RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
VPS8-210ENST00000446204 IL13P35225 146 aa9.44□□□□□ -0.9
VPS8-210ENST00000446204 LARP1Q6PKG0 1096 aaKnown RBP9.44□□□□□ -0.9
VPS8-210ENST00000446204 PI4KAP2A4QPH2 592 aa9.44□□□□□ -0.9
VPS8-210ENST00000446204 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
VPS8-210ENST00000446204 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
VPS8-210ENST00000446204 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
VPS8-210ENST00000446204 ATF3P18847 181 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 TTC39AQ5SRH9 613 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 OTUD7AQ8TE49 926 aaPredicted RBP9.43□□□□□ -0.9
VPS8-210ENST00000446204 TBC1D2BQ9UPU7 963 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 IPO7O95373 1038 aaKnown RBP9.43□□□□□ -0.9
VPS8-210ENST00000446204 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 ANTXR1Q9H6X2 564 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 SERPINC1P01008 464 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 CNPY2Q9Y2B0 182 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 CHMLP26374 656 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 ZNF445P59923 1031 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
VPS8-210ENST00000446204 GIMAP6Q6P9H5 292 aa9.43□□□□□ -0.9
VPS8-210ENST00000446204 TTC37Q6PGP7 1564 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 CABP4P57796 275 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 MPRIPQ6WCQ1 1025 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 HYPKQ9NX55 129 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
VPS8-210ENST00000446204 TRPM2O94759 1503 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 MSH6P52701 1360 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 TTC21AQ8NDW8 1320 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 KDM4AO75164 1064 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 PLEKHF1Q96S99 279 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 RIMS2Q9UQ26 1411 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 SART3Q15020 963 aaKnown RBP9.42□□□□□ -0.9
VPS8-210ENST00000446204 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.42□□□□□ -0.92e-6■■■■□ 21.9
VPS8-210ENST00000446204 PLXNC1O60486 1568 aa9.42□□□□□ -0.9
VPS8-210ENST00000446204 XBP1P17861 261 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 FKBP4Q02790 459 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS8-210ENST00000446204 CCDC70Q6NSX1 233 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 ANO10Q9NW15 660 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CEP126Q9P2H0 1117 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 MAP3K2Q9Y2U5 619 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CCDC66A2RUB6 948 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CTAGE5O15320 804 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CLIP2Q9UDT6 1046 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
VPS8-210ENST00000446204 ABCC4O15439 1325 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 F13A1P00488 732 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 HMGB1P09429 215 aaKnown RBP9.41□□□□□ -0.9
VPS8-210ENST00000446204 NOLC1Q14978 699 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS8-210ENST00000446204 TRPM1Q7Z4N2 1603 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CHL1O00533 1208 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 PTPN14Q15678 1187 aa9.41□□□□□ -0.9
VPS8-210ENST00000446204 CCDC47Q96A33 483 aaKnown RBP9.41□□□□□ -0.9
VPS8-210ENST00000446204 ZNF830Q96NB3 372 aaPredicted RBP9.41□□□□□ -0.9
VPS8-210ENST00000446204 FSD2A1L4K1 749 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 SMTNL1A8MU46 457 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 ATP2B1P20020 1258 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 CCDC57Q2TAC2 916 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 MYD88Q99836 296 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
VPS8-210ENST00000446204 MYOM2P54296 1465 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 CBFA2T2O43439 604 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 FOXO3O43524 673 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 ZNF165P49910 485 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 LMBRD1Q9NUN5 540 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 KIF24Q5T7B8 1368 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 KIF2AO00139 706 aaPredicted RBP9.4□□□□□ -0.9
VPS8-210ENST00000446204 TNNT1P13805 278 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
VPS8-210ENST00000446204 NECAB1Q8N987 351 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 NOC3LQ8WTT2 800 aaKnown RBP9.4□□□□□ -0.9
VPS8-210ENST00000446204 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
VPS8-210ENST00000446204 BRMS1Q9HCU9 246 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 HMG20BQ9P0W2 317 aa9.4□□□□□ -0.9
VPS8-210ENST00000446204 USP19O94966 1318 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.91
VPS8-210ENST00000446204 MYO5CQ9NQX4 1742 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 CAVIN2O95810 425 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 ANXA1P04083 346 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 CBX1P83916 185 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 VPS37DQ86XT2 251 aa9.4□□□□□ -0.91
VPS8-210ENST00000446204 SOS1Q07889 1333 aaPredicted RBP9.39□□□□□ -0.91
VPS8-210ENST00000446204 PREX2Q70Z35 1606 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 CDKL5O76039 1030 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 GSPT1P15170 499 aaKnown RBP9.39□□□□□ -0.91
VPS8-210ENST00000446204 AK2P54819 239 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 G2E3Q7L622 706 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 CHPF2Q9P2E5 772 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 MARCH6O60337 910 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 NEMFO60524 1076 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 IMMTQ16891 758 aaKnown RBP9.39□□□□□ -0.91
VPS8-210ENST00000446204 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
VPS8-210ENST00000446204 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
VPS8-210ENST00000446204 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
VPS8-210ENST00000446204 FLT4P35916 1363 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms