RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 C5P01031 1676 aa10.68□□□□□ -0.7
SSR1-203ENST00000462112 ZNF831Q5JPB2 1677 aa10.68□□□□□ -0.7
SSR1-203ENST00000462112 ADAMTS7Q9UKP4 1686 aa10.68□□□□□ -0.7
SSR1-203ENST00000462112 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
SSR1-203ENST00000462112 A0A087WZG4 1122 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 APAF1O14727 1248 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 RPS6KA4O75676 772 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 RFC4P35249 363 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 DCTN1Q14203 1278 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 CCDC87Q9NVE4 849 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 TSPYL4Q9UJ04 414 aa10.67□□□□□ -0.7
SSR1-203ENST00000462112 HEG1Q9ULI3 1381 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.66□□□□□ -0.7
SSR1-203ENST00000462112 ZPR1O75312 459 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 PHF14O94880 888 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 CRKLP46109 303 aaKnown RBP10.66□□□□□ -0.7
SSR1-203ENST00000462112 GNAI1P63096 354 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 LINC00116Q8NCU8 138 aa10.66□□□□□ -0.7
SSR1-203ENST00000462112 RRP7AQ9Y3A4 280 aaKnown RBP10.66□□□□□ -0.7
SSR1-203ENST00000462112 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
SSR1-203ENST00000462112 C4BP0C0L5 1744 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 ZBTB7AO95365 584 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 ITPK1Q13572 414 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 DNAJC10Q8IXB1 793 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 NLGN1Q8N2Q7 840 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 ZNF496Q96IT1 587 aaPredicted RBP10.65□□□□□ -0.7
SSR1-203ENST00000462112 PAPPAQ13219 1627 aa10.65□□□□□ -0.7
SSR1-203ENST00000462112 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.71
SSR1-203ENST00000462112 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
SSR1-203ENST00000462112 QSER1Q2KHR3 1735 aa10.64□□□□□ -0.71
SSR1-203ENST00000462112 PNPLA7Q6ZV29 1317 aa10.64□□□□□ -0.71
SSR1-203ENST00000462112 CCDC27Q2M243 656 aa10.64□□□□□ -0.71
SSR1-203ENST00000462112 CYP19A1P11511 503 aaPredicted RBP10.63□□□□□ -0.71
SSR1-203ENST00000462112 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
SSR1-203ENST00000462112 COL23A1Q86Y22 540 aaPredicted RBP10.63□□□□□ -0.71
SSR1-203ENST00000462112 CFAP44Q96MT7 982 aa10.63□□□□□ -0.71
SSR1-203ENST00000462112 ARXQ96QS3 562 aa10.63□□□□□ -0.71
SSR1-203ENST00000462112 IL6STP40189 918 aaPredicted RBP10.62□□□□□ -0.71
SSR1-203ENST00000462112 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
SSR1-203ENST00000462112 IFT57Q9NWB7 429 aa10.62□□□□□ -0.71
SSR1-203ENST00000462112 ZNF330Q9Y3S2 320 aaPredicted RBP10.62□□□□□ -0.71
SSR1-203ENST00000462112 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
SSR1-203ENST00000462112 LRP5O75197 1615 aa10.62□□□□□ -0.71
SSR1-203ENST00000462112 CHL1O00533 1208 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
SSR1-203ENST00000462112 CCDC184Q52MB2 194 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
SSR1-203ENST00000462112 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
SSR1-203ENST00000462112 MIS18AQ9NYP9 233 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 KCPQ6ZWJ8 1503 aa10.61□□□□□ -0.71
SSR1-203ENST00000462112 CICQ96RK0 1608 aaPredicted RBP10.61□□□□□ -0.71
SSR1-203ENST00000462112 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
SSR1-203ENST00000462112 IL16Q14005 1332 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 ERBB4Q15303 1308 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 GIGYF1O75420 1035 aaPredicted RBP10.6□□□□□ -0.71
SSR1-203ENST00000462112 HOXB7P09629 217 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 INTS5Q6P9B9 1019 aaKnown RBP10.6□□□□□ -0.71
SSR1-203ENST00000462112 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
SSR1-203ENST00000462112 COL5A3P25940 1745 aaPredicted RBP10.59□□□□□ -0.71
SSR1-203ENST00000462112 NPHP1O15259 732 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 KCNQ3O43525 872 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 MYH16Q9H6N6 1097 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 NARFQ9UHQ1 456 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 COL15A1P39059 1388 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 CASZ1Q86V15 1759 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 UBR3Q6ZT12 1888 aa10.59□□□□□ -0.71
SSR1-203ENST00000462112 A1BGP04217 495 aa10.58□□□□□ -0.72
SSR1-203ENST00000462112 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
SSR1-203ENST00000462112 KIF6Q6ZMV9 814 aa10.58□□□□□ -0.72
SSR1-203ENST00000462112 KLHL34Q8N239 644 aa10.58□□□□□ -0.72
SSR1-203ENST00000462112 USP16Q9Y5T5 823 aa10.58□□□□□ -0.72
SSR1-203ENST00000462112 TJP1Q07157 1748 aa10.58□□□□□ -0.72
SSR1-203ENST00000462112 USP42Q9H9J4 1324 aaKnown RBP10.58□□□□□ -0.72
SSR1-203ENST00000462112 RGL2O15211 777 aa10.57□□□□□ -0.72
SSR1-203ENST00000462112 EIF2S2P20042 333 aaKnown RBP10.57□□□□□ -0.72
SSR1-203ENST00000462112 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
SSR1-203ENST00000462112 MSL1Q68DK7 614 aa10.57□□□□□ -0.72
SSR1-203ENST00000462112 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
SSR1-203ENST00000462112 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
SSR1-203ENST00000462112 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
SSR1-203ENST00000462112 KDM3BQ7LBC6 1761 aa10.57□□□□□ -0.72
SSR1-203ENST00000462112 GYS1P13807 737 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 PTGER2P43116 358 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 STK31Q9BXU1 1019 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 MBIPQ9NS73 344 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 DBF4Q9UBU7 674 aaPredicted RBP10.56□□□□□ -0.72
SSR1-203ENST00000462112 CD2APQ9Y5K6 639 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
SSR1-203ENST00000462112 MMP10P09238 476 aa10.55□□□□□ -0.72
SSR1-203ENST00000462112 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
SSR1-203ENST00000462112 CCDC30Q5VVM6 783 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms