RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ABCA10Q8WWZ4 1543 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 UBA5Q9GZZ9 404 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 GRIN2AQ12879 1464 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 ZPR1O75312 459 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
RIF1-205ENST00000444746 FILIP1LQ4L180 1135 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 COPS6Q7L5N1 327 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 MCM2P49736 904 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
RIF1-205ENST00000444746 G2E3Q7L622 706 aa9.4□□□□□ -0.91
RIF1-205ENST00000444746 DEF6Q9H4E7 631 aa9.4□□□□□ -0.91
RIF1-205ENST00000444746 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.91
RIF1-205ENST00000444746 SDSP20132 328 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 PDCP20941 246 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 GPS2Q13227 327 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 LRPPRCP42704 1394 aaKnown RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 RXRAP19793 462 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 TXLNAP40222 546 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 CENPHQ9H3R5 247 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 NDUFB9Q9Y6M9 179 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 GLRX3O76003 335 aaKnown RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 PPFIBP1Q86W92 1011 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 NAPBQ9H115 298 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 ANKRD1Q15327 319 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 GOLGA8AA7E2F4 631 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 GOLGA8BA8MQT2 603 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 TNNT1P13805 278 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 DZIP1Q86YF9 867 aaKnown RBP9.39□□□□□ -0.91
RIF1-205ENST00000444746 PDCL3Q9H2J4 239 aa9.39□□□□□ -0.91
RIF1-205ENST00000444746 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
RIF1-205ENST00000444746 MICU3Q86XE3 530 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 ZNF213O14771 459 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 CCDC96Q2M329 555 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 CFAP100Q494V2 611 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
RIF1-205ENST00000444746 EXOC5O00471 708 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 TTC21BQ7Z4L5 1316 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 ERICH4A6NGS2 130 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
RIF1-205ENST00000444746 ZSCAN25Q6NSZ9 544 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 CRACR2BQ8N4Y2 399 aaPredicted RBP9.38□□□□□ -0.91
RIF1-205ENST00000444746 ZNF622Q969S3 477 aaKnown RBP eCLIP9.38□□□□□ -0.914e-7■■□□□ 12
RIF1-205ENST00000444746 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 POLKQ9UBT6 870 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 FAM170AA1A519 330 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 FANCAO15360 1455 aa9.38□□□□□ -0.91
RIF1-205ENST00000444746 DBF4Q9UBU7 674 aaPredicted RBP9.37□□□□□ -0.91
RIF1-205ENST00000444746 CNPY2Q9Y2B0 182 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
RIF1-205ENST00000444746 AXDND1Q5T1B0 1012 aaPredicted RBP9.37□□□□□ -0.91
RIF1-205ENST00000444746 PPP6R1Q9UPN7 881 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 CAVIN4Q5BKX8 364 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 PLEKHH1Q9ULM0 1364 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 BRF1Q92994 677 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 UIMC1Q96RL1 719 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 NOL7Q9UMY1 257 aaKnown RBP9.37□□□□□ -0.91
RIF1-205ENST00000444746 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
RIF1-205ENST00000444746 MAP3K11Q16584 847 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 WDR78Q5VTH9 848 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 MMRN2Q9H8L6 949 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 LMBR1LQ6UX01 489 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 C8orf76Q96K31 380 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 SCAF11Q99590 1463 aaKnown RBP9.36□□□□□ -0.91
RIF1-205ENST00000444746 TRAPPC8Q9Y2L5 1435 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 IFNL2Q8IZJ0 200 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 SLC26A6Q9BXS9 759 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 ARGLU1Q9NWB6 273 aaPredicted RBP9.36□□□□□ -0.91
RIF1-205ENST00000444746 SLC12A7Q9Y666 1083 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 SSR1P43307 286 aaKnown RBP9.36□□□□□ -0.91
RIF1-205ENST00000444746 TEX35Q5T0J7 233 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 SPTY2D1Q68D10 685 aaPredicted RBP9.36□□□□□ -0.91
RIF1-205ENST00000444746 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 MIGA1Q8NAN2 632 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 SMARCE1Q969G3 411 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 PICALMQ13492 652 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 C8orf37Q96NL8 207 aa9.36□□□□□ -0.91
RIF1-205ENST00000444746 ZGPATQ8N5A5 531 aaKnown RBP9.35□□□□□ -0.91
RIF1-205ENST00000444746 PPIP5K1Q6PFW1 1433 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 NLRP5P59047 1200 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 CBX1P83916 185 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 ECHDC1Q9NTX5 307 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 MAPKBP1O60336 1514 aa9.35□□□□□ -0.91
RIF1-205ENST00000444746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.35□□□□□ -0.91
RIF1-205ENST00000444746 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms