RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 COL15A1P39059 1388 aa31.4■■■□□ 2.62
LMBR1-214ENST00000461469 PXDNLA1KZ92 1463 aa31.4■■■□□ 2.62
LMBR1-214ENST00000461469 BTBD11A6QL63 1104 aa31.39■■■□□ 2.62
LMBR1-214ENST00000461469 DDR1Q08345 913 aa31.39■■■□□ 2.62
LMBR1-214ENST00000461469 USPL1Q5W0Q7 1092 aa31.38■■■□□ 2.61
LMBR1-214ENST00000461469 CANXP27824 592 aaKnown RBP31.37■■■□□ 2.61
LMBR1-214ENST00000461469 RTF1Q92541 710 aaKnown RBP31.36■■■□□ 2.61
LMBR1-214ENST00000461469 BCL2L12Q9HB09 334 aa31.36■■■□□ 2.61
LMBR1-214ENST00000461469 PRAMEF22A3QJZ6 481 aa31.35■■■□□ 2.61
LMBR1-214ENST00000461469 AFDNP55196 1824 aaKnown RBP31.34■■■□□ 2.61
LMBR1-214ENST00000461469 FMNL2Q96PY5 1086 aa31.34■■■□□ 2.61
LMBR1-214ENST00000461469 PARP3Q9Y6F1 533 aa31.34■■■□□ 2.61
LMBR1-214ENST00000461469 HTATSF1O43719 755 aaKnown RBP31.33■■■□□ 2.61
LMBR1-214ENST00000461469 TM4SF1P30408 202 aa31.33■■■□□ 2.61
LMBR1-214ENST00000461469 EIF5P55010 431 aaKnown RBP31.33■■■□□ 2.61
LMBR1-214ENST00000461469 ZNF784Q8NCA9 323 aaPredicted RBP31.33■■■□□ 2.61
LMBR1-214ENST00000461469 NARFQ9UHQ1 456 aa31.33■■■□□ 2.61
LMBR1-214ENST00000461469 BRCA1P38398 1863 aaKnown RBP31.33■■■□□ 2.61
LMBR1-214ENST00000461469 MYBBP1AQ9BQG0 1328 aaKnown RBP31.31■■■□□ 2.6
LMBR1-214ENST00000461469 POLRMTO00411 1230 aaKnown RBP31.31■■■□□ 2.6
LMBR1-214ENST00000461469 ZPR1O75312 459 aa31.31■■■□□ 2.6
LMBR1-214ENST00000461469 STARD3NLO95772 234 aa31.31■■■□□ 2.6
LMBR1-214ENST00000461469 A1BGP04217 495 aa31.31■■■□□ 2.6
LMBR1-214ENST00000461469 USP16Q9Y5T5 823 aa31.31■■■□□ 2.6
LMBR1-214ENST00000461469 KDM3BQ7LBC6 1761 aa31.3■■■□□ 2.6
LMBR1-214ENST00000461469 A0A0G2JLW4 131 aa31.3■■■□□ 2.6
LMBR1-214ENST00000461469 THUMPD2Q9BTF0 503 aaKnown RBP31.3■■■□□ 2.6
LMBR1-214ENST00000461469 MIS18AQ9NYP9 233 aa31.3■■■□□ 2.6
LMBR1-214ENST00000461469 SCN7AQ01118 1682 aa31.29■■■□□ 2.6
LMBR1-214ENST00000461469 GRIN3BO60391 1043 aa31.29■■■□□ 2.6
LMBR1-214ENST00000461469 NFE2L2Q16236 605 aa31.29■■■□□ 2.6
LMBR1-214ENST00000461469 NRXN2Q9P2S2 1712 aa31.29■■■□□ 2.6
LMBR1-214ENST00000461469 NFIXQ14938 502 aa31.28■■■□□ 2.6
LMBR1-214ENST00000461469 DPEP1P16444 411 aa31.27■■■□□ 2.6
LMBR1-214ENST00000461469 PIP4K2AP48426 406 aaPredicted RBP31.27■■■□□ 2.6
LMBR1-214ENST00000461469 TEX13AQ9BXU3 409 aaPredicted RBP31.27■■■□□ 2.6
LMBR1-214ENST00000461469 TGFB2P61812 414 aa31.26■■■□□ 2.59
LMBR1-214ENST00000461469 TAF7Q15545 349 aaPredicted RBP31.25■■■□□ 2.59
LMBR1-214ENST00000461469 KCNA3P22001 575 aa31.24■■■□□ 2.59
LMBR1-214ENST00000461469 BCORQ6W2J9 1755 aa31.23■■■□□ 2.59
LMBR1-214ENST00000461469 NEFMP07197 916 aa31.23■■■□□ 2.59
LMBR1-214ENST00000461469 TBC1D2BQ9UPU7 963 aa31.23■■■□□ 2.59
LMBR1-214ENST00000461469 ZNF330Q9Y3S2 320 aaPredicted RBP31.23■■■□□ 2.59
LMBR1-214ENST00000461469 IL6STP40189 918 aaPredicted RBP31.22■■■□□ 2.59
LMBR1-214ENST00000461469 PRKRIP1Q9H875 184 aaPredicted RBP31.22■■■□□ 2.59
LMBR1-214ENST00000461469 LAMB4A4D0S4 1761 aa31.22■■■□□ 2.59
LMBR1-214ENST00000461469 MAPK8IP3Q9UPT6 1336 aa31.22■■■□□ 2.59
LMBR1-214ENST00000461469 SNRPA1P09661 255 aaKnown RBP31.2■■■□□ 2.59
