RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 SBF1O95248 1867 aa19.46■□□□□ 0.71
LYSMD3-202ENST00000453259 COL15A1P39059 1388 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 DLEC1Q9Y238 1755 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 CYP19A1P11511 503 aaPredicted RBP19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 LMNB1P20700 586 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 CHRNA5P30532 468 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 USPL1Q5W0Q7 1092 aa19.45■□□□□ 0.7
LYSMD3-202ENST00000453259 HSPA5P11021 654 aaKnown RBP19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
LYSMD3-202ENST00000453259 RRAGCQ9HB90 399 aa19.43■□□□□ 0.7
LYSMD3-202ENST00000453259 NFIXQ14938 502 aa19.42■□□□□ 0.7
LYSMD3-202ENST00000453259 GLTPD2A6NH11 291 aa19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 VEGFAP15692 232 aaPredicted RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 TTLL6Q8N841 843 aa19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
LYSMD3-202ENST00000453259 A0A087WZG4 1122 aa19.4■□□□□ 0.7
LYSMD3-202ENST00000453259 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.7
LYSMD3-202ENST00000453259 H0YIN7 160 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 STARD3NLO95772 234 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 SERPINB2P05120 415 aa19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 AMER1Q5JTC6 1135 aaPredicted RBP19.39■□□□□ 0.69
LYSMD3-202ENST00000453259 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
LYSMD3-202ENST00000453259 ZBTB1Q9Y2K1 713 aa19.38■□□□□ 0.69
LYSMD3-202ENST00000453259 TEX13AQ9BXU3 409 aaPredicted RBP19.37■□□□□ 0.69
LYSMD3-202ENST00000453259 TIAM2Q8IVF5 1701 aa19.37■□□□□ 0.69
LYSMD3-202ENST00000453259 RASSF7Q02833 373 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 C2CD5Q86YS7 1000 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 TTC5Q8N0Z6 440 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 BCL2L12Q9HB09 334 aa19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
LYSMD3-202ENST00000453259 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
LYSMD3-202ENST00000453259 DIAPH1O60610 1272 aaKnown RBP19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 PDE6BP35913 854 aa19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 MTHFSDQ2M296 383 aaKnown RBP19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 BRIP1Q9BX63 1249 aa19.34■□□□□ 0.69
LYSMD3-202ENST00000453259 SCN7AQ01118 1682 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 CARMIL3Q8ND23 1372 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
LYSMD3-202ENST00000453259 HTRA3P83110 453 aa19.33■□□□□ 0.68
LYSMD3-202ENST00000453259 NFKBIEO00221 500 aa19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 HMOX1P09601 288 aa19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 COL13A1Q5TAT6 717 aaPredicted RBP19.32■□□□□ 0.68
LYSMD3-202ENST00000453259 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
LYSMD3-202ENST00000453259 TEFQ10587 303 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
LYSMD3-202ENST00000453259 PRELPP51888 382 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 DICER1Q9UPY3 1922 aaKnown RBP19.29■□□□□ 0.68
LYSMD3-202ENST00000453259 GNAT3A8MTJ3 354 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 CNKSR1Q969H4 720 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 FER1L6Q2WGJ9 1857 aa19.28■□□□□ 0.68
LYSMD3-202ENST00000453259 ANKRD31Q8N7Z5 1873 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 ERFEQ4G0M1 354 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 PRR5LQ6MZQ0 368 aa19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.68
LYSMD3-202ENST00000453259 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.67
LYSMD3-202ENST00000453259 KIF7Q2M1P5 1343 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 PCNTO95613 3336 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 RGL2O15211 777 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 TBC1D9BQ66K14 1250 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 STYK1Q6J9G0 422 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 CNBD1Q8NA66 436 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.671e-8■□□□□ 9.7
LYSMD3-202ENST00000453259 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
LYSMD3-202ENST00000453259 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 CEMIPQ8WUJ3 1361 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 ST5P78524 1137 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 COL11A2P13942 1736 aaPredicted RBP19.25■□□□□ 0.67
LYSMD3-202ENST00000453259 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 POTECB2RU33 542 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 C21orf2O43822 256 aa19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 HSPA1AP0DMV8 641 aaKnown RBP19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 HSPA1BP0DMV9 641 aaKnown RBP19.24■□□□□ 0.67
LYSMD3-202ENST00000453259 IQCA1LA6NCM1 817 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
LYSMD3-202ENST00000453259 NPHP1O15259 732 aa19.22■□□□□ 0.67
LYSMD3-202ENST00000453259 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
LYSMD3-202ENST00000453259 BCORQ6W2J9 1755 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 CAMTA2O94983 1202 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 SRGNP10124 158 aa19.21■□□□□ 0.67
LYSMD3-202ENST00000453259 TBC1D2BQ9UPU7 963 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms