RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 SLC9A9Q8IVB4 645 aa8.74□□□□□ -1.01
USP25-206ENST00000453553 SCG3Q8WXD2 468 aaKnown RBP8.74□□□□□ -1.01
USP25-206ENST00000453553 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
USP25-206ENST00000453553 SPATA31C2B4DYI2 1134 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 C21orf2O43822 256 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 PRMT3O60678 531 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 VSIG8P0DPA2 414 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 IGFBP4P22692 258 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 GSK3AP49840 483 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 TBCELQ5QJ74 424 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 RHBDD1Q8TEB9 315 aa8.73□□□□□ -1.01
USP25-206ENST00000453553 POU4F2Q12837 409 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 OCLNQ16625 522 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 NIFKQ9BYG3 293 aaKnown RBP8.72□□□□□ -1.01
USP25-206ENST00000453553 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
USP25-206ENST00000453553 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
USP25-206ENST00000453553 MAN1A2O60476 641 aa8.71□□□□□ -1.02
USP25-206ENST00000453553 ATP2B4P23634 1241 aa8.71□□□□□ -1.02
USP25-206ENST00000453553 SSFA2P28290 1259 aa8.71□□□□□ -1.02
USP25-206ENST00000453553 TEAD4Q15561 434 aa8.71□□□□□ -1.02
USP25-206ENST00000453553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.71□□□□□ -1.02
USP25-206ENST00000453553 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
USP25-206ENST00000453553 CXXC1Q9P0U4 656 aaPredicted RBP8.71□□□□□ -1.02
USP25-206ENST00000453553 NOS2P35228 1153 aa8.7□□□□□ -1.02
USP25-206ENST00000453553 PSMA6P60900 246 aaKnown RBP8.7□□□□□ -1.02
USP25-206ENST00000453553 C4orf17Q53FE4 359 aa8.7□□□□□ -1.02
USP25-206ENST00000453553 NBPF10Q6P3W6 841 aaKnown RBP8.7□□□□□ -1.02
USP25-206ENST00000453553 TAS1R3Q7RTX0 852 aa8.7□□□□□ -1.02
USP25-206ENST00000453553 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
USP25-206ENST00000453553 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
USP25-206ENST00000453553 FOXO3O43524 673 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 RHOQP17081 205 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 PHLDB3Q6NSJ2 640 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 ZDHHC1Q8WTX9 485 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 C2orf49Q9BVC5 232 aaPredicted RBP8.69□□□□□ -1.02
USP25-206ENST00000453553 CHMP3Q9Y3E7 222 aa8.69□□□□□ -1.02
USP25-206ENST00000453553 SERTM1A2A2V5 107 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 PHKA2P46019 1235 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 C1orf216Q8TAB5 229 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
USP25-206ENST00000453553 BRD1O95696 1058 aa8.67□□□□□ -1.02
USP25-206ENST00000453553 FKBP5Q13451 457 aaPredicted RBP8.67□□□□□ -1.02
USP25-206ENST00000453553 KCTD17Q8N5Z5 321 aa8.67□□□□□ -1.02
USP25-206ENST00000453553 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
USP25-206ENST00000453553 PARP3Q9Y6F1 533 aa8.67□□□□□ -1.02
USP25-206ENST00000453553 EML1O00423 815 aa8.66□□□□□ -1.02
USP25-206ENST00000453553 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
USP25-206ENST00000453553 TIMMDC1Q9NPL8 285 aa8.66□□□□□ -1.02
USP25-206ENST00000453553 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP25-206ENST00000453553 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
USP25-206ENST00000453553 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
USP25-206ENST00000453553 VTI1AQ96AJ9 217 aa8.65□□□□□ -1.02
USP25-206ENST00000453553 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
USP25-206ENST00000453553 HCN4Q9Y3Q4 1203 aa8.65□□□□□ -1.02
USP25-206ENST00000453553 COL26A1Q96A83 441 aa8.64□□□□□ -1.03
USP25-206ENST00000453553 PTCD1O75127 700 aaKnown RBP8.63□□□□□ -1.03
USP25-206ENST00000453553 PPFIA3O75145 1194 aa8.63□□□□□ -1.03
USP25-206ENST00000453553 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
USP25-206ENST00000453553 SCNN1AP37088 669 aa8.63□□□□□ -1.03
USP25-206ENST00000453553 PTSQ03393 145 aa8.63□□□□□ -1.03
USP25-206ENST00000453553 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
USP25-206ENST00000453553 DYRK1BQ9Y463 629 aa8.63□□□□□ -1.03
USP25-206ENST00000453553 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 SLC35F4A4IF30 521 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 TXLNAP40222 546 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 CAPN12Q6ZSI9 719 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 ALDH16A1Q8IZ83 802 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 MKNK1Q9BUB5 465 aa8.62□□□□□ -1.03
USP25-206ENST00000453553 MSX1P28360 303 aa8.61□□□□□ -1.03
USP25-206ENST00000453553 PHACTR1Q9C0D0 580 aa8.61□□□□□ -1.03
USP25-206ENST00000453553 F11P03951 625 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
USP25-206ENST00000453553 KRT76Q01546 638 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
USP25-206ENST00000453553 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 NGLY1Q96IV0 654 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
USP25-206ENST00000453553 SEPT3Q9UH03 358 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
USP25-206ENST00000453553 KCNA1Q09470 495 aa8.59□□□□□ -1.03
USP25-206ENST00000453553 CCDC155Q8N6L0 562 aa8.59□□□□□ -1.03
USP25-206ENST00000453553 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
USP25-206ENST00000453553 MYO19Q96H55 970 aa8.59□□□□□ -1.03
USP25-206ENST00000453553 PATL2C9JE40 543 aaKnown RBP8.58□□□□□ -1.04
USP25-206ENST00000453553 ATP4AP20648 1035 aa8.58□□□□□ -1.04
USP25-206ENST00000453553 CCER1Q8TC90 406 aaPredicted RBP8.58□□□□□ -1.04
USP25-206ENST00000453553 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
USP25-206ENST00000453553 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms