RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
COL4A6-204ENST00000461897 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 WNK3Q9BYP7 1800 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 DISP2A7MBM2 1401 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 PXDNLA1KZ92 1463 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 TOGARAM1Q9Y4F4 1720 aa15.45■□□□□ 0.06
COL4A6-204ENST00000461897 FSD2A1L4K1 749 aa15.44■□□□□ 0.06
COL4A6-204ENST00000461897 HSCBQ8IWL3 235 aa15.44■□□□□ 0.06
COL4A6-204ENST00000461897 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
COL4A6-204ENST00000461897 ATP10DQ9P241 1426 aa15.44■□□□□ 0.06
COL4A6-204ENST00000461897 NKX1-1Q15270 411 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-204ENST00000461897 SLC4A10Q6U841 1118 aa15.43■□□□□ 0.06
COL4A6-204ENST00000461897 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-204ENST00000461897 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 CCT4P50991 539 aaKnown RBP15.42■□□□□ 0.06
COL4A6-204ENST00000461897 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 MEIS3Q99687 375 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 ADAMTS2O95450 1211 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 CABP4P57796 275 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 UBR2Q8IWV8 1755 aa15.42■□□□□ 0.06
COL4A6-204ENST00000461897 ANXA1P04083 346 aa15.41■□□□□ 0.06
COL4A6-204ENST00000461897 ZNF496Q96IT1 587 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-204ENST00000461897 LNPKQ9C0E8 428 aa15.41■□□□□ 0.06
COL4A6-204ENST00000461897 DBF4Q9UBU7 674 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-204ENST00000461897 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
COL4A6-204ENST00000461897 DDX54Q8TDD1 881 aaKnown RBP15.4■□□□□ 0.06
COL4A6-204ENST00000461897 LAMB4A4D0S4 1761 aa15.4■□□□□ 0.06
COL4A6-204ENST00000461897 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
COL4A6-204ENST00000461897 NWD2Q9ULI1 1742 aa15.39■□□□□ 0.06
COL4A6-204ENST00000461897 ERVV-2B6SEH9 535 aa15.39■□□□□ 0.05
COL4A6-204ENST00000461897 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
COL4A6-204ENST00000461897 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
COL4A6-204ENST00000461897 TTC5Q8N0Z6 440 aa15.38■□□□□ 0.05
COL4A6-204ENST00000461897 KIF2CQ99661 725 aa15.38■□□□□ 0.05
COL4A6-204ENST00000461897 ADCY9O60503 1353 aa15.38■□□□□ 0.05
COL4A6-204ENST00000461897 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
COL4A6-204ENST00000461897 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-204ENST00000461897 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-204ENST00000461897 PDIA6Q15084 440 aa15.37■□□□□ 0.05
COL4A6-204ENST00000461897 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-204ENST00000461897 SLIT2O94813 1529 aa15.37■□□□□ 0.05
COL4A6-204ENST00000461897 CEP85Q6P2H3 762 aa15.37■□□□□ 0.05
COL4A6-204ENST00000461897 ANKRD44Q8N8A2 993 aa15.37■□□□□ 0.05
COL4A6-204ENST00000461897 FMNL2Q96PY5 1086 aa15.37■□□□□ 0.05
COL4A6-204ENST00000461897 ANO8Q9HCE9 1232 aaPredicted RBP15.37■□□□□ 0.05
COL4A6-204ENST00000461897 TNS2Q63HR2 1409 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 PI4KAP2A4QPH2 592 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 GOLGA6L3A6NEY3 463 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 TRAK2O60296 914 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 ANKRD45Q5TZF3 282 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 PI4KAP1Q8N8J0 262 aa15.36■□□□□ 0.05
COL4A6-204ENST00000461897 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL4A6-204ENST00000461897 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
COL4A6-204ENST00000461897 ITGB4P16144 1822 aa15.35■□□□□ 0.05
COL4A6-204ENST00000461897 SPATA31A1Q5TZJ5 1347 aa15.35■□□□□ 0.05
COL4A6-204ENST00000461897 LRP6O75581 1613 aa15.35■□□□□ 0.05
COL4A6-204ENST00000461897 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
COL4A6-204ENST00000461897 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
COL4A6-204ENST00000461897 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
COL4A6-204ENST00000461897 XRCC6P12956 609 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL4A6-204ENST00000461897 PTMSP20962 102 aa15.34■□□□□ 0.05
COL4A6-204ENST00000461897 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
COL4A6-204ENST00000461897 TBC1D9Q6ZT07 1266 aa15.34■□□□□ 0.05
COL4A6-204ENST00000461897 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
COL4A6-204ENST00000461897 USP16Q9Y5T5 823 aa15.34■□□□□ 0.05
COL4A6-204ENST00000461897 JCADQ9P266 1359 aa15.33■□□□□ 0.05
COL4A6-204ENST00000461897 BEND3Q5T5X7 828 aa15.33■□□□□ 0.05
COL4A6-204ENST00000461897 USP44Q9H0E7 712 aa15.33■□□□□ 0.05
COL4A6-204ENST00000461897 DCTPP1Q9H773 170 aa15.33■□□□□ 0.05
COL4A6-204ENST00000461897 GNAI3P08754 354 aa15.33■□□□□ 0.04
COL4A6-204ENST00000461897 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
COL4A6-204ENST00000461897 LRP10Q7Z4F1 713 aa15.33■□□□□ 0.04
COL4A6-204ENST00000461897 SRCIN1Q9C0H9 1055 aa15.33■□□□□ 0.04
COL4A6-204ENST00000461897 CDC45O75419 566 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 GNAI2P04899 355 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
COL4A6-204ENST00000461897 MRE11P49959 708 aa15.31■□□□□ 0.04
COL4A6-204ENST00000461897 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
COL4A6-204ENST00000461897 MAP3K2Q9Y2U5 619 aa15.31■□□□□ 0.04
COL4A6-204ENST00000461897 THRAP3Q9Y2W1 955 aaKnown RBP15.31■□□□□ 0.04
COL4A6-204ENST00000461897 DOT1LQ8TEK3 1739 aa15.31■□□□□ 0.04
COL4A6-204ENST00000461897 MYL6BP14649 208 aa15.31■□□□□ 0.04
COL4A6-204ENST00000461897 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
COL4A6-204ENST00000461897 EXOC5O00471 708 aa15.3■□□□□ 0.04
COL4A6-204ENST00000461897 PIP4K2AP48426 406 aaPredicted RBP15.3■□□□□ 0.04
COL4A6-204ENST00000461897 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
COL4A6-204ENST00000461897 TNPO1Q92973 898 aaKnown RBP15.3■□□□□ 0.04
COL4A6-204ENST00000461897 GBP4Q96PP9 640 aa15.3■□□□□ 0.04
COL4A6-204ENST00000461897 CDCA7Q9BWT1 371 aaPredicted RBP15.3■□□□□ 0.04
COL4A6-204ENST00000461897 AIMP1Q12904 312 aaKnown RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 PIGBQ92521 554 aa15.29■□□□□ 0.04
COL4A6-204ENST00000461897 LRRFIP2Q9Y608 721 aaKnown RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 BCL9O00512 1426 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms