RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
CHFR-205ENST00000450056 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
CHFR-205ENST00000450056 GNAI2P04899 355 aa16.78■□□□□ 0.28
CHFR-205ENST00000450056 FOSBP53539 338 aa16.78■□□□□ 0.28
CHFR-205ENST00000450056 AK2P54819 239 aa16.78■□□□□ 0.28
CHFR-205ENST00000450056 CUL4AQ13619 759 aa16.77■□□□□ 0.28
CHFR-205ENST00000450056 GJB2P29033 226 aa16.77■□□□□ 0.27
CHFR-205ENST00000450056 CEBPZQ03701 1054 aaKnown RBP16.77■□□□□ 0.27
CHFR-205ENST00000450056 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.27
CHFR-205ENST00000450056 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 TCEANC2Q96MN5 208 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
CHFR-205ENST00000450056 RTL1A6NKG5 1358 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 F13A1P00488 732 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 IL25Q9H293 177 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 SURF6O75683 361 aaKnown RBP16.76■□□□□ 0.27
CHFR-205ENST00000450056 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
CHFR-205ENST00000450056 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
CHFR-205ENST00000450056 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
CHFR-205ENST00000450056 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
CHFR-205ENST00000450056 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
CHFR-205ENST00000450056 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
CHFR-205ENST00000450056 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
CHFR-205ENST00000450056 GTF2F1P35269 517 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHFR-205ENST00000450056 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
CHFR-205ENST00000450056 QRICH2Q9H0J4 1663 aa16.75■□□□□ 0.27
CHFR-205ENST00000450056 BRPF1P55201 1214 aaPredicted RBP16.74■□□□□ 0.27
CHFR-205ENST00000450056 STK3Q13188 491 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 ZBTB9Q96C00 473 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 OGFRQ9NZT2 677 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
CHFR-205ENST00000450056 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 GTF2E1P29083 439 aaPredicted RBP16.74■□□□□ 0.27
CHFR-205ENST00000450056 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 ANO6Q4KMQ2 910 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 COG3Q96JB2 828 aa16.74■□□□□ 0.27
CHFR-205ENST00000450056 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
CHFR-205ENST00000450056 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
CHFR-205ENST00000450056 LARP1BQ659C4 914 aaKnown RBP16.73■□□□□ 0.27
CHFR-205ENST00000450056 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
CHFR-205ENST00000450056 MED14O60244 1454 aa16.73■□□□□ 0.27
CHFR-205ENST00000450056 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
CHFR-205ENST00000450056 LARGE1O95461 756 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 RASEFQ8IZ41 740 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 DACT1Q9NYF0 836 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 TPM3P06753 285 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 LIG1P18858 919 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 TYRO3Q06418 890 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
CHFR-205ENST00000450056 GOLGA6L19H0YKK7 550 aa16.71■□□□□ 0.27
CHFR-205ENST00000450056 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
CHFR-205ENST00000450056 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
CHFR-205ENST00000450056 DNAJC25Q9H1X3 360 aa16.71■□□□□ 0.27
CHFR-205ENST00000450056 FOXO3O43524 673 aa16.71■□□□□ 0.26
CHFR-205ENST00000450056 FAM200AQ8TCP9 573 aa16.71■□□□□ 0.26
CHFR-205ENST00000450056 FEZ1Q99689 392 aa16.71■□□□□ 0.26
CHFR-205ENST00000450056 ST7Q9NRC1 585 aa16.7■□□□□ 0.26
CHFR-205ENST00000450056 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
CHFR-205ENST00000450056 A0A087WWV3 80 aa16.7■□□□□ 0.26
CHFR-205ENST00000450056 PPFIA3O75145 1194 aa16.7■□□□□ 0.26
CHFR-205ENST00000450056 IL13P35225 146 aa16.7■□□□□ 0.26
CHFR-205ENST00000450056 CEP135Q66GS9 1140 aa16.7■□□□□ 0.26
CHFR-205ENST00000450056 ANAPC15P60006 121 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 ARID5BQ14865 1188 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 SNX14Q9Y5W7 946 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 BECN2A8MW95 431 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 ZNF165P49910 485 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 KRT85P78386 507 aa16.69■□□□□ 0.26
CHFR-205ENST00000450056 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 TCHHQ07283 1943 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 ANKRD7Q92527 254 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 CBX8Q9HC52 389 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 SMTNL1A8MU46 457 aa16.68■□□□□ 0.26
CHFR-205ENST00000450056 ZNF215Q9UL58 517 aaPredicted RBP16.68■□□□□ 0.26
CHFR-205ENST00000450056 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 CTNNA3Q9UI47 895 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
CHFR-205ENST00000450056 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
CHFR-205ENST00000450056 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
CHFR-205ENST00000450056 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 ELF2Q15723 593 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 GTF3C6Q969F1 213 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 ADGRB2O60241 1585 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 LRRC7Q96NW7 1537 aa16.67■□□□□ 0.26
CHFR-205ENST00000450056 SETD1AO15047 1707 aaKnown RBP16.66■□□□□ 0.26
CHFR-205ENST00000450056 CCDC66A2RUB6 948 aa16.66■□□□□ 0.26
CHFR-205ENST00000450056 ZSCAN25Q6NSZ9 544 aa16.66■□□□□ 0.26
CHFR-205ENST00000450056 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
CHFR-205ENST00000450056 CACTINQ8WUQ7 758 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms