RNA–Protein interactions for RNA: ENST00000458438.2

LYRM4-203, Transcript of LYR motif containing 4, humanhuman

TSL 2

Gene LYRM4, Length 941 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-203ENST00000458438 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
LYRM4-203ENST00000458438 COL15A1P39059 1388 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 STARD3NLO95772 234 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
LYRM4-203ENST00000458438 FKBP8Q14318 412 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
LYRM4-203ENST00000458438 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
LYRM4-203ENST00000458438 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 N4BP2Q86UW6 1770 aaPredicted RBP16.94■□□□□ 0.3
LYRM4-203ENST00000458438 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
LYRM4-203ENST00000458438 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.34e-11■■■■□ 26.3
LYRM4-203ENST00000458438 TAF7Q15545 349 aaPredicted RBP16.92■□□□□ 0.3
LYRM4-203ENST00000458438 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
LYRM4-203ENST00000458438 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
LYRM4-203ENST00000458438 ZPR1O75312 459 aa16.91■□□□□ 0.3
LYRM4-203ENST00000458438 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
LYRM4-203ENST00000458438 NARFQ9UHQ1 456 aa16.91■□□□□ 0.3
LYRM4-203ENST00000458438 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
LYRM4-203ENST00000458438 A1BGP04217 495 aa16.9■□□□□ 0.3
LYRM4-203ENST00000458438 TM4SF1P30408 202 aa16.9■□□□□ 0.3
LYRM4-203ENST00000458438 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
LYRM4-203ENST00000458438 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
LYRM4-203ENST00000458438 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
LYRM4-203ENST00000458438 AFDNP55196 1824 aaKnown RBP16.9■□□□□ 0.3
LYRM4-203ENST00000458438 LAMB4A4D0S4 1761 aa16.89■□□□□ 0.3
LYRM4-203ENST00000458438 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
LYRM4-203ENST00000458438 SCN7AQ01118 1682 aa16.89■□□□□ 0.29
LYRM4-203ENST00000458438 DDR1Q08345 913 aa16.89■□□□□ 0.29
LYRM4-203ENST00000458438 BCL2L12Q9HB09 334 aa16.89■□□□□ 0.29
LYRM4-203ENST00000458438 PXDNLA1KZ92 1463 aa16.88■□□□□ 0.29
LYRM4-203ENST00000458438 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
LYRM4-203ENST00000458438 WWC3Q9ULE0 1092 aa16.88■□□□□ 0.29
LYRM4-203ENST00000458438 UTRNP46939 3433 aa16.88■□□□□ 0.29
LYRM4-203ENST00000458438 NRXN2Q9P2S2 1712 aa16.87■□□□□ 0.29
LYRM4-203ENST00000458438 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
LYRM4-203ENST00000458438 A0A087WZG4 1122 aa16.87■□□□□ 0.29
LYRM4-203ENST00000458438 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
LYRM4-203ENST00000458438 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
LYRM4-203ENST00000458438 IL6STP40189 918 aaPredicted RBP16.87■□□□□ 0.29
LYRM4-203ENST00000458438 RIPK4P57078 832 aa16.87■□□□□ 0.29
LYRM4-203ENST00000458438 WDR43Q15061 677 aaKnown RBP eCLIP16.87■□□□□ 0.29
LYRM4-203ENST00000458438 BCORQ6W2J9 1755 aa16.87■□□□□ 0.29
LYRM4-203ENST00000458438 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
LYRM4-203ENST00000458438 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
LYRM4-203ENST00000458438 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
LYRM4-203ENST00000458438 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
LYRM4-203ENST00000458438 TGFB2P61812 414 aa16.86■□□□□ 0.29
LYRM4-203ENST00000458438 NFIXQ14938 502 aa16.86■□□□□ 0.29
LYRM4-203ENST00000458438 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
LYRM4-203ENST00000458438 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
LYRM4-203ENST00000458438 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
LYRM4-203ENST00000458438 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
LYRM4-203ENST00000458438 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
LYRM4-203ENST00000458438 A0A0G2JLW4 131 aa16.85■□□□□ 0.29
LYRM4-203ENST00000458438 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
LYRM4-203ENST00000458438 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
LYRM4-203ENST00000458438 DPEP1P16444 411 aa16.83■□□□□ 0.28
LYRM4-203ENST00000458438 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
LYRM4-203ENST00000458438 NEUROD2Q15784 382 aa16.83■□□□□ 0.28
LYRM4-203ENST00000458438 NBPF26B4DH59 902 aa16.82■□□□□ 0.28
LYRM4-203ENST00000458438 KCNA3P22001 575 aa16.82■□□□□ 0.28
LYRM4-203ENST00000458438 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
LYRM4-203ENST00000458438 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
LYRM4-203ENST00000458438 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
LYRM4-203ENST00000458438 NBPF15Q8N660 670 aa16.82■□□□□ 0.28
LYRM4-203ENST00000458438 GIGYF1O75420 1035 aaPredicted RBP16.81■□□□□ 0.28
LYRM4-203ENST00000458438 SERPINB2P05120 415 aa16.81■□□□□ 0.28
LYRM4-203ENST00000458438 LMOD3Q0VAK6 560 aa16.81■□□□□ 0.28
LYRM4-203ENST00000458438 TBC1D9BQ66K14 1250 aa16.81■□□□□ 0.28
LYRM4-203ENST00000458438 DZIP3Q86Y13 1208 aaKnown RBP16.81■□□□□ 0.28
LYRM4-203ENST00000458438 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
LYRM4-203ENST00000458438 CAMTA2O94983 1202 aa16.8■□□□□ 0.28
LYRM4-203ENST00000458438 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
LYRM4-203ENST00000458438 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
LYRM4-203ENST00000458438 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
LYRM4-203ENST00000458438 DLEC1Q9Y238 1755 aa16.79■□□□□ 0.28
LYRM4-203ENST00000458438 CHRNA5P30532 468 aa16.79■□□□□ 0.28
LYRM4-203ENST00000458438 CCDC184Q52MB2 194 aa16.79■□□□□ 0.28
LYRM4-203ENST00000458438 ZNF784Q8NCA9 323 aaPredicted RBP16.79■□□□□ 0.28
LYRM4-203ENST00000458438 BCS1LQ9Y276 419 aa16.79■□□□□ 0.28
LYRM4-203ENST00000458438 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
LYRM4-203ENST00000458438 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
LYRM4-203ENST00000458438 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
LYRM4-203ENST00000458438 NUP98P52948 1817 aa16.75■□□□□ 0.27
LYRM4-203ENST00000458438 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
LYRM4-203ENST00000458438 CHL1O00533 1208 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 APAF1O14727 1248 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 PRR5LQ6MZQ0 368 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 CCDC24Q8N4L8 307 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 NGEFQ8N5V2 710 aa16.74■□□□□ 0.27
LYRM4-203ENST00000458438 COL11A2P13942 1736 aaPredicted RBP16.73■□□□□ 0.27
LYRM4-203ENST00000458438 MYL6BP14649 208 aa16.73■□□□□ 0.27
LYRM4-203ENST00000458438 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
LYRM4-203ENST00000458438 ZNF652Q9Y2D9 606 aa16.73■□□□□ 0.27
LYRM4-203ENST00000458438 LAS1LQ9Y4W2 734 aaKnown RBP16.73■□□□□ 0.27
LYRM4-203ENST00000458438 ANP32CO43423 234 aa16.72■□□□□ 0.27
LYRM4-203ENST00000458438 HLFQ16534 295 aa16.72■□□□□ 0.27
LYRM4-203ENST00000458438 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms