RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 PARP3Q9Y6F1 533 aa33.19■■■□□ 2.9
HTATSF1-203ENST00000448450 RTF1Q92541 710 aaKnown RBP33.18■■■□□ 2.9
HTATSF1-203ENST00000448450 PNNQ9H307 717 aaKnown RBP33.18■■■□□ 2.9
HTATSF1-203ENST00000448450 MCM10Q7L590 875 aa33.17■■■□□ 2.9
HTATSF1-203ENST00000448450 DCTN1Q14203 1278 aa33.16■■■□□ 2.9
HTATSF1-203ENST00000448450 MAPK8IP3Q9UPT6 1336 aa33.15■■■□□ 2.9
HTATSF1-203ENST00000448450 TJP1Q07157 1748 aa33.14■■■□□ 2.9
HTATSF1-203ENST00000448450 DPEP1P16444 411 aa33.14■■■□□ 2.9
HTATSF1-203ENST00000448450 ARHGAP27Q6ZUM4 889 aa33.14■■■□□ 2.9
HTATSF1-203ENST00000448450 ARFGEF1Q9Y6D6 1849 aa33.14■■■□□ 2.9
HTATSF1-203ENST00000448450 WDR43Q15061 677 aaKnown RBP eCLIP33.13■■■□□ 2.89
HTATSF1-203ENST00000448450 CEMIPQ8WUJ3 1361 aa33.12■■■□□ 2.89
HTATSF1-203ENST00000448450 CRKLP46109 303 aaKnown RBP33.12■■■□□ 2.89
HTATSF1-203ENST00000448450 NFE2L2Q16236 605 aa33.11■■■□□ 2.89
HTATSF1-203ENST00000448450 TTC5Q8N0Z6 440 aa33.11■■■□□ 2.89
HTATSF1-203ENST00000448450 HTATSF1O43719 755 aaKnown RBP33.1■■■□□ 2.89
HTATSF1-203ENST00000448450 DNAJC10Q8IXB1 793 aa33.09■■■□□ 2.89
HTATSF1-203ENST00000448450 CCDC146Q8IYE0 955 aa33.09■■■□□ 2.89
HTATSF1-203ENST00000448450 USP42Q9H9J4 1324 aaKnown RBP33.08■■■□□ 2.89
HTATSF1-203ENST00000448450 BTBD11A6QL63 1104 aa33.08■■■□□ 2.89
HTATSF1-203ENST00000448450 ADAMTS8Q9UP79 889 aa33.08■■■□□ 2.89
HTATSF1-203ENST00000448450 SIPA1L3O60292 1781 aaPredicted RBP33.08■■■□□ 2.89
HTATSF1-203ENST00000448450 DLG5Q8TDM6 1919 aa33.08■■■□□ 2.89
HTATSF1-203ENST00000448450 ZNF790Q6PG37 636 aa33.07■■■□□ 2.88
HTATSF1-203ENST00000448450 KCPQ6ZWJ8 1503 aa33.07■■■□□ 2.88
HTATSF1-203ENST00000448450 TOMM70O94826 608 aa33.06■■■□□ 2.88
HTATSF1-203ENST00000448450 SRP68Q9UHB9 627 aaKnown RBP33.06■■■□□ 2.88
HTATSF1-203ENST00000448450 ANP32CO43423 234 aa33.05■■■□□ 2.88
HTATSF1-203ENST00000448450 KCNQ3O43525 872 aa33.05■■■□□ 2.88
HTATSF1-203ENST00000448450 PIM2Q9P1W9 311 aa33.05■■■□□ 2.88
HTATSF1-203ENST00000448450 KCNA3P22001 575 aa33.04■■■□□ 2.88
HTATSF1-203ENST00000448450 APLP1P51693 650 aa33.04■■■□□ 2.88
HTATSF1-203ENST00000448450 ZNF496Q96IT1 587 aaPredicted RBP33.04■■■□□ 2.88
HTATSF1-203ENST00000448450 FKBP8Q14318 412 aa33.03■■■□□ 2.88
HTATSF1-203ENST00000448450 CCDC184Q52MB2 194 aa33.03■■■□□ 2.88
HTATSF1-203ENST00000448450 THUMPD2Q9BTF0 503 aaKnown RBP33.02■■■□□ 2.88
HTATSF1-203ENST00000448450 RIPK4P57078 832 aa33.01■■■□□ 2.87
HTATSF1-203ENST00000448450 DDR1Q08345 913 aa33.01■■■□□ 2.87
HTATSF1-203ENST00000448450 NMRK2Q9NPI5 230 aa33.01■■■□□ 2.87
HTATSF1-203ENST00000448450 TAF7Q15545 349 aaPredicted RBP33■■■□□ 2.87
HTATSF1-203ENST00000448450 DALRD3Q5D0E6 543 aaKnown RBP33■■■□□ 2.87
HTATSF1-203ENST00000448450 C9orf131Q5VYM1 1079 aa33■■■□□ 2.87
HTATSF1-203ENST00000448450 INTS5Q6P9B9 1019 aaKnown RBP33■■■□□ 2.87
HTATSF1-203ENST00000448450 VSIG10Q8N0Z9 540 aa33■■■□□ 2.87
HTATSF1-203ENST00000448450 MIS18AQ9NYP9 233 aa33■■■□□ 2.87
HTATSF1-203ENST00000448450 RRP7AQ9Y3A4 280 aaKnown RBP33■■■□□ 2.87
HTATSF1-203ENST00000448450 UBR2Q8IWV8 1755 aa33■■■□□ 2.87
HTATSF1-203ENST00000448450 CYP19A1P11511 503 aaPredicted RBP32.99■■■□□ 2.87
HTATSF1-203ENST00000448450 TMPOP42166 694 aaKnown RBP32.99■■■□□ 2.87
HTATSF1-203ENST00000448450 NEUROD2Q15784 382 aa32.99■■■□□ 2.87
HTATSF1-203ENST00000448450 RUNDC1Q96C34 613 aa32.99■■■□□ 2.87
HTATSF1-203ENST00000448450 FMNL2Q96PY5 1086 aa32.99■■■□□ 2.87
HTATSF1-203ENST00000448450 ZPR1O75312 459 aa32.97■■■□□ 2.87
HTATSF1-203ENST00000448450 HEG1Q9ULI3 1381 aa32.96■■■□□ 2.87
HTATSF1-203ENST00000448450 POLRMTO00411 1230 aaKnown RBP32.95■■■□□ 2.87
HTATSF1-203ENST00000448450 C16orf71Q8IYS4 520 aaPredicted RBP32.94■■■□□ 2.86
HTATSF1-203ENST00000448450 STARD3NLO95772 234 aa32.93■■■□□ 2.86
HTATSF1-203ENST00000448450 CHRNA5P30532 468 aa32.93■■■□□ 2.86
HTATSF1-203ENST00000448450 USPL1Q5W0Q7 1092 aa32.93■■■□□ 2.86
HTATSF1-203ENST00000448450 SOS1Q07889 1333 aaPredicted RBP32.93■■■□□ 2.86
HTATSF1-203ENST00000448450 TM4SF1P30408 202 aa32.92■■■□□ 2.86
HTATSF1-203ENST00000448450 RBM46Q8TBY0 533 aaKnown RBP32.92■■■□□ 2.86
HTATSF1-203ENST00000448450 RNF181Q9P0P0 153 aa32.92■■■□□ 2.86
HTATSF1-203ENST00000448450 ZBTB1Q9Y2K1 713 aa32.92■■■□□ 2.86
HTATSF1-203ENST00000448450 KDM2BQ8NHM5 1336 aa32.92■■■□□ 2.86
HTATSF1-203ENST00000448450 WDR90Q96KV7 1748 aa32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 CANXP27824 592 aaKnown RBP32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 TEX13AQ9BXU3 409 aaPredicted RBP32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 TNRC6CQ9HCJ0 1690 aaKnown RBP32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 AFDNP55196 1824 aaKnown RBP32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 SBF1O95248 1867 aa32.91■■■□□ 2.86
HTATSF1-203ENST00000448450 MRS2Q9HD23 443 aa32.9■■■□□ 2.86
HTATSF1-203ENST00000448450 COL15A1P39059 1388 aa32.89■■■□□ 2.86
HTATSF1-203ENST00000448450 PRAMEF22A3QJZ6 481 aa32.88■■■□□ 2.85
HTATSF1-203ENST00000448450 LMOD3Q0VAK6 560 aa32.88■■■□□ 2.85
HTATSF1-203ENST00000448450 PNISRQ8TF01 805 aaKnown RBP32.88■■■□□ 2.85
HTATSF1-203ENST00000448450 NRXN2Q9P2S2 1712 aa32.87■■■□□ 2.85
HTATSF1-203ENST00000448450 DLEC1Q9Y238 1755 aa32.86■■■□□ 2.85
HTATSF1-203ENST00000448450 NARFQ9UHQ1 456 aa32.86■■■□□ 2.85
HTATSF1-203ENST00000448450 USP16Q9Y5T5 823 aa32.86■■■□□ 2.85
HTATSF1-203ENST00000448450 A1BGP04217 495 aa32.85■■■□□ 2.85
HTATSF1-203ENST00000448450 SNRPA1P09661 255 aaKnown RBP32.85■■■□□ 2.85
HTATSF1-203ENST00000448450 DNAJC5GQ8N7S2 189 aa32.85■■■□□ 2.85
HTATSF1-203ENST00000448450 APAF1O14727 1248 aa32.84■■■□□ 2.85
HTATSF1-203ENST00000448450 TRIM35Q9UPQ4 493 aa32.84■■■□□ 2.85
HTATSF1-203ENST00000448450 FSTL1Q12841 308 aa32.83■■■□□ 2.85
HTATSF1-203ENST00000448450 NFIXQ14938 502 aa32.83■■■□□ 2.85
HTATSF1-203ENST00000448450 ZNF330Q9Y3S2 320 aaPredicted RBP32.82■■■□□ 2.84
HTATSF1-203ENST00000448450 TSPYL4Q9UJ04 414 aa32.81■■■□□ 2.84
HTATSF1-203ENST00000448450 ZC3H4Q9UPT8 1303 aaKnown RBP32.8■■■□□ 2.84
HTATSF1-203ENST00000448450 KDM3BQ7LBC6 1761 aa32.79■■■□□ 2.84
HTATSF1-203ENST00000448450 PIP4K2AP48426 406 aaPredicted RBP32.79■■■□□ 2.84
HTATSF1-203ENST00000448450 EIF5P55010 431 aaKnown RBP32.79■■■□□ 2.84
HTATSF1-203ENST00000448450 EIF4A1P60842 406 aaKnown RBP32.79■■■□□ 2.84
HTATSF1-203ENST00000448450 RRAGCQ9HB90 399 aa32.78■■■□□ 2.84
HTATSF1-203ENST00000448450 LAS1LQ9Y4W2 734 aaKnown RBP32.78■■■□□ 2.84
HTATSF1-203ENST00000448450 SERPINB2P05120 415 aa32.77■■■□□ 2.84
HTATSF1-203ENST00000448450 RASSF7Q02833 373 aa32.76■■■□□ 2.83
HTATSF1-203ENST00000448450 BCL2L12Q9HB09 334 aa32.76■■■□□ 2.83
HTATSF1-203ENST00000448450 TIAM2Q8IVF5 1701 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms