RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 PXDNQ92626 1479 aa20.67■□□□□ 0.9
TOM1-210ENST00000449058 BTBD11A6QL63 1104 aa20.67■□□□□ 0.9
TOM1-210ENST00000449058 MCCP23508 829 aa20.67■□□□□ 0.9
TOM1-210ENST00000449058 MCM2P49736 904 aa20.67■□□□□ 0.9
TOM1-210ENST00000449058 NEK4P51957 841 aa20.67■□□□□ 0.9
TOM1-210ENST00000449058 RRAGDQ9NQL2 400 aaPredicted RBP20.67■□□□□ 0.9
TOM1-210ENST00000449058 SIPA1L3O60292 1781 aaPredicted RBP20.67■□□□□ 0.9
TOM1-210ENST00000449058 TRPM3Q9HCF6 1732 aaPredicted RBP20.67■□□□□ 0.9
TOM1-210ENST00000449058 ADCY9O60503 1353 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
TOM1-210ENST00000449058 SURF6O75683 361 aaKnown RBP20.66■□□□□ 0.9
TOM1-210ENST00000449058 GCP02774 474 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 NBPF7P0C2Y1 421 aaPredicted RBP20.66■□□□□ 0.9
TOM1-210ENST00000449058 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 ZBTB7CA1YPR0 619 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 RHPN1Q8TCX5 695 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 PALD1Q9ULE6 856 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 ZDHHC9Q9Y397 364 aa20.66■□□□□ 0.9
TOM1-210ENST00000449058 ADAMTSL3P82987 1691 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 MPRIPQ6WCQ1 1025 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 ANO2Q9NQ90 1003 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 DDX49Q9Y6V7 483 aaKnown RBP20.65■□□□□ 0.9
TOM1-210ENST00000449058 CRYBG1Q9Y4K1 1723 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 RNMTO43148 476 aaKnown RBP20.65■□□□□ 0.9
TOM1-210ENST00000449058 SRGAP3O43295 1099 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 NUTM1Q86Y26 1132 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 TMX3Q96JJ7 454 aa20.65■□□□□ 0.9
TOM1-210ENST00000449058 NPHP4O75161 1426 aaPredicted RBP20.64■□□□□ 0.9
TOM1-210ENST00000449058 HEG1Q9ULI3 1381 aa20.64■□□□□ 0.9
TOM1-210ENST00000449058 PI4K2BQ8TCG2 481 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 KIF1BPQ96EK5 621 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 LMBRD1Q9NUN5 540 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 ADAMTS7Q9UKP4 1686 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 LMTK3Q96Q04 1460 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 ORAI2Q96SN7 254 aa20.64■□□□□ 0.89
TOM1-210ENST00000449058 CUL4AQ13619 759 aa20.63■□□□□ 0.89
TOM1-210ENST00000449058 DBF4Q9UBU7 674 aaPredicted RBP20.63■□□□□ 0.89
TOM1-210ENST00000449058 C1orf141Q5JVX7 400 aa20.62■□□□□ 0.89
TOM1-210ENST00000449058 ANXA1P04083 346 aa20.61■□□□□ 0.89
TOM1-210ENST00000449058 MTX1Q13505 466 aa20.61■□□□□ 0.89
TOM1-210ENST00000449058 IL25Q9H293 177 aa20.61■□□□□ 0.89
TOM1-210ENST00000449058 HSP90AB4PQ58FF6 505 aa20.61■□□□□ 0.89
TOM1-210ENST00000449058 ANKRD24Q8TF21 1146 aa20.61■□□□□ 0.89
TOM1-210ENST00000449058 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
TOM1-210ENST00000449058 GIGYF1O75420 1035 aaPredicted RBP20.6■□□□□ 0.89
TOM1-210ENST00000449058 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
TOM1-210ENST00000449058 HSPA4P34932 840 aa20.59■□□□□ 0.89
TOM1-210ENST00000449058 INTS4Q96HW7 963 aaKnown RBP20.59■□□□□ 0.89
TOM1-210ENST00000449058 KIF1AQ12756 1690 aa20.59■□□□□ 0.89
TOM1-210ENST00000449058 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
TOM1-210ENST00000449058 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
TOM1-210ENST00000449058 ZNF445P59923 1031 aa20.58■□□□□ 0.89
TOM1-210ENST00000449058 MST1RQ04912 1400 aa20.58■□□□□ 0.88
TOM1-210ENST00000449058 SGSM2O43147 1006 aa20.57■□□□□ 0.88
TOM1-210ENST00000449058 PROSER3Q2NL68 480 aa20.57■□□□□ 0.88
TOM1-210ENST00000449058 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
TOM1-210ENST00000449058 AXIN2Q9Y2T1 843 aa20.57■□□□□ 0.88
TOM1-210ENST00000449058 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
TOM1-210ENST00000449058 TTC41PQ6P2S7 1318 aa20.56■□□□□ 0.88
TOM1-210ENST00000449058 RAD50Q92878 1312 aa20.56■□□□□ 0.88
TOM1-210ENST00000449058 BRD1O95696 1058 aa20.56■□□□□ 0.88
TOM1-210ENST00000449058 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
TOM1-210ENST00000449058 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
TOM1-210ENST00000449058 ALS2Q96Q42 1657 aa20.55■□□□□ 0.88
TOM1-210ENST00000449058 PRPF40AO75400 957 aaKnown RBP20.54■□□□□ 0.88
TOM1-210ENST00000449058 ANO8Q9HCE9 1232 aaPredicted RBP20.54■□□□□ 0.88
TOM1-210ENST00000449058 CAVIN1Q6NZI2 390 aaKnown RBP20.54■□□□□ 0.88
TOM1-210ENST00000449058 KRT28Q7Z3Y7 464 aa20.54■□□□□ 0.88
TOM1-210ENST00000449058 UPF3BQ9BZI7 483 aaKnown RBP20.54■□□□□ 0.88
TOM1-210ENST00000449058 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
TOM1-210ENST00000449058 ZSCAN23Q3MJ62 389 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 GPT2Q8TD30 523 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 LSG1Q9H089 658 aaKnown RBP20.53■□□□□ 0.88
TOM1-210ENST00000449058 HDAC5Q9UQL6 1122 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 SCN11AQ9UI33 1791 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 C1orf167Q5SNV9 1468 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 GLRX3O76003 335 aaKnown RBP20.53■□□□□ 0.88
TOM1-210ENST00000449058 CLCN1P35523 988 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 LMOD2Q6P5Q4 547 aa20.53■□□□□ 0.88
TOM1-210ENST00000449058 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
TOM1-210ENST00000449058 UTYO14607 1347 aa20.52■□□□□ 0.88
TOM1-210ENST00000449058 ERBB3P21860 1342 aa20.52■□□□□ 0.88
TOM1-210ENST00000449058 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
TOM1-210ENST00000449058 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
TOM1-210ENST00000449058 NASPP49321 788 aaPredicted RBP20.51■□□□□ 0.87
TOM1-210ENST00000449058 LINS1Q8NG48 757 aa20.51■□□□□ 0.87
TOM1-210ENST00000449058 OS9Q13438 667 aaPredicted RBP20.51■□□□□ 0.87
TOM1-210ENST00000449058 ERC1Q8IUD2 1116 aa20.51■□□□□ 0.87
TOM1-210ENST00000449058 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
TOM1-210ENST00000449058 PPP1R9BQ96SB3 815 aa20.51■□□□□ 0.87
TOM1-210ENST00000449058 DDX21Q9NR30 783 aaKnown RBP eCLIP20.51■□□□□ 0.87
TOM1-210ENST00000449058 SNX14Q9Y5W7 946 aa20.51■□□□□ 0.87
TOM1-210ENST00000449058 C5P01031 1676 aa20.51■□□□□ 0.87
TOM1-210ENST00000449058 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
TOM1-210ENST00000449058 NOL8Q76FK4 1167 aaKnown RBP20.5■□□□□ 0.87
TOM1-210ENST00000449058 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
TOM1-210ENST00000449058 CCDC173Q0VFZ6 552 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms