464012 ST5P78524 1137 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms