RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 DNAAF4Q8WXU2 420 aa20.01■□□□□ 0.79
AP000253.1-201ENST00000449339 APBB1O00213 710 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 HMMRO75330 724 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 RTL5Q5HYW3 569 aaPredicted RBP20■□□□□ 0.79
AP000253.1-201ENST00000449339 GNAI3P08754 354 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 PDIA6Q15084 440 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 TTC5Q8N0Z6 440 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 SRCIN1Q9C0H9 1055 aa20■□□□□ 0.79
AP000253.1-201ENST00000449339 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
AP000253.1-201ENST00000449339 COL16A1Q07092 1604 aaPredicted RBP19.99■□□□□ 0.79
AP000253.1-201ENST00000449339 PLEKHM2Q8IWE5 1019 aa19.99■□□□□ 0.79
AP000253.1-201ENST00000449339 COL22A1Q8NFW1 1626 aaPredicted RBP19.99■□□□□ 0.79
AP000253.1-201ENST00000449339 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
AP000253.1-201ENST00000449339 COL14A1Q05707 1796 aaKnown RBP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 PHLPP1O60346 1717 aa19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 PIP4K2AP48426 406 aaPredicted RBP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 AIMP1Q12904 312 aaKnown RBP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 C16orf71Q8IYS4 520 aaPredicted RBP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 DDX21Q9NR30 783 aaKnown RBP eCLIP19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 MAP3K2Q9Y2U5 619 aa19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 USP16Q9Y5T5 823 aa19.98■□□□□ 0.79
AP000253.1-201ENST00000449339 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
AP000253.1-201ENST00000449339 MYL6BP14649 208 aa19.97■□□□□ 0.79
AP000253.1-201ENST00000449339 PIP4K2BP78356 416 aa19.97■□□□□ 0.79
AP000253.1-201ENST00000449339 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
AP000253.1-201ENST00000449339 UBTFL1P0CB47 393 aaPredicted RBP19.96■□□□□ 0.79
AP000253.1-201ENST00000449339 FMNL2Q96PY5 1086 aa19.96■□□□□ 0.79
AP000253.1-201ENST00000449339 SNRPA1P09661 255 aaKnown RBP19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 GSPT1P15170 499 aaKnown RBP19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 NKX1-1Q15270 411 aaPredicted RBP19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 KSR2Q6VAB6 950 aa19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 TBC1D9Q6ZT07 1266 aa19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 OTUD7AQ8TE49 926 aaPredicted RBP19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 GLI3P10071 1580 aa19.95■□□□□ 0.78
AP000253.1-201ENST00000449339 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
AP000253.1-201ENST00000449339 ERVV-2B6SEH9 535 aa19.94■□□□□ 0.78
AP000253.1-201ENST00000449339 TBC1D2Q9BYX2 928 aa19.94■□□□□ 0.78
AP000253.1-201ENST00000449339 EXOC6BQ9Y2D4 811 aa19.94■□□□□ 0.78
AP000253.1-201ENST00000449339 TOGARAM1Q9Y4F4 1720 aa19.93■□□□□ 0.78
AP000253.1-201ENST00000449339 TTC22Q5TAA0 569 aa19.93■□□□□ 0.78
AP000253.1-201ENST00000449339 RBM25P49756 843 aaKnown RBP19.92■□□□□ 0.78
AP000253.1-201ENST00000449339 CWF19L2Q2TBE0 894 aaKnown RBP19.92■□□□□ 0.78
AP000253.1-201ENST00000449339 CDC45O75419 566 aa19.92■□□□□ 0.78
AP000253.1-201ENST00000449339 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
AP000253.1-201ENST00000449339 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
AP000253.1-201ENST00000449339 NUTM2BA6NNL0 878 aaPredicted RBP19.9■□□□□ 0.78
AP000253.1-201ENST00000449339 NUTM2EB1AL46 878 aaPredicted RBP19.9■□□□□ 0.78
AP000253.1-201ENST00000449339 NUTM2AQ8IVF1 878 aaPredicted RBP19.9■□□□□ 0.78
AP000253.1-201ENST00000449339 UBR2Q8IWV8 1755 aa19.9■□□□□ 0.78
AP000253.1-201ENST00000449339 LRP10Q7Z4F1 713 aa19.9■□□□□ 0.78
AP000253.1-201ENST00000449339 PLCH1Q4KWH8 1693 aa19.89■□□□□ 0.78
AP000253.1-201ENST00000449339 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 DDX58O95786 925 aaKnown RBP19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 NFKBIBQ15653 356 aa19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 LAMB4A4D0S4 1761 aa19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 DISP2A7MBM2 1401 aa19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 KCPQ6ZWJ8 1503 aa19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 PAPPAQ13219 1627 aa19.89■□□□□ 0.77
AP000253.1-201ENST00000449339 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
AP000253.1-201ENST00000449339 RIC3Q7Z5B4 369 aa19.88■□□□□ 0.77
AP000253.1-201ENST00000449339 TOM1O60784 492 aa19.88■□□□□ 0.77
AP000253.1-201ENST00000449339 ALDH1L1O75891 902 aa19.87■□□□□ 0.77
AP000253.1-201ENST00000449339 C9orf78Q9NZ63 289 aaPredicted RBP19.87■□□□□ 0.77
AP000253.1-201ENST00000449339 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
AP000253.1-201ENST00000449339 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
AP000253.1-201ENST00000449339 LRRCC1Q9C099 1032 aa19.87■□□□□ 0.77
AP000253.1-201ENST00000449339 IGKV5-2P06315 115 aa19.86■□□□□ 0.77
AP000253.1-201ENST00000449339 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
AP000253.1-201ENST00000449339 LINS1Q8NG48 757 aa19.86■□□□□ 0.77
AP000253.1-201ENST00000449339 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
AP000253.1-201ENST00000449339 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 SRGAP3O43295 1099 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 SDSP20132 328 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 NBPF14Q5TI25 921 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 OSBPL3Q9H4L5 887 aa19.85■□□□□ 0.77
AP000253.1-201ENST00000449339 UBAP1LF5GYI3 381 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 EIF5BO60841 1220 aaKnown RBP19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 POLA2Q14181 598 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 MYD88Q99836 296 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 ITGB4P16144 1822 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 PDE1AP54750 535 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 ANKRD13DQ6ZTN6 518 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 PIGBQ92521 554 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 ANTXR1Q9H6X2 564 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 WNK3Q9BYP7 1800 aa19.84■□□□□ 0.77
AP000253.1-201ENST00000449339 NRAPQ86VF7 1730 aa19.83■□□□□ 0.77
AP000253.1-201ENST00000449339 A1BGP04217 495 aa19.83■□□□□ 0.77
AP000253.1-201ENST00000449339 ASAP1Q9ULH1 1129 aa19.83■□□□□ 0.77
AP000253.1-201ENST00000449339 TNS2Q63HR2 1409 aa19.83■□□□□ 0.77
AP000253.1-201ENST00000449339 METTL22Q9BUU2 404 aaPredicted RBP19.83■□□□□ 0.76
AP000253.1-201ENST00000449339 GRM8O00222 908 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 NEURL1BA8MQ27 555 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 EXOC5O00471 708 aa19.82■□□□□ 0.76
AP000253.1-201ENST00000449339 SURF6O75683 361 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms