RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 TM4SF1P30408 202 aa16.51■□□□□ 0.23
VEGFA-210ENST00000457104 DDR1Q08345 913 aa16.51■□□□□ 0.23
VEGFA-210ENST00000457104 WWC3Q9ULE0 1092 aa16.51■□□□□ 0.23
VEGFA-210ENST00000457104 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
VEGFA-210ENST00000457104 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 TGFB2P61812 414 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
VEGFA-210ENST00000457104 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 MCM10Q7L590 875 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
VEGFA-210ENST00000457104 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 A0A0G2JLW4 131 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 ZPR1O75312 459 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 STARD3NLO95772 234 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 EIF5P55010 431 aaKnown RBP16.49■□□□□ 0.23
VEGFA-210ENST00000457104 DCTN1Q14203 1278 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
VEGFA-210ENST00000457104 POLRMTO00411 1230 aaKnown RBP16.48■□□□□ 0.23
VEGFA-210ENST00000457104 HTATSF1O43719 755 aaKnown RBP16.48■□□□□ 0.23
VEGFA-210ENST00000457104 CANXP27824 592 aaKnown RBP16.48■□□□□ 0.23
VEGFA-210ENST00000457104 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
VEGFA-210ENST00000457104 TEX13AQ9BXU3 409 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-210ENST00000457104 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
VEGFA-210ENST00000457104 KDM3BQ7LBC6 1761 aa16.48■□□□□ 0.23
VEGFA-210ENST00000457104 DPEP1P16444 411 aa16.47■□□□□ 0.23
VEGFA-210ENST00000457104 KCNA3P22001 575 aa16.47■□□□□ 0.23
VEGFA-210ENST00000457104 RALBP1Q15311 655 aa16.47■□□□□ 0.23
VEGFA-210ENST00000457104 RTF1Q92541 710 aaKnown RBP16.47■□□□□ 0.23
VEGFA-210ENST00000457104 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
VEGFA-210ENST00000457104 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
VEGFA-210ENST00000457104 A1BGP04217 495 aa16.45■□□□□ 0.22
VEGFA-210ENST00000457104 NFIXQ14938 502 aa16.45■□□□□ 0.22
VEGFA-210ENST00000457104 DLEC1Q9Y238 1755 aa16.45■□□□□ 0.22
VEGFA-210ENST00000457104 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
VEGFA-210ENST00000457104 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
VEGFA-210ENST00000457104 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
VEGFA-210ENST00000457104 ADCY9O60503 1353 aa16.43■□□□□ 0.22
VEGFA-210ENST00000457104 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-210ENST00000457104 TAF7Q15545 349 aaPredicted RBP16.43■□□□□ 0.22
VEGFA-210ENST00000457104 A0A087WZG4 1122 aa16.42■□□□□ 0.22
VEGFA-210ENST00000457104 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
VEGFA-210ENST00000457104 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
VEGFA-210ENST00000457104 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
VEGFA-210ENST00000457104 BCS1LQ9Y276 419 aa16.42■□□□□ 0.22
VEGFA-210ENST00000457104 SERPINB2P05120 415 aa16.41■□□□□ 0.22
VEGFA-210ENST00000457104 NEFMP07197 916 aa16.41■□□□□ 0.22
VEGFA-210ENST00000457104 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
VEGFA-210ENST00000457104 SBF1O95248 1867 aa16.41■□□□□ 0.22
VEGFA-210ENST00000457104 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
VEGFA-210ENST00000457104 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
VEGFA-210ENST00000457104 CHRNA5P30532 468 aa16.4■□□□□ 0.22
VEGFA-210ENST00000457104 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
VEGFA-210ENST00000457104 TBC1D9BQ66K14 1250 aa16.4■□□□□ 0.22
VEGFA-210ENST00000457104 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
VEGFA-210ENST00000457104 CAMTA2O94983 1202 aa16.39■□□□□ 0.21
VEGFA-210ENST00000457104 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
VEGFA-210ENST00000457104 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
VEGFA-210ENST00000457104 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
VEGFA-210ENST00000457104 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
VEGFA-210ENST00000457104 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
VEGFA-210ENST00000457104 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
VEGFA-210ENST00000457104 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
VEGFA-210ENST00000457104 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
VEGFA-210ENST00000457104 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
VEGFA-210ENST00000457104 COL11A2P13942 1736 aaPredicted RBP16.37■□□□□ 0.21
VEGFA-210ENST00000457104 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
VEGFA-210ENST00000457104 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
VEGFA-210ENST00000457104 NUP98P52948 1817 aa16.36■□□□□ 0.21
VEGFA-210ENST00000457104 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
VEGFA-210ENST00000457104 DZIP3Q86Y13 1208 aaKnown RBP16.36■□□□□ 0.21
VEGFA-210ENST00000457104 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
VEGFA-210ENST00000457104 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-210ENST00000457104 C1QTNF8P60827 252 aa16.35■□□□□ 0.21
VEGFA-210ENST00000457104 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
VEGFA-210ENST00000457104 PRKRIP1Q9H875 184 aaPredicted RBP16.35■□□□□ 0.21
VEGFA-210ENST00000457104 CACNA1SQ13698 1873 aa16.35■□□□□ 0.21
VEGFA-210ENST00000457104 TMPOP42166 694 aaKnown RBP16.34■□□□□ 0.21
VEGFA-210ENST00000457104 RIPK4P57078 832 aa16.34■□□□□ 0.21
VEGFA-210ENST00000457104 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
VEGFA-210ENST00000457104 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.2
VEGFA-210ENST00000457104 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
VEGFA-210ENST00000457104 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
VEGFA-210ENST00000457104 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
VEGFA-210ENST00000457104 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
VEGFA-210ENST00000457104 ZNF526Q8TF50 670 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-210ENST00000457104 SETDB2Q96T68 719 aa16.32■□□□□ 0.2
VEGFA-210ENST00000457104 ARFGEF2Q9Y6D5 1785 aa16.31■□□□□ 0.2
VEGFA-210ENST00000457104 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
VEGFA-210ENST00000457104 GPBP1L1Q9HC44 474 aaPredicted RBP16.31■□□□□ 0.2
VEGFA-210ENST00000457104 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
VEGFA-210ENST00000457104 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
VEGFA-210ENST00000457104 H0YIN7 160 aa16.3■□□□□ 0.2
VEGFA-210ENST00000457104 RGL2O15211 777 aa16.3■□□□□ 0.2
VEGFA-210ENST00000457104 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
VEGFA-210ENST00000457104 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
VEGFA-210ENST00000457104 HLFQ16534 295 aa16.29■□□□□ 0.2
VEGFA-210ENST00000457104 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
VEGFA-210ENST00000457104 RUNDC1Q96C34 613 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms