RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
COL1A2-202ENST00000461525 FCHSD2O94868 740 aa23.63■■□□□ 1.37
COL1A2-202ENST00000461525 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
COL1A2-202ENST00000461525 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
COL1A2-202ENST00000461525 KIF13BQ9NQT8 1826 aa23.63■■□□□ 1.37
COL1A2-202ENST00000461525 ADCY9O60503 1353 aa23.63■■□□□ 1.37
COL1A2-202ENST00000461525 HEG1Q9ULI3 1381 aa23.63■■□□□ 1.37
COL1A2-202ENST00000461525 POLRMTO00411 1230 aaKnown RBP23.62■■□□□ 1.37
COL1A2-202ENST00000461525 TM4SF1P30408 202 aa23.62■■□□□ 1.37
COL1A2-202ENST00000461525 RTF1Q92541 710 aaKnown RBP23.61■■□□□ 1.37
COL1A2-202ENST00000461525 FMNL2Q96PY5 1086 aa23.61■■□□□ 1.37
COL1A2-202ENST00000461525 TEX13AQ9BXU3 409 aaPredicted RBP23.61■■□□□ 1.37
COL1A2-202ENST00000461525 UBR2Q8IWV8 1755 aa23.6■■□□□ 1.37
COL1A2-202ENST00000461525 KIAA1551Q9HCM1 1747 aa23.59■■□□□ 1.37
COL1A2-202ENST00000461525 BTBD11A6QL63 1104 aa23.59■■□□□ 1.37
COL1A2-202ENST00000461525 NFIXQ14938 502 aa23.59■■□□□ 1.37
COL1A2-202ENST00000461525 GPBP1L1Q9HC44 474 aaPredicted RBP23.59■■□□□ 1.37
COL1A2-202ENST00000461525 A0A087WZG4 1122 aa23.58■■□□□ 1.37
COL1A2-202ENST00000461525 EIF5P55010 431 aaKnown RBP23.58■■□□□ 1.37
COL1A2-202ENST00000461525 PIM2Q9P1W9 311 aa23.58■■□□□ 1.37
COL1A2-202ENST00000461525 VIRMAQ69YN4 1812 aaKnown RBP23.58■■□□□ 1.37
COL1A2-202ENST00000461525 KCNA3P22001 575 aa23.57■■□□□ 1.36
COL1A2-202ENST00000461525 BCL2L12Q9HB09 334 aa23.57■■□□□ 1.36
COL1A2-202ENST00000461525 N4BP2Q86UW6 1770 aaPredicted RBP23.56■■□□□ 1.36
COL1A2-202ENST00000461525 ARHGAP27Q6ZUM4 889 aa23.56■■□□□ 1.36
COL1A2-202ENST00000461525 MCM10Q7L590 875 aa23.56■■□□□ 1.36
COL1A2-202ENST00000461525 ZNF526Q8TF50 670 aaPredicted RBP23.56■■□□□ 1.36
COL1A2-202ENST00000461525 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
COL1A2-202ENST00000461525 KCNQ3O43525 872 aa23.55■■□□□ 1.36
COL1A2-202ENST00000461525 CHRNA5P30532 468 aa23.55■■□□□ 1.36
COL1A2-202ENST00000461525 ZNF330Q9Y3S2 320 aaPredicted RBP23.55■■□□□ 1.36
COL1A2-202ENST00000461525 HTATSF1O43719 755 aaKnown RBP23.54■■□□□ 1.36
COL1A2-202ENST00000461525 NEFMP07197 916 aa23.54■■□□□ 1.36
COL1A2-202ENST00000461525 DALRD3Q5D0E6 543 aaKnown RBP23.54■■□□□ 1.36
COL1A2-202ENST00000461525 SERPINB2P05120 415 aa23.53■■□□□ 1.36
COL1A2-202ENST00000461525 IL6STP40189 918 aaPredicted RBP23.53■■□□□ 1.36
COL1A2-202ENST00000461525 NPM2Q86SE8 214 aaKnown RBP23.53■■□□□ 1.36
COL1A2-202ENST00000461525 SIPA1L3O60292 1781 aaPredicted RBP23.52■■□□□ 1.36
COL1A2-202ENST00000461525 A1BGP04217 495 aa23.52■■□□□ 1.36
COL1A2-202ENST00000461525 DCTN1Q14203 1278 aa23.52■■□□□ 1.36
COL1A2-202ENST00000461525 BICDL1Q6ZP65 573 aa23.51■■□□□ 1.35
COL1A2-202ENST00000461525 TBC1D2BQ9UPU7 963 aa23.5■■□□□ 1.35
COL1A2-202ENST00000461525 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
COL1A2-202ENST00000461525 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
COL1A2-202ENST00000461525 USP16Q9Y5T5 823 aa23.48■■□□□ 1.35
COL1A2-202ENST00000461525 TAF7Q15545 349 aaPredicted RBP23.46■■□□□ 1.35
COL1A2-202ENST00000461525 BRCA1P38398 1863 aaKnown RBP23.45■■□□□ 1.35
COL1A2-202ENST00000461525 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.34
COL1A2-202ENST00000461525 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
COL1A2-202ENST00000461525 CAMTA2O94983 1202 aa23.45■■□□□ 1.34
COL1A2-202ENST00000461525 C9orf131Q5VYM1 1079 aa23.45■■□□□ 1.34
COL1A2-202ENST00000461525 DZIP3Q86Y13 1208 aaKnown RBP23.45■■□□□ 1.34
COL1A2-202ENST00000461525 PIP4K2AP48426 406 aaPredicted RBP23.44■■□□□ 1.34
COL1A2-202ENST00000461525 RALBP1Q15311 655 aa23.44■■□□□ 1.34
COL1A2-202ENST00000461525 C2CD5Q86YS7 1000 aa23.44■■□□□ 1.34
COL1A2-202ENST00000461525 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
COL1A2-202ENST00000461525 PNNQ9H307 717 aaKnown RBP23.44■■□□□ 1.34
COL1A2-202ENST00000461525 NRXN2Q9P2S2 1712 aa23.44■■□□□ 1.34
COL1A2-202ENST00000461525 MAPK8IP3Q9UPT6 1336 aa23.43■■□□□ 1.34
COL1A2-202ENST00000461525 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
COL1A2-202ENST00000461525 SCN7AQ01118 1682 aa23.43■■□□□ 1.34
COL1A2-202ENST00000461525 H0YIN7 160 aa23.42■■□□□ 1.34
COL1A2-202ENST00000461525 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
COL1A2-202ENST00000461525 SETDB2Q96T68 719 aa23.42■■□□□ 1.34
COL1A2-202ENST00000461525 KIF3CO14782 793 aa23.41■■□□□ 1.34
COL1A2-202ENST00000461525 PRR5LQ6MZQ0 368 aa23.41■■□□□ 1.34
COL1A2-202ENST00000461525 TTLL6Q8N841 843 aa23.41■■□□□ 1.34
COL1A2-202ENST00000461525 MIS18AQ9NYP9 233 aa23.41■■□□□ 1.34
COL1A2-202ENST00000461525 RNF181Q9P0P0 153 aa23.41■■□□□ 1.34
COL1A2-202ENST00000461525 NPHP1O15259 732 aa23.4■■□□□ 1.34
COL1A2-202ENST00000461525 BRIP1Q9BX63 1249 aa23.4■■□□□ 1.34
COL1A2-202ENST00000461525 AFDNP55196 1824 aaKnown RBP23.4■■□□□ 1.34
COL1A2-202ENST00000461525 ARFGEF1Q9Y6D6 1849 aa23.4■■□□□ 1.34
COL1A2-202ENST00000461525 PDE6BP35913 854 aa23.39■■□□□ 1.33
COL1A2-202ENST00000461525 DDX10Q13206 875 aaKnown RBP23.39■■□□□ 1.33
COL1A2-202ENST00000461525 CNBD1Q8NA66 436 aa23.39■■□□□ 1.33
COL1A2-202ENST00000461525 PDZRN3Q9UPQ7 1066 aa23.39■■□□□ 1.33
COL1A2-202ENST00000461525 ZNF652Q9Y2D9 606 aa23.39■■□□□ 1.33
COL1A2-202ENST00000461525 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
COL1A2-202ENST00000461525 NBPF26B4DH59 902 aa23.37■■□□□ 1.33
COL1A2-202ENST00000461525 NBPF10Q6P3W6 841 aaKnown RBP23.37■■□□□ 1.33
COL1A2-202ENST00000461525 CLEC4GQ6UXB4 293 aa23.37■■□□□ 1.33
COL1A2-202ENST00000461525 NBPF15Q8N660 670 aa23.37■■□□□ 1.33
COL1A2-202ENST00000461525 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
COL1A2-202ENST00000461525 ST5P78524 1137 aa23.36■■□□□ 1.33
COL1A2-202ENST00000461525 RASSF7Q02833 373 aa23.36■■□□□ 1.33
COL1A2-202ENST00000461525 ZNF622Q969S3 477 aaKnown RBP eCLIP23.36■■□□□ 1.33
COL1A2-202ENST00000461525 NMRK2Q9NPI5 230 aa23.35■■□□□ 1.33
COL1A2-202ENST00000461525 MYBBP1AQ9BQG0 1328 aaKnown RBP23.33■■□□□ 1.33
COL1A2-202ENST00000461525 RGL2O15211 777 aa23.33■■□□□ 1.33
COL1A2-202ENST00000461525 HSPA6P17066 643 aa23.33■■□□□ 1.33
COL1A2-202ENST00000461525 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.33
COL1A2-202ENST00000461525 NBPF5PQ86XG9 351 aaPredicted RBP23.33■■□□□ 1.33
COL1A2-202ENST00000461525 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.32
COL1A2-202ENST00000461525 LMNB1P20700 586 aa23.32■■□□□ 1.32
COL1A2-202ENST00000461525 TOMM70O94826 608 aa23.31■■□□□ 1.32
COL1A2-202ENST00000461525 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL1A2-202ENST00000461525 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
COL1A2-202ENST00000461525 DLEC1Q9Y238 1755 aa23.31■■□□□ 1.32
COL1A2-202ENST00000461525 RIPK4P57078 832 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 270 ms