LMBR1-214ENST00000461469 A0A087WZG4 1122 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 NBPF26B4DH59 902 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 CHRNA5P30532 468 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 TBC1D9BQ66K14 1250 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 NBPF10Q6P3W6 841 aaKnown RBP31.18■■■□□ 2.58
LMBR1-214ENST00000461469 CCDC146Q8IYE0 955 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 NBPF15Q8N660 670 aa31.18■■■□□ 2.58
LMBR1-214ENST00000461469 CARMIL3Q8ND23 1372 aa31.17■■■□□ 2.58
LMBR1-214ENST00000461469 BICDL1Q6ZP65 573 aa31.17■■■□□ 2.58
LMBR1-214ENST00000461469 PNNQ9H307 717 aaKnown RBP31.17■■■□□ 2.58
LMBR1-214ENST00000461469 BCS1LQ9Y276 419 aa31.17■■■□□ 2.58
LMBR1-214ENST00000461469 ARFGEF1Q9Y6D6 1849 aa31.17■■■□□ 2.58
LMBR1-214ENST00000461469 CAMTA2O94983 1202 aa31.16■■■□□ 2.58
LMBR1-214ENST00000461469 SERPINB2P05120 415 aa31.16■■■□□ 2.58
LMBR1-214ENST00000461469 ANKRD31Q8N7Z5 1873 aa31.16■■■□□ 2.58
LMBR1-214ENST00000461469 TMPOP42166 694 aaKnown RBP31.15■■■□□ 2.58
LMBR1-214ENST00000461469 RRP7AQ9Y3A4 280 aaKnown RBP31.15■■■□□ 2.58
LMBR1-214ENST00000461469 RIPK4P57078 832 aa31.14■■■□□ 2.58
LMBR1-214ENST00000461469 ADCY9O60503 1353 aa31.14■■■□□ 2.58
LMBR1-214ENST00000461469 DLEC1Q9Y238 1755 aa31.13■■■□□ 2.57
LMBR1-214ENST00000461469 EIF4A1P60842 406 aaKnown RBP31.13■■■□□ 2.57
LMBR1-214ENST00000461469 ZEB1P37275 1124 aaPredicted RBP31.12■■■□□ 2.57
LMBR1-214ENST00000461469 DZIP3Q86Y13 1208 aaKnown RBP31.12■■■□□ 2.57
LMBR1-214ENST00000461469 ADAMTS8Q9UP79 889 aa31.12■■■□□ 2.57
LMBR1-214ENST00000461469 PNISRQ8TF01 805 aaKnown RBP31.11■■■□□ 2.57
LMBR1-214ENST00000461469 ATP10DQ9P241 1426 aa31.1■■■□□ 2.57
LMBR1-214ENST00000461469 GIGYF1O75420 1035 aaPredicted RBP31.1■■■□□ 2.57
LMBR1-214ENST00000461469 CCDC24Q8N4L8 307 aa31.09■■■□□ 2.57
LMBR1-214ENST00000461469 PIM2Q9P1W9 311 aa31.08■■■□□ 2.57
LMBR1-214ENST00000461469 COL11A2P13942 1736 aaPredicted RBP31.07■■■□□ 2.56
LMBR1-214ENST00000461469 WDR43Q15061 677 aaKnown RBP eCLIP31.06■■■□□ 2.56
LMBR1-214ENST00000461469 NEUROD2Q15784 382 aa31.06■■■□□ 2.56
LMBR1-214ENST00000461469 RUNDC1Q96C34 613 aa31.05■■■□□ 2.56
LMBR1-214ENST00000461469 TRIM35Q9UPQ4 493 aa31.05■■■□□ 2.56
LMBR1-214ENST00000461469 PRR5LQ6MZQ0 368 aa31.04■■■□□ 2.56
LMBR1-214ENST00000461469 CCDC184Q52MB2 194 aa31.03■■■□□ 2.56
LMBR1-214ENST00000461469 DALRD3Q5D0E6 543 aaKnown RBP31.03■■■□□ 2.56
LMBR1-214ENST00000461469 ARHGAP27Q6ZUM4 889 aa31.03■■■□□ 2.56
LMBR1-214ENST00000461469 TSPYL4Q9UJ04 414 aa31.03■■■□□ 2.56
LMBR1-214ENST00000461469 NPM2Q86SE8 214 aaKnown RBP31.02■■■□□ 2.56
LMBR1-214ENST00000461469 HLFQ16534 295 aa31.01■■■□□ 2.55
LMBR1-214ENST00000461469 C2CD5Q86YS7 1000 aa31■■■□□ 2.55
LMBR1-214ENST00000461469 NUP98P52948 1817 aa30.99■■■□□ 2.55
LMBR1-214ENST00000461469 NGEFQ8N5V2 710 aa30.99■■■□□ 2.55
LMBR1-214ENST00000461469 SETDB2Q96T68 719 aa30.99■■■□□ 2.55
LMBR1-214ENST00000461469 SBF1O95248 1867 aa30.99■■■□□ 2.55
LMBR1-214ENST00000461469 LMOD3Q0VAK6 560 aa30.98■■■□□ 2.55
LMBR1-214ENST00000461469 CLEC4GQ6UXB4 293 aa30.97■■■□□ 2.55
LMBR1-214ENST00000461469 ZNF526Q8TF50 670 aaPredicted RBP30.97■■■□□ 2.55
LMBR1-214ENST00000461469 TTLL7Q6ZT98 887 aa30.96■■■□□ 2.55
LMBR1-214ENST00000461469 ZNF316A6NFI3 1004 aaPredicted RBP30.95■■■□□ 2.55
LMBR1-214ENST00000461469 MYL6BP14649 208 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms