RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 STK32BQ9NY57 414 aa18.31■□□□□ 0.52
TIMP1-205ENST00000456754 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
TIMP1-205ENST00000456754 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
TIMP1-205ENST00000456754 GNPATO15228 680 aa18.29■□□□□ 0.52
TIMP1-205ENST00000456754 PHF14O94880 888 aa18.29■□□□□ 0.52
TIMP1-205ENST00000456754 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
TIMP1-205ENST00000456754 PNPLA7Q6ZV29 1317 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 NBPF14Q5TI25 921 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 AK7Q96M32 723 aa18.28■□□□□ 0.52
TIMP1-205ENST00000456754 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
TIMP1-205ENST00000456754 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
TIMP1-205ENST00000456754 EIF2S2P20042 333 aaKnown RBP18.27■□□□□ 0.52
TIMP1-205ENST00000456754 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.52
TIMP1-205ENST00000456754 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
TIMP1-205ENST00000456754 SLFN5Q08AF3 891 aa18.27■□□□□ 0.52
TIMP1-205ENST00000456754 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
TIMP1-205ENST00000456754 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
TIMP1-205ENST00000456754 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
TIMP1-205ENST00000456754 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
TIMP1-205ENST00000456754 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
TIMP1-205ENST00000456754 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
TIMP1-205ENST00000456754 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
TIMP1-205ENST00000456754 ANXA1P04083 346 aa18.26■□□□□ 0.51
TIMP1-205ENST00000456754 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
TIMP1-205ENST00000456754 TCERG1O14776 1098 aaKnown RBP18.25■□□□□ 0.51
TIMP1-205ENST00000456754 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
TIMP1-205ENST00000456754 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
TIMP1-205ENST00000456754 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.24■□□□□ 0.51
TIMP1-205ENST00000456754 STARD3NLO95772 234 aa18.24■□□□□ 0.51
TIMP1-205ENST00000456754 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
TIMP1-205ENST00000456754 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
TIMP1-205ENST00000456754 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
TIMP1-205ENST00000456754 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
TIMP1-205ENST00000456754 PDIA6Q15084 440 aa18.23■□□□□ 0.51
TIMP1-205ENST00000456754 TRMT2AQ8IZ69 625 aaKnown RBP18.23■□□□□ 0.51
TIMP1-205ENST00000456754 TEX13AQ9BXU3 409 aaPredicted RBP18.23■□□□□ 0.51
TIMP1-205ENST00000456754 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
TIMP1-205ENST00000456754 E9PSI1 815 aa18.22■□□□□ 0.51
TIMP1-205ENST00000456754 MYL6BP14649 208 aa18.22■□□□□ 0.51
TIMP1-205ENST00000456754 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
TIMP1-205ENST00000456754 MSH5O43196 834 aa18.21■□□□□ 0.51
TIMP1-205ENST00000456754 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
TIMP1-205ENST00000456754 HDGFL1Q5TGJ6 251 aa18.21■□□□□ 0.51
TIMP1-205ENST00000456754 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
TIMP1-205ENST00000456754 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
TIMP1-205ENST00000456754 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
TIMP1-205ENST00000456754 COL15A1P39059 1388 aa18.2■□□□□ 0.5
TIMP1-205ENST00000456754 EIF5P55010 431 aaKnown RBP18.2■□□□□ 0.5
TIMP1-205ENST00000456754 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
TIMP1-205ENST00000456754 VAMP4O75379 141 aa18.19■□□□□ 0.5
TIMP1-205ENST00000456754 ZBTB7AO95365 584 aa18.19■□□□□ 0.5
TIMP1-205ENST00000456754 SSFA2P28290 1259 aa18.19■□□□□ 0.5
TIMP1-205ENST00000456754 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
TIMP1-205ENST00000456754 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
TIMP1-205ENST00000456754 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
TIMP1-205ENST00000456754 HOXB7P09629 217 aa18.17■□□□□ 0.5
TIMP1-205ENST00000456754 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
TIMP1-205ENST00000456754 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
TIMP1-205ENST00000456754 ARXQ96QS3 562 aa18.16■□□□□ 0.5
TIMP1-205ENST00000456754 BCL2L12Q9HB09 334 aa18.16■□□□□ 0.5
TIMP1-205ENST00000456754 ATF5Q9Y2D1 282 aaPredicted RBP18.16■□□□□ 0.5
TIMP1-205ENST00000456754 BCORQ6W2J9 1755 aa18.15■□□□□ 0.5
TIMP1-205ENST00000456754 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
TIMP1-205ENST00000456754 SCN7AQ01118 1682 aa18.15■□□□□ 0.5
TIMP1-205ENST00000456754 RFC4P35249 363 aa18.14■□□□□ 0.49
TIMP1-205ENST00000456754 AIMP1Q12904 312 aaKnown RBP18.14■□□□□ 0.49
TIMP1-205ENST00000456754 G2E3Q7L622 706 aa18.14■□□□□ 0.49
TIMP1-205ENST00000456754 PHAXQ9H814 394 aaKnown RBP18.14■□□□□ 0.49
TIMP1-205ENST00000456754 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
TIMP1-205ENST00000456754 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
TIMP1-205ENST00000456754 GYS1P13807 737 aa18.13■□□□□ 0.49
TIMP1-205ENST00000456754 ADRA2BP18089 450 aa18.13■□□□□ 0.49
TIMP1-205ENST00000456754 FKBP8Q14318 412 aa18.13■□□□□ 0.49
TIMP1-205ENST00000456754 DZIP3Q86Y13 1208 aaKnown RBP18.13■□□□□ 0.49
TIMP1-205ENST00000456754 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
TIMP1-205ENST00000456754 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 HLFQ16534 295 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 COPS6Q7L5N1 327 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 BCL2L13Q9BXK5 485 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 ERBB4Q15303 1308 aa18.12■□□□□ 0.49
TIMP1-205ENST00000456754 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
TIMP1-205ENST00000456754 DBF4Q9UBU7 674 aaPredicted RBP18.11■□□□□ 0.49
TIMP1-205ENST00000456754 COL24A1Q17RW2 1714 aa18.11■□□□□ 0.49
TIMP1-205ENST00000456754 NUP98P52948 1817 aa18.1■□□□□ 0.49
TIMP1-205ENST00000456754 HMGB2P26583 209 aaKnown RBP18.1■□□□□ 0.49
TIMP1-205ENST00000456754 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
TIMP1-205ENST00000456754 A0A087WZG4 1122 aa18.09■□□□□ 0.49
TIMP1-205ENST00000456754 ZPR1O75312 459 aa18.09■□□□□ 0.49
TIMP1-205ENST00000456754 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms