RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 ABCA9Q8IUA7 1624 aa12.47□□□□□ -0.41
SMARCE1-206ENST00000447024 GPR37L1O60883 481 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 FOXK2Q01167 660 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 NEUROD2Q15784 382 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 OSBPL3Q9H4L5 887 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 HECW1Q76N89 1606 aa12.46□□□□□ -0.41
SMARCE1-206ENST00000447024 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
SMARCE1-206ENST00000447024 TRAK2O60296 914 aa12.45□□□□□ -0.42
SMARCE1-206ENST00000447024 ZNF592Q92610 1267 aa12.44□□□□□ -0.42
SMARCE1-206ENST00000447024 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
SMARCE1-206ENST00000447024 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-206ENST00000447024 CLIP1P30622 1438 aa12.44□□□□□ -0.42
SMARCE1-206ENST00000447024 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
SMARCE1-206ENST00000447024 BCRP11274 1271 aa12.43□□□□□ -0.42
SMARCE1-206ENST00000447024 ACDQ96AP0 544 aa12.43□□□□□ -0.42
SMARCE1-206ENST00000447024 NEO1Q92859 1461 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 WDR44Q5JSH3 913 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 TIMMDC1Q9NPL8 285 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 RAB6BQ9NRW1 208 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 ARAP3Q8WWN8 1544 aa12.42□□□□□ -0.42
SMARCE1-206ENST00000447024 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
SMARCE1-206ENST00000447024 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
SMARCE1-206ENST00000447024 TAS1R3Q7RTX0 852 aa12.41□□□□□ -0.42
SMARCE1-206ENST00000447024 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
SMARCE1-206ENST00000447024 NDUFB9Q9Y6M9 179 aa12.41□□□□□ -0.42
SMARCE1-206ENST00000447024 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
SMARCE1-206ENST00000447024 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
SMARCE1-206ENST00000447024 NUCKS1Q9H1E3 243 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-206ENST00000447024 ESF1Q9H501 851 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-206ENST00000447024 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.43
SMARCE1-206ENST00000447024 SOCS7O14512 581 aa12.39□□□□□ -0.43
SMARCE1-206ENST00000447024 F11P03951 625 aa12.39□□□□□ -0.43
SMARCE1-206ENST00000447024 MX2P20592 715 aa12.39□□□□□ -0.43
SMARCE1-206ENST00000447024 BANK1Q8NDB2 785 aa12.39□□□□□ -0.43
SMARCE1-206ENST00000447024 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
SMARCE1-206ENST00000447024 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-206ENST00000447024 TROQ12816 1431 aaPredicted RBP12.37□□□□□ -0.43
SMARCE1-206ENST00000447024 IL2RAP01589 272 aa12.37□□□□□ -0.43
SMARCE1-206ENST00000447024 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
SMARCE1-206ENST00000447024 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
SMARCE1-206ENST00000447024 CFAP74Q9C0B2 1584 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 GNRH1P01148 92 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 THBS1P07996 1170 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 PLA2G4EQ3MJ16 856 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 BEND7Q8N7W2 519 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 ESYT1Q9BSJ8 1104 aa12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCE1-206ENST00000447024 GPAMQ9HCL2 828 aa12.35□□□□□ -0.43
SMARCE1-206ENST00000447024 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
SMARCE1-206ENST00000447024 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
SMARCE1-206ENST00000447024 CENPCQ03188 943 aa12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 PLCH2O75038 1416 aa12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 PCF11O94913 1555 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-206ENST00000447024 PHKA2P46019 1235 aa12.33□□□□□ -0.44
SMARCE1-206ENST00000447024 HRH3Q9Y5N1 445 aa12.33□□□□□ -0.44
SMARCE1-206ENST00000447024 FANCAO15360 1455 aa12.33□□□□□ -0.44
SMARCE1-206ENST00000447024 KIF14Q15058 1648 aa12.33□□□□□ -0.44
SMARCE1-206ENST00000447024 AKNAQ7Z591 1439 aa12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 OIP5O43482 229 aa12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 MYCP01106 439 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 ITGB2P05107 769 aa12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 ZSCAN10Q96SZ4 725 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
SMARCE1-206ENST00000447024 TTC37Q6PGP7 1564 aa12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 APBB1O00213 710 aa12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 MAP2K3P46734 347 aa12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 EFCAB2Q5VUJ9 269 aa12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 OXCT2Q9BYC2 517 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 DENND4BO75064 1496 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-206ENST00000447024 A0A1B0GTH6 734 aa12.3□□□□□ -0.44
SMARCE1-206ENST00000447024 MSTNO14793 375 aa12.3□□□□□ -0.44
SMARCE1-206ENST00000447024 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-206ENST00000447024 LRRIQ1Q96JM4 1722 aa12.3□□□□□ -0.44
SMARCE1-206ENST00000447024 XAGE2Q96GT9 111 aa12.29□□□□□ -0.44
SMARCE1-206ENST00000447024 SPOCK3Q9BQ16 436 aa12.29□□□□□ -0.44
SMARCE1-206ENST00000447024 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
SMARCE1-206ENST00000447024 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
SMARCE1-206ENST00000447024 UBAP2LQ14157 1087 aaKnown RBP12.27□□□□□ -0.45
SMARCE1-206ENST00000447024 C4orf17Q53FE4 359 aa12.27□□□□□ -0.45
SMARCE1-206ENST00000447024 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
SMARCE1-206ENST00000447024 PHF24Q9UPV7 400 aa12.27□□□□□ -0.45
SMARCE1-206ENST00000447024 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
SMARCE1-206ENST00000447024 SNRPNP63162 240 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-206ENST00000447024 TMEM214Q6NUQ4 689 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-206ENST00000447024 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 SHISA8B8ZZ34 492 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 LBRQ14739 615 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms