RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 MEGF6O75095 1541 aa10.58□□□□□ -0.72
RPA3-205ENST00000462723 EXOSC9Q06265 439 aaKnown RBP10.57□□□□□ -0.72
RPA3-205ENST00000462723 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
RPA3-205ENST00000462723 RNF25Q96BH1 459 aaPredicted RBP10.57□□□□□ -0.72
RPA3-205ENST00000462723 PKD1L3Q7Z443 1732 aa10.57□□□□□ -0.72
RPA3-205ENST00000462723 NWD2Q9ULI1 1742 aa10.57□□□□□ -0.72
RPA3-205ENST00000462723 SPATA31A6Q5VVP1 1343 aa10.57□□□□□ -0.72
RPA3-205ENST00000462723 CHL1O00533 1208 aa10.56□□□□□ -0.72
RPA3-205ENST00000462723 RRP1P56182 461 aaKnown RBP10.56□□□□□ -0.72
RPA3-205ENST00000462723 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.56□□□□□ -0.72
RPA3-205ENST00000462723 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
RPA3-205ENST00000462723 MBIPQ9NS73 344 aa10.56□□□□□ -0.72
RPA3-205ENST00000462723 OVOS2A0A0G2JMS6 1433 aa10.56□□□□□ -0.72
RPA3-205ENST00000462723 VIRMAQ69YN4 1812 aaKnown RBP10.56□□□□□ -0.72
RPA3-205ENST00000462723 IL2RBP14784 551 aa10.55□□□□□ -0.72
RPA3-205ENST00000462723 HSPA1LP34931 641 aa10.55□□□□□ -0.72
RPA3-205ENST00000462723 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
RPA3-205ENST00000462723 BABAM1Q9NWV8 329 aa10.55□□□□□ -0.72
RPA3-205ENST00000462723 NRAPQ86VF7 1730 aa10.55□□□□□ -0.72
RPA3-205ENST00000462723 CEMIPQ8WUJ3 1361 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 HSP90AB1P08238 724 aaKnown RBP10.54□□□□□ -0.72
RPA3-205ENST00000462723 TEFQ10587 303 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 TAF7Q15545 349 aaPredicted RBP10.54□□□□□ -0.72
RPA3-205ENST00000462723 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 MPRIPQ6WCQ1 1025 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 ZCRB1Q8TBF4 217 aaKnown RBP10.54□□□□□ -0.72
RPA3-205ENST00000462723 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 TSPYL4Q9UJ04 414 aa10.54□□□□□ -0.72
RPA3-205ENST00000462723 PHKG2P15735 406 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 PBX2P40425 430 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 RARSP54136 660 aaKnown RBP10.53□□□□□ -0.72
RPA3-205ENST00000462723 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
RPA3-205ENST00000462723 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 ADAMTS7Q9UKP4 1686 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 PCDH11XQ9BZA7 1347 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 PCDH11YQ9BZA8 1340 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 SLIT2O94813 1529 aa10.53□□□□□ -0.72
RPA3-205ENST00000462723 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.72
RPA3-205ENST00000462723 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
RPA3-205ENST00000462723 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
RPA3-205ENST00000462723 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
RPA3-205ENST00000462723 NGLY1Q96IV0 654 aa10.52□□□□□ -0.73
RPA3-205ENST00000462723 C8orf37Q96NL8 207 aa10.52□□□□□ -0.73
RPA3-205ENST00000462723 CDCA7Q9BWT1 371 aaPredicted RBP10.52□□□□□ -0.73
RPA3-205ENST00000462723 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
RPA3-205ENST00000462723 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 BCAR3O75815 825 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 TWISTNBQ3B726 338 aaPredicted RBP10.51□□□□□ -0.73
RPA3-205ENST00000462723 ALDH1L2Q3SY69 923 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 MEX3CQ5U5Q3 659 aaKnown RBP10.51□□□□□ -0.73
RPA3-205ENST00000462723 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 SMC4Q9NTJ3 1288 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
RPA3-205ENST00000462723 THRAP3Q9Y2W1 955 aaKnown RBP10.51□□□□□ -0.73
RPA3-205ENST00000462723 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
RPA3-205ENST00000462723 CYP27B1O15528 508 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 PLIN1O60240 522 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 VAMP4O75379 141 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 UNC5CLQ8IV45 518 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 C8orf58Q8NAV2 365 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 CCDC9Q9Y3X0 531 aaKnown RBP10.5□□□□□ -0.73
RPA3-205ENST00000462723 SOS1Q07889 1333 aaPredicted RBP10.5□□□□□ -0.73
RPA3-205ENST00000462723 SPATA31A1Q5TZJ5 1347 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 SPATA31A5Q5VU36 1347 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 SPATA31A7Q8IWB4 1347 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 LRP6O75581 1613 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 SHANK3Q9BYB0 1731 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 DISP2A7MBM2 1401 aa10.5□□□□□ -0.73
RPA3-205ENST00000462723 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
RPA3-205ENST00000462723 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
RPA3-205ENST00000462723 BTBD11A6QL63 1104 aa10.49□□□□□ -0.73
RPA3-205ENST00000462723 ELL2O00472 640 aaPredicted RBP10.49□□□□□ -0.73
RPA3-205ENST00000462723 FNBP4Q8N3X1 1017 aaPredicted RBP10.49□□□□□ -0.73
RPA3-205ENST00000462723 TSPYL6Q8N831 410 aa10.49□□□□□ -0.73
RPA3-205ENST00000462723 SSH1Q8WYL5 1049 aa10.49□□□□□ -0.73
RPA3-205ENST00000462723 FRAT1Q92837 279 aaPredicted RBP10.49□□□□□ -0.73
RPA3-205ENST00000462723 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
RPA3-205ENST00000462723 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
RPA3-205ENST00000462723 MS4A1P11836 297 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 VPS72Q15906 364 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
RPA3-205ENST00000462723 DDX54Q8TDD1 881 aaKnown RBP10.48□□□□□ -0.73
RPA3-205ENST00000462723 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 CHMP4AQ9BY43 222 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 SLC52A2Q9HAB3 445 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 KIF16BQ96L93 1317 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 MRC1P22897 1456 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
RPA3-205ENST00000462723 ERVV-2B6SEH9 535 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 EXOC5O00471 708 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 IPO8O15397 1037 aaKnown RBP10.47□□□□□ -0.73
RPA3-205ENST00000462723 CABP4P57796 275 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 PDE3AQ14432 1141 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
RPA3-205ENST00000462723 ZKSCAN2Q63HK3 967 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 USP21Q9UK80 565 aa10.47□□□□□ -0.73
RPA3-205ENST00000462723 BRPF1P55201 1214 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms