RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 GDF10P55107 478 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 POTEGQ6S5H5 508 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 OSBPL2Q9H1P3 480 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 PCDHB11Q9Y5F2 797 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 ZBTB39O15060 712 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 ATP2B1P20020 1258 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 MZF1P28698 734 aaPredicted RBP4.51□□□□□ -1.69
SMC4-203ENST00000462668 BAP1Q92560 729 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 FAM161BQ96MY7 647 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 ETNK1Q9HBU6 452 aa4.51□□□□□ -1.69
SMC4-203ENST00000462668 BACH1O14867 736 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 LILRA1O75019 489 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 PDGFAP04085 211 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 MAP3K10Q02779 954 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 ABTB2Q8N961 1025 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 MKNK1Q9BUB5 465 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 PPM1GO15355 546 aaPredicted RBP4.5□□□□□ -1.69
SMC4-203ENST00000462668 XRCC5P13010 732 aaKnown RBP4.5□□□□□ -1.69
SMC4-203ENST00000462668 NAA30Q147X3 362 aaPredicted RBP4.5□□□□□ -1.69
SMC4-203ENST00000462668 TEAD4Q15561 434 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 TNNI2P48788 182 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 CC2D2BQ6DHV5 1058 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 ADGRD1Q6QNK2 874 aa4.5□□□□□ -1.69
SMC4-203ENST00000462668 TSPAN10Q9H1Z9 355 aaPredicted RBP4.5□□□□□ -1.69
SMC4-203ENST00000462668 SH3BP2P78314 561 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 LRP10Q7Z4F1 713 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 CCSER2Q9H7U1 834 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 GNRH1P01148 92 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 ATF4P18848 351 aaPredicted RBP4.49□□□□□ -1.69
SMC4-203ENST00000462668 PPP1R18Q6NYC8 613 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 SCG3Q8WXD2 468 aaKnown RBP4.49□□□□□ -1.69
SMC4-203ENST00000462668 ERVH48-1M5A8F1 160 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 INTS6LQ5JSJ4 861 aaKnown RBP4.49□□□□□ -1.69
SMC4-203ENST00000462668 TNS4Q8IZW8 715 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 DNAJC2Q99543 621 aaKnown RBP4.49□□□□□ -1.69
SMC4-203ENST00000462668 HINFPQ9BQA5 517 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 SCUBE2Q9NQ36 999 aa4.49□□□□□ -1.69
SMC4-203ENST00000462668 SMTNP53814 917 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 XPCQ01831 940 aaPredicted RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 ZDHHC1Q8WTX9 485 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 FHDC1Q9C0D6 1143 aaPredicted RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 EML1O00423 815 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 USP5P45974 858 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 PLEKHG4Q58EX7 1191 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 ETFBKMTQ8IXQ9 262 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 RPUSD2Q8IZ73 545 aaKnown RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 ARID5AQ03989 594 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 PSMD2Q13200 908 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 VARS2Q5ST30 1063 aaKnown RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 JMYQ8N9B5 988 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 CAPN10Q9HC96 672 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 ZPR1O75312 459 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 PPP4CP60510 307 aa4.48□□□□□ -1.69
SMC4-203ENST00000462668 MRPL50Q8N5N7 158 aaKnown RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 METTL14Q9HCE5 456 aaKnown RBP4.48□□□□□ -1.69
SMC4-203ENST00000462668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.48□□□□□ -1.695e-8■■■■■ 43.3
SMC4-203ENST00000462668 ZBTB24O43167 697 aaPredicted RBP4.47□□□□□ -1.69
SMC4-203ENST00000462668 KLF4O43474 513 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 C1orf53Q5VUE5 145 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 C12orf49Q9H741 205 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 DMGDHQ9UI17 866 aaKnown RBP4.47□□□□□ -1.69
SMC4-203ENST00000462668 POLIQ9UNA4 740 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 HPS5Q9UPZ3 1129 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 AXIN2Q9Y2T1 843 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 PNMA6FA0A0J9YX94 578 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 ZNF394Q53GI3 561 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 NYAP1Q6ZVC0 841 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 KCTD15Q96SI1 283 aaPredicted RBP4.47□□□□□ -1.69
SMC4-203ENST00000462668 CWC22Q9HCG8 908 aaKnown RBP4.47□□□□□ -1.69
SMC4-203ENST00000462668 RBM19Q9Y4C8 960 aaKnown RBP4.47□□□□□ -1.69
SMC4-203ENST00000462668 GRM5P41594 1212 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 SLC10A4Q96EP9 437 aa4.47□□□□□ -1.69
SMC4-203ENST00000462668 TJAP1Q5JTD0 557 aa4.46□□□□□ -1.69
SMC4-203ENST00000462668 KDF1Q8NAX2 398 aaPredicted RBP4.46□□□□□ -1.69
SMC4-203ENST00000462668 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.69
SMC4-203ENST00000462668 SUGT1Q9Y2Z0 365 aa4.46□□□□□ -1.69
SMC4-203ENST00000462668 A6NJY4 79 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 MYCP01106 439 aaPredicted RBP4.46□□□□□ -1.7
SMC4-203ENST00000462668 VARSP26640 1264 aaKnown RBP4.46□□□□□ -1.7
SMC4-203ENST00000462668 SOX9P48436 509 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 BCS1LQ9Y276 419 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 IL2RAP01589 272 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 RTN1Q16799 776 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 SLC9A9Q8IVB4 645 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 VTI1BQ9UEU0 232 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 USP3Q9Y6I4 520 aa4.46□□□□□ -1.7
SMC4-203ENST00000462668 PSMA6P60900 246 aaKnown RBP4.45□□□□□ -1.7
SMC4-203ENST00000462668 PTPROQ16827 1216 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 C11orf91Q3C1V1 193 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 CCDC181Q5TID7 509 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 OSBPL7Q9BZF2 842 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 LGR5O75473 907 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 BRD2P25440 801 aaKnown RBP4.45□□□□□ -1.7
SMC4-203ENST00000462668 VEGFBP49765 207 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 BCAMP50895 628 aa4.45□□□□□ -1.7
SMC4-203ENST00000462668 LSM11P83369 360 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMC4-203ENST00000462668 GNL2Q13823 731 aaKnown RBP4.45□□□□□ -1.7
SMC4-203ENST00000462668 MRS2Q9HD23 443 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 570.4 ms