RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 HABP4Q5JVS0 413 aaKnown RBP8.24□□□□□ -1.09
SBDSP1-204ENST00000453858 NUTM2GQ5VZR2 741 aa8.24□□□□□ -1.09
SBDSP1-204ENST00000453858 PLEKHG2Q9H7P9 1386 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 POTECB2RU33 542 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 EXOC5O00471 708 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 OSBPP22059 807 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 GPIHBP1Q8IV16 184 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 DDX12PQ92771 950 aa8.23□□□□□ -1.09
SBDSP1-204ENST00000453858 AKAP12Q02952 1782 aa8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 BTAF1O14981 1849 aa8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 VEGFAP15692 232 aaPredicted RBP8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 RBM26Q5T8P6 1007 aaKnown RBP8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 ZC3H15Q8WU90 426 aaKnown RBP8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 KHSRPQ92945 711 aaKnown RBP eCLIP8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 ADGRF5Q8IZF2 1346 aa8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 VIRMAQ69YN4 1812 aaKnown RBP8.22□□□□□ -1.09
SBDSP1-204ENST00000453858 VPS8Q8N3P4 1428 aa8.21□□□□□ -1.09
SBDSP1-204ENST00000453858 GCP02774 474 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 NUDT7P0C024 238 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 PRKCSHP14314 528 aaPredicted RBP8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 PBX2P40425 430 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 FXR1P51114 621 aaKnown RBP eCLIP8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 FOSBP53539 338 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 RNF166Q96A37 237 aaPredicted RBP8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 AXIN2Q9Y2T1 843 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 NUP155O75694 1391 aa8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 TNRC6CQ9HCJ0 1690 aaKnown RBP8.21□□□□□ -1.1
SBDSP1-204ENST00000453858 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
SBDSP1-204ENST00000453858 KNDC1Q76NI1 1749 aa8.2□□□□□ -1.1
SBDSP1-204ENST00000453858 TOM1L2Q6ZVM7 507 aa8.2□□□□□ -1.1
SBDSP1-204ENST00000453858 PCDHGA10Q9Y5H3 936 aa8.2□□□□□ -1.1
SBDSP1-204ENST00000453858 COL18A1P39060 1754 aa8.2□□□□□ -1.1
SBDSP1-204ENST00000453858 QRICH2Q9H0J4 1663 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 GCC1Q96CN9 775 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 CARD10Q9BWT7 1032 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 WDR17Q8IZU2 1322 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 MUC3AQ02505 3323 aa8.19□□□□□ -1.1
SBDSP1-204ENST00000453858 A0A0G2JLW4 131 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 ZMYND10O75800 440 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 KCNA3P22001 575 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 AMIGO3Q86WK7 504 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 BCS1LQ9Y276 419 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 LAMA3Q16787 3333 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 CENPFP49454 3210 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
SBDSP1-204ENST00000453858 KIAA1551Q9HCM1 1747 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 WNK3Q9BYP7 1800 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 GLTPD2A6NH11 291 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 FCHSD2O94868 740 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 LSM11P83369 360 aaKnown RBP eCLIP8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 PPP4R3BQ5MIZ7 849 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 PRAM1Q96QH2 718 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
SBDSP1-204ENST00000453858 TGFB2P61812 414 aa8.16□□□□□ -1.1
SBDSP1-204ENST00000453858 HIC1Q14526 733 aa8.16□□□□□ -1.1
SBDSP1-204ENST00000453858 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
SBDSP1-204ENST00000453858 PPLO60437 1756 aa8.15□□□□□ -1.1
SBDSP1-204ENST00000453858 RASSF10A6NK89 507 aa8.15□□□□□ -1.1
SBDSP1-204ENST00000453858 MAP3K7O43318 606 aa8.15□□□□□ -1.1
SBDSP1-204ENST00000453858 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
SBDSP1-204ENST00000453858 SBF1O95248 1867 aa8.15□□□□□ -1.11
SBDSP1-204ENST00000453858 SPATA31E1Q6ZUB1 1445 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 KAT6BQ8WYB5 2073 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 ZC3H4Q9UPT8 1303 aaKnown RBP8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 SOX10P56693 466 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 ABTB2Q8N961 1025 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 FLAD1Q8NFF5 587 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 KIF1BO60333 1816 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 HTTP42858 3142 aa8.14□□□□□ -1.11
SBDSP1-204ENST00000453858 KDM6AO15550 1401 aaPredicted RBP8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 LY75O60449 1722 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 GNPATO15228 680 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 ITGBL1O95965 494 aaPredicted RBP8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 DPEP1P16444 411 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 ANKRD13DQ6ZTN6 518 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 KIF13BQ9NQT8 1826 aa8.13□□□□□ -1.11
SBDSP1-204ENST00000453858 NSD2O96028 1365 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 MINK1Q8N4C8 1332 aaPredicted RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 WDR33Q9C0J8 1336 aaKnown RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 TMEM88BA6NKF7 163 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 PTGDRQ13258 359 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 C6orf132Q5T0Z8 1188 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 POTEEQ6S8J3 1075 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 KRI1Q8N9T8 703 aaKnown RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 C14orf93Q9H972 538 aaKnown RBP8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 BCL2L12Q9HB09 334 aa8.12□□□□□ -1.11
SBDSP1-204ENST00000453858 CCNL1Q9UK58 526 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms