RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 A1BGP04217 495 aa15.33■□□□□ 0.04
RCL1-208ENST00000448872 VAMP4O75379 141 aa15.32■□□□□ 0.04
RCL1-208ENST00000448872 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
RCL1-208ENST00000448872 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
RCL1-208ENST00000448872 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
RCL1-208ENST00000448872 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
RCL1-208ENST00000448872 ANO8Q9HCE9 1232 aaPredicted RBP15.32■□□□□ 0.04
RCL1-208ENST00000448872 HDGFL1Q5TGJ6 251 aa15.31■□□□□ 0.04
RCL1-208ENST00000448872 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
RCL1-208ENST00000448872 UBR2Q8IWV8 1755 aa15.31■□□□□ 0.04
RCL1-208ENST00000448872 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
RCL1-208ENST00000448872 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 STARD3NLO95772 234 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 ANXA1P04083 346 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 HOXB7P09629 217 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 CANXP27824 592 aaKnown RBP15.3■□□□□ 0.04
RCL1-208ENST00000448872 PROSER3Q2NL68 480 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
RCL1-208ENST00000448872 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
RCL1-208ENST00000448872 TEX13AQ9BXU3 409 aaPredicted RBP15.3■□□□□ 0.04
RCL1-208ENST00000448872 PDIA6Q15084 440 aa15.29■□□□□ 0.04
RCL1-208ENST00000448872 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
RCL1-208ENST00000448872 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
RCL1-208ENST00000448872 SOCS7O14512 581 aa15.28■□□□□ 0.04
RCL1-208ENST00000448872 CHPF2Q9P2E5 772 aa15.28■□□□□ 0.04
RCL1-208ENST00000448872 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
RCL1-208ENST00000448872 LY75O60449 1722 aa15.28■□□□□ 0.04
RCL1-208ENST00000448872 TJP1Q07157 1748 aa15.28■□□□□ 0.04
RCL1-208ENST00000448872 GNPATO15228 680 aa15.27■□□□□ 0.04
RCL1-208ENST00000448872 MYL6BP14649 208 aa15.27■□□□□ 0.04
RCL1-208ENST00000448872 AK7Q96M32 723 aa15.27■□□□□ 0.04
RCL1-208ENST00000448872 PHF14O94880 888 aa15.27■□□□□ 0.03
RCL1-208ENST00000448872 BCL2L13Q9BXK5 485 aa15.27■□□□□ 0.03
RCL1-208ENST00000448872 ZNF330Q9Y3S2 320 aaPredicted RBP15.27■□□□□ 0.03
RCL1-208ENST00000448872 KAT6BQ8WYB5 2073 aa15.26■□□□□ 0.03
RCL1-208ENST00000448872 C5P01031 1676 aa15.26■□□□□ 0.03
RCL1-208ENST00000448872 RC3H1Q5TC82 1133 aaKnown RBP15.26■□□□□ 0.03
RCL1-208ENST00000448872 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
RCL1-208ENST00000448872 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
RCL1-208ENST00000448872 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
RCL1-208ENST00000448872 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
RCL1-208ENST00000448872 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
RCL1-208ENST00000448872 TFCP2L1Q9NZI6 479 aa15.25■□□□□ 0.03
RCL1-208ENST00000448872 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
RCL1-208ENST00000448872 SLC4A2P04920 1241 aa15.24■□□□□ 0.03
RCL1-208ENST00000448872 RARSP54136 660 aaKnown RBP15.24■□□□□ 0.03
RCL1-208ENST00000448872 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
RCL1-208ENST00000448872 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
RCL1-208ENST00000448872 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
RCL1-208ENST00000448872 DDX21Q9NR30 783 aaKnown RBP eCLIP15.24■□□□□ 0.03
RCL1-208ENST00000448872 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
RCL1-208ENST00000448872 RGPD3A6NKT7 1758 aaPredicted RBP15.23■□□□□ 0.03
RCL1-208ENST00000448872 RGPD4Q7Z3J3 1758 aa15.23■□□□□ 0.03
RCL1-208ENST00000448872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.23■□□□□ 0.03
RCL1-208ENST00000448872 G2E3Q7L622 706 aa15.23■□□□□ 0.03
RCL1-208ENST00000448872 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
RCL1-208ENST00000448872 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
RCL1-208ENST00000448872 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
RCL1-208ENST00000448872 BCAR3O75815 825 aa15.22■□□□□ 0.03
RCL1-208ENST00000448872 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
RCL1-208ENST00000448872 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
RCL1-208ENST00000448872 TTLL7Q6ZT98 887 aa15.22■□□□□ 0.03
RCL1-208ENST00000448872 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
RCL1-208ENST00000448872 STK31Q9BXU1 1019 aa15.22■□□□□ 0.03
RCL1-208ENST00000448872 PDGFDQ9GZP0 370 aaPredicted RBP15.22■□□□□ 0.03
RCL1-208ENST00000448872 ERBB4Q15303 1308 aa15.22■□□□□ 0.03
RCL1-208ENST00000448872 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
RCL1-208ENST00000448872 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
RCL1-208ENST00000448872 XAGE3Q8WTP9 111 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 ARHGEF1Q92888 912 aaKnown RBP15.21■□□□□ 0.03
RCL1-208ENST00000448872 ARXQ96QS3 562 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 RREB1Q92766 1687 aa15.21■□□□□ 0.03
RCL1-208ENST00000448872 COL15A1P39059 1388 aa15.21■□□□□ 0.02
RCL1-208ENST00000448872 R3HDM1Q15032 1099 aaKnown RBP15.2■□□□□ 0.02
RCL1-208ENST00000448872 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 COL23A1Q86Y22 540 aaPredicted RBP15.2■□□□□ 0.02
RCL1-208ENST00000448872 SRP68Q9UHB9 627 aaKnown RBP15.2■□□□□ 0.02
RCL1-208ENST00000448872 NUP188Q5SRE5 1749 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 PSDA5PKW4 1024 aaPredicted RBP15.2■□□□□ 0.02
RCL1-208ENST00000448872 SSFA2P28290 1259 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 ALDH1L2Q3SY69 923 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
RCL1-208ENST00000448872 COL5A3P25940 1745 aaPredicted RBP15.19■□□□□ 0.02
RCL1-208ENST00000448872 DZIP3Q86Y13 1208 aaKnown RBP15.19■□□□□ 0.02
RCL1-208ENST00000448872 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
RCL1-208ENST00000448872 RCAN3Q9UKA8 241 aa15.19■□□□□ 0.02
RCL1-208ENST00000448872 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
RCL1-208ENST00000448872 FLIIQ13045 1269 aa15.18■□□□□ 0.02
RCL1-208ENST00000448872 CHMP4AQ9BY43 222 aa15.18■□□□□ 0.02
RCL1-208ENST00000448872 ZBTB3Q9H5J0 574 aa15.18■□□□□ 0.02
RCL1-208ENST00000448872 LAMB4A4D0S4 1761 aa15.18■□□□□ 0.02
RCL1-208ENST00000448872 RFC4P35249 363 aa15.17■□□□□ 0.02
RCL1-208ENST00000448872 NOB1Q9ULX3 412 aaKnown RBP15.17■□□□□ 0.02
RCL1-208ENST00000448872 CAMTA2O94983 1202 aa15.16■□□□□ 0.02
RCL1-208ENST00000448872 HLFQ16534 295 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms