RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 NR1I2O75469 434 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 RAPGEF3O95398 923 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 DSG2Q14126 1118 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 ERP27Q96DN0 273 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 LRRC27Q9C0I9 530 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 ALDH8A1Q9H2A2 487 aaPredicted RBP4.97□□□□□ -1.61
UBR3-206ENST00000444475 SRA1Q9HD15 236 aaKnown RBP4.97□□□□□ -1.61
UBR3-206ENST00000444475 PPP2R3BQ9Y5P8 575 aa4.97□□□□□ -1.61
UBR3-206ENST00000444475 KCNQ2O43526 872 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 IGHA2P01877 340 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 GJA8P48165 433 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 NEXNQ0ZGT2 675 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 ZRSR2Q15696 482 aaKnown RBP4.96□□□□□ -1.61
UBR3-206ENST00000444475 SLFNL1Q499Z3 407 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 BRDTQ58F21 947 aaPredicted RBP4.96□□□□□ -1.61
UBR3-206ENST00000444475 ERAP2Q6P179 960 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 FERMT3Q86UX7 667 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 RNF135Q8IUD6 432 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 IFNL3Q8IZI9 196 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 PRPF38AQ8NAV1 312 aaKnown RBP4.96□□□□□ -1.61
UBR3-206ENST00000444475 FRS2Q8WU20 508 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 AGBL1Q96MI9 1066 aa4.96□□□□□ -1.61
UBR3-206ENST00000444475 ATP1B4Q9UN42 357 aaPredicted RBP4.96□□□□□ -1.61
UBR3-206ENST00000444475 DKK1O94907 266 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 ZNF76P36508 570 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 SEC13P55735 322 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 SWI5Q1ZZU3 235 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.96□□□□□ -1.62
UBR3-206ENST00000444475 METTL3Q86U44 580 aaKnown RBP4.96□□□□□ -1.62
UBR3-206ENST00000444475 PARP2Q9UGN5 583 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 MASP1P48740 699 aa4.96□□□□□ -1.62
UBR3-206ENST00000444475 ZNF211Q13398 564 aaPredicted RBP4.96□□□□□ -1.62
UBR3-206ENST00000444475 ZSCAN29Q8IWY8 852 aaPredicted RBP4.96□□□□□ -1.62
UBR3-206ENST00000444475 PIK3CDO00329 1044 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 TREHO43280 583 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 HIP1RO75146 1068 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 CDC27P30260 824 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 TDO2P48775 406 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 RASA3Q14644 834 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ZSCAN30Q86W11 494 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ZNF579Q8NAF0 562 aaKnown RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 FBXO41Q8TF61 875 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 NOL7Q9UMY1 257 aaKnown RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 USP17L3A6NCW0 530 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 USP17L4A6NCW7 530 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 SLC4A3P48751 1232 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 DSC3Q14574 896 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ARSHQ5FYA8 562 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 C10orf62Q5T681 223 aaPredicted RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 USP17L2Q6R6M4 530 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 USP17L1Q7RTZ2 530 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 FAM126AQ9BYI3 521 aaPredicted RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 AS3MTQ9HBK9 375 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 PTPRHQ9HD43 1115 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 MRPS23Q9Y3D9 190 aaKnown RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 EMILIN1Q9Y6C2 1016 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 CT47B1P0C2W7 299 aaPredicted RBP4.95□□□□□ -1.62
UBR3-206ENST00000444475 TMC7Q7Z402 723 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ZHX3Q9H4I2 956 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ACAD8Q9UKU7 415 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 ASAP1Q9ULH1 1129 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 HDAC5Q9UQL6 1122 aa4.95□□□□□ -1.62
UBR3-206ENST00000444475 MORC3Q14149 939 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 HLTFQ14527 1009 aaKnown RBP eCLIP4.94□□□□□ -1.62
UBR3-206ENST00000444475 DNAJC25Q9H1X3 360 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 HOMER2Q9NSB8 354 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 PRSS47A8MTI9 375 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 ATF4P18848 351 aaPredicted RBP4.94□□□□□ -1.62
UBR3-206ENST00000444475 CLK1P49759 484 aaKnown RBP4.94□□□□□ -1.62
UBR3-206ENST00000444475 ZNF394Q53GI3 561 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 KIAA1958Q8N8K9 716 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 PGAP2Q9UHJ9 254 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 POLG2Q9UHN1 485 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 RBP3P10745 1247 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 GPSM2P81274 684 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 NYAP1Q6ZVC0 841 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 KRT26Q7Z3Y9 468 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 NLRP7Q8WX94 980 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 RBCK1Q9BYM8 510 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 ABCF2Q9UG63 623 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 INPP5FQ9Y2H2 1132 aa4.94□□□□□ -1.62
UBR3-206ENST00000444475 C16orf54Q6UWD8 224 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 PPP1R12AO14974 1030 aaPredicted RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 PLIN1O60240 522 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 PRPF40AO75400 957 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 MTA2O94776 668 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 MYL1P05976 194 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 TSPAN7P41732 249 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 PTPN12Q05209 780 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 LRRC41Q15345 812 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 JAMLQ86YT9 394 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 NGRNQ9NPE2 291 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 PCDHB15Q9Y5E8 787 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 DCAF8L1A6NGE4 600 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 TERF1P54274 439 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 UVSSAQ2YD98 709 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 RC3H1Q5TC82 1133 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 LARP1BQ659C4 914 aaKnown RBP4.93□□□□□ -1.62
UBR3-206ENST00000444475 NKAIN3Q8N8D7 197 aa4.93□□□□□ -1.62
UBR3-206ENST00000444475 CABP2Q9NPB3 220 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms