RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
LINC00959-201ENST00000456581 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
LINC00959-201ENST00000456581 DTNBO60941 627 aa15.25■□□□□ 0.03
LINC00959-201ENST00000456581 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
LINC00959-201ENST00000456581 NSFL1CQ9UNZ2 370 aaKnown RBP15.24■□□□□ 0.03
LINC00959-201ENST00000456581 KIF1AQ12756 1690 aa15.24■□□□□ 0.03
LINC00959-201ENST00000456581 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
LINC00959-201ENST00000456581 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
LINC00959-201ENST00000456581 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
LINC00959-201ENST00000456581 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
LINC00959-201ENST00000456581 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
LINC00959-201ENST00000456581 USP44Q9H0E7 712 aa15.23■□□□□ 0.03
LINC00959-201ENST00000456581 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
LINC00959-201ENST00000456581 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
LINC00959-201ENST00000456581 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
LINC00959-201ENST00000456581 RAPGEF4Q8WZA2 1011 aa15.23■□□□□ 0.03
LINC00959-201ENST00000456581 GNAI2P04899 355 aa15.22■□□□□ 0.03
LINC00959-201ENST00000456581 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
LINC00959-201ENST00000456581 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
LINC00959-201ENST00000456581 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
LINC00959-201ENST00000456581 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
LINC00959-201ENST00000456581 FOXD4L6Q3SYB3 417 aaPredicted RBP15.22■□□□□ 0.03
LINC00959-201ENST00000456581 FOXD4L3Q6VB84 417 aaPredicted RBP15.22■□□□□ 0.03
LINC00959-201ENST00000456581 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
LINC00959-201ENST00000456581 TPRNQ4KMQ1 711 aa15.21■□□□□ 0.03
LINC00959-201ENST00000456581 MPNDQ8N594 471 aa15.21■□□□□ 0.03
LINC00959-201ENST00000456581 MEGF6O75095 1541 aa15.21■□□□□ 0.02
LINC00959-201ENST00000456581 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.02
LINC00959-201ENST00000456581 NASPP49321 788 aaPredicted RBP15.21■□□□□ 0.02
LINC00959-201ENST00000456581 NFATC2IPQ8NCF5 419 aa15.21■□□□□ 0.02
LINC00959-201ENST00000456581 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
LINC00959-201ENST00000456581 GIGYF1O75420 1035 aaPredicted RBP15.2■□□□□ 0.02
LINC00959-201ENST00000456581 NBPF7P0C2Y1 421 aaPredicted RBP15.2■□□□□ 0.02
LINC00959-201ENST00000456581 CACNA1FO60840 1977 aa15.2■□□□□ 0.02
LINC00959-201ENST00000456581 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
LINC00959-201ENST00000456581 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
LINC00959-201ENST00000456581 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
LINC00959-201ENST00000456581 DCCP43146 1447 aa15.19■□□□□ 0.02
LINC00959-201ENST00000456581 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
LINC00959-201ENST00000456581 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
LINC00959-201ENST00000456581 PRPF40AO75400 957 aaKnown RBP15.19■□□□□ 0.02
LINC00959-201ENST00000456581 ARID3AQ99856 593 aa15.19■□□□□ 0.02
LINC00959-201ENST00000456581 RBSNQ9H1K0 784 aa15.19■□□□□ 0.02
LINC00959-201ENST00000456581 CYP27B1O15528 508 aa15.18■□□□□ 0.02
LINC00959-201ENST00000456581 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
LINC00959-201ENST00000456581 UBTFL1P0CB47 393 aaPredicted RBP15.18■□□□□ 0.02
LINC00959-201ENST00000456581 TATP17735 454 aaPredicted RBP15.18■□□□□ 0.02
LINC00959-201ENST00000456581 AIMP1Q12904 312 aaKnown RBP15.18■□□□□ 0.02
LINC00959-201ENST00000456581 RABEP1Q15276 862 aa15.18■□□□□ 0.02
LINC00959-201ENST00000456581 PHKG2P15735 406 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
LINC00959-201ENST00000456581 KDM6AO15550 1401 aaPredicted RBP15.17■□□□□ 0.02
LINC00959-201ENST00000456581 HMMRO75330 724 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 GNAI3P08754 354 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 SKOR2Q2VWA4 1001 aaPredicted RBP15.17■□□□□ 0.02
LINC00959-201ENST00000456581 GPT2Q8TD30 523 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 DNAAF4Q8WXU2 420 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 SRCIN1Q9C0H9 1055 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 LMBRD1Q9NUN5 540 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 ADCY9O60503 1353 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 COL18A1P39060 1754 aa15.17■□□□□ 0.02
LINC00959-201ENST00000456581 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 ZSCAN23Q3MJ62 389 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 PRDM11Q9NQV5 511 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 CWF19L2Q2TBE0 894 aaKnown RBP15.16■□□□□ 0.02
LINC00959-201ENST00000456581 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
LINC00959-201ENST00000456581 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 PALD1Q9ULE6 856 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 MAP3K2Q9Y2U5 619 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
LINC00959-201ENST00000456581 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 MYL6BP14649 208 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 SLC52A2Q9HAB3 445 aa15.15■□□□□ 0.02
LINC00959-201ENST00000456581 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
LINC00959-201ENST00000456581 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
LINC00959-201ENST00000456581 HOXB7P09629 217 aa15.14■□□□□ 0.01
LINC00959-201ENST00000456581 RNF214Q8ND24 703 aa15.14■□□□□ 0.01
LINC00959-201ENST00000456581 CERKQ8TCT0 537 aa15.14■□□□□ 0.01
LINC00959-201ENST00000456581 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
LINC00959-201ENST00000456581 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
LINC00959-201ENST00000456581 ZMYND15Q9H091 742 aa15.14■□□□□ 0.01
LINC00959-201ENST00000456581 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
LINC00959-201ENST00000456581 STRN4Q9NRL3 753 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 SPG7Q9UQ90 795 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 HEG1Q9ULI3 1381 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 NEK4P51957 841 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 PDE1AP54750 535 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
LINC00959-201ENST00000456581 PDIA6Q15084 440 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 TOM1L2Q6ZVM7 507 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 FBXO41Q8TF61 875 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 GDPD2Q9HCC8 539 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 TMEM63CQ9P1W3 806 aa15.12■□□□□ 0.01
LINC00959-201ENST00000456581 SRGAP3O43295 1099 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms