RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 N4BP2Q86UW6 1770 aaPredicted RBP31.62■■■□□ 2.65
TMEM238-201ENST00000444469 IL17REQ8NFR9 667 aa31.62■■■□□ 2.65
TMEM238-201ENST00000444469 TEX13AQ9BXU3 409 aaPredicted RBP31.62■■■□□ 2.65
TMEM238-201ENST00000444469 RSPH6AQ9H0K4 717 aa31.62■■■□□ 2.65
TMEM238-201ENST00000444469 ZNF790Q6PG37 636 aa31.61■■■□□ 2.65
TMEM238-201ENST00000444469 ZNF526Q8TF50 670 aaPredicted RBP31.61■■■□□ 2.65
TMEM238-201ENST00000444469 RTF1Q92541 710 aaKnown RBP31.61■■■□□ 2.65
TMEM238-201ENST00000444469 NARFQ9UHQ1 456 aa31.61■■■□□ 2.65
TMEM238-201ENST00000444469 DDR1Q08345 913 aa31.6■■■□□ 2.65
TMEM238-201ENST00000444469 NPM2Q86SE8 214 aaKnown RBP31.6■■■□□ 2.65
TMEM238-201ENST00000444469 PHACTR3Q96KR7 559 aa31.59■■■□□ 2.65
TMEM238-201ENST00000444469 A0A087WZG4 1122 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 NEFMP07197 916 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 ARHGAP27Q6ZUM4 889 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 ZNF496Q96IT1 587 aaPredicted RBP31.58■■■□□ 2.65
TMEM238-201ENST00000444469 FMNL2Q96PY5 1086 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 PIM2Q9P1W9 311 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 UBR2Q8IWV8 1755 aa31.58■■■□□ 2.65
TMEM238-201ENST00000444469 ADCY9O60503 1353 aa31.57■■■□□ 2.64
TMEM238-201ENST00000444469 HEG1Q9ULI3 1381 aa31.57■■■□□ 2.64
TMEM238-201ENST00000444469 POLRMTO00411 1230 aaKnown RBP31.57■■■□□ 2.64
TMEM238-201ENST00000444469 KIAA1551Q9HCM1 1747 aa31.57■■■□□ 2.64
TMEM238-201ENST00000444469 BTBD11A6QL63 1104 aa31.56■■■□□ 2.64
TMEM238-201ENST00000444469 TM4SF1P30408 202 aa31.56■■■□□ 2.64
TMEM238-201ENST00000444469 ZNF330Q9Y3S2 320 aaPredicted RBP31.55■■■□□ 2.64
TMEM238-201ENST00000444469 DALRD3Q5D0E6 543 aaKnown RBP31.54■■■□□ 2.64
TMEM238-201ENST00000444469 CEMIPQ8WUJ3 1361 aa31.53■■■□□ 2.64
TMEM238-201ENST00000444469 NFIXQ14938 502 aa31.52■■■□□ 2.64
TMEM238-201ENST00000444469 SIPA1L3O60292 1781 aaPredicted RBP31.5■■■□□ 2.63
TMEM238-201ENST00000444469 KCNA3P22001 575 aa31.49■■■□□ 2.63
TMEM238-201ENST00000444469 CHRNA5P30532 468 aa31.49■■■□□ 2.63
TMEM238-201ENST00000444469 EIF5P55010 431 aaKnown RBP31.49■■■□□ 2.63
TMEM238-201ENST00000444469 SERPINB2P05120 415 aa31.48■■■□□ 2.63
TMEM238-201ENST00000444469 BICDL1Q6ZP65 573 aa31.48■■■□□ 2.63
TMEM238-201ENST00000444469 IL6STP40189 918 aaPredicted RBP31.47■■■□□ 2.63
TMEM238-201ENST00000444469 MCM10Q7L590 875 aa31.47■■■□□ 2.63
TMEM238-201ENST00000444469 HTATSF1O43719 755 aaKnown RBP31.45■■■□□ 2.63
TMEM238-201ENST00000444469 BCL2L12Q9HB09 334 aa31.45■■■□□ 2.63
TMEM238-201ENST00000444469 BRCA1P38398 1863 aaKnown RBP31.44■■■□□ 2.62
TMEM238-201ENST00000444469 TBC1D2BQ9UPU7 963 aa31.43■■■□□ 2.62
TMEM238-201ENST00000444469 NPHP1O15259 732 aa31.42■■■□□ 2.62
TMEM238-201ENST00000444469 KCNQ3O43525 872 aa31.42■■■□□ 2.62
TMEM238-201ENST00000444469 A1BGP04217 495 aa31.42■■■□□ 2.62
TMEM238-201ENST00000444469 ARFGEF1Q9Y6D6 1849 aa31.41■■■□□ 2.62
TMEM238-201ENST00000444469 PNNQ9H307 717 aaKnown RBP31.41■■■□□ 2.62
TMEM238-201ENST00000444469 SNRPA1P09661 255 aaKnown RBP31.4■■■□□ 2.62
TMEM238-201ENST00000444469 DCTN1Q14203 1278 aa31.4■■■□□ 2.62
TMEM238-201ENST00000444469 H0YIN7 160 aa31.39■■■□□ 2.62
TMEM238-201ENST00000444469 C9orf131Q5VYM1 1079 aa31.39■■■□□ 2.62
TMEM238-201ENST00000444469 AFDNP55196 1824 aaKnown RBP31.38■■■□□ 2.61
TMEM238-201ENST00000444469 TBC1D9BQ66K14 1250 aa31.38■■■□□ 2.61
TMEM238-201ENST00000444469 C2CD5Q86YS7 1000 aa31.38■■■□□ 2.61
TMEM238-201ENST00000444469 DZIP3Q86Y13 1208 aaKnown RBP31.37■■■□□ 2.61
TMEM238-201ENST00000444469 MAPK8IP3Q9UPT6 1336 aa31.37■■■□□ 2.61
TMEM238-201ENST00000444469 CARMIL3Q8ND23 1372 aa31.37■■■□□ 2.61
TMEM238-201ENST00000444469 NRXN2Q9P2S2 1712 aa31.37■■■□□ 2.61
TMEM238-201ENST00000444469 SCN7AQ01118 1682 aa31.36■■■□□ 2.61
TMEM238-201ENST00000444469 TAF7Q15545 349 aaPredicted RBP31.36■■■□□ 2.61
TMEM238-201ENST00000444469 SETDB2Q96T68 719 aa31.36■■■□□ 2.61
TMEM238-201ENST00000444469 RNF181Q9P0P0 153 aa31.36■■■□□ 2.61
TMEM238-201ENST00000444469 USP16Q9Y5T5 823 aa31.36■■■□□ 2.61
TMEM238-201ENST00000444469 TTLL6Q8N841 843 aa31.35■■■□□ 2.61
TMEM238-201ENST00000444469 PDZRN3Q9UPQ7 1066 aa31.35■■■□□ 2.61
TMEM238-201ENST00000444469 PDE6BP35913 854 aa31.34■■■□□ 2.61
TMEM238-201ENST00000444469 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
TMEM238-201ENST00000444469 ZNF652Q9Y2D9 606 aa31.33■■■□□ 2.61
TMEM238-201ENST00000444469 KIF3CO14782 793 aa31.31■■■□□ 2.6
TMEM238-201ENST00000444469 CAMTA2O94983 1202 aa31.31■■■□□ 2.6
TMEM238-201ENST00000444469 PIP4K2AP48426 406 aaPredicted RBP31.31■■■□□ 2.6
TMEM238-201ENST00000444469 ST5P78524 1137 aa31.31■■■□□ 2.6
TMEM238-201ENST00000444469 CNBD1Q8NA66 436 aa31.31■■■□□ 2.6
TMEM238-201ENST00000444469 BRIP1Q9BX63 1249 aa31.31■■■□□ 2.6
TMEM238-201ENST00000444469 KDM2BQ8NHM5 1336 aa31.3■■■□□ 2.6
TMEM238-201ENST00000444469 PRAMEF22A3QJZ6 481 aa31.3■■■□□ 2.6
TMEM238-201ENST00000444469 ZNF622Q969S3 477 aaKnown RBP eCLIP31.3■■■□□ 2.6
TMEM238-201ENST00000444469 RALBP1Q15311 655 aa31.29■■■□□ 2.6
TMEM238-201ENST00000444469 NFE2L2Q16236 605 aa31.29■■■□□ 2.6
TMEM238-201ENST00000444469 PRR5LQ6MZQ0 368 aa31.29■■■□□ 2.6
TMEM238-201ENST00000444469 C16orf71Q8IYS4 520 aaPredicted RBP31.29■■■□□ 2.6
TMEM238-201ENST00000444469 HSPA6P17066 643 aa31.27■■■□□ 2.6
TMEM238-201ENST00000444469 MIS18AQ9NYP9 233 aa31.27■■■□□ 2.6
TMEM238-201ENST00000444469 DLEC1Q9Y238 1755 aa31.26■■■□□ 2.59
TMEM238-201ENST00000444469 RASSF7Q02833 373 aa31.25■■■□□ 2.59
TMEM238-201ENST00000444469 CLEC4GQ6UXB4 293 aa31.25■■■□□ 2.59
TMEM238-201ENST00000444469 CCDC24Q8N4L8 307 aa31.25■■■□□ 2.59
TMEM238-201ENST00000444469 PLEKHF1Q96S99 279 aa31.25■■■□□ 2.59
TMEM238-201ENST00000444469 NMRK2Q9NPI5 230 aa31.25■■■□□ 2.59
TMEM238-201ENST00000444469 TOMM70O94826 608 aa31.24■■■□□ 2.59
TMEM238-201ENST00000444469 NBPF5PQ86XG9 351 aaPredicted RBP31.24■■■□□ 2.59
TMEM238-201ENST00000444469 BCORQ6W2J9 1755 aa31.23■■■□□ 2.59
TMEM238-201ENST00000444469 LMNB1P20700 586 aa31.23■■■□□ 2.59
TMEM238-201ENST00000444469 DDX10Q13206 875 aaKnown RBP31.21■■■□□ 2.59
TMEM238-201ENST00000444469 ZC3H4Q9UPT8 1303 aaKnown RBP31.21■■■□□ 2.59
TMEM238-201ENST00000444469 ZNF219Q9P2Y4 722 aaPredicted RBP31.2■■■□□ 2.59
TMEM238-201ENST00000444469 DLG5Q8TDM6 1919 aa31.2■■■□□ 2.58
TMEM238-201ENST00000444469 NBPF26B4DH59 902 aa31.19■■■□□ 2.58
TMEM238-201ENST00000444469 NBPF10Q6P3W6 841 aaKnown RBP31.19■■■□□ 2.58
TMEM238-201ENST00000444469 NBPF15Q8N660 670 aa31.19■■■□□ 2.58
TMEM238-201ENST00000444469 CNKSR1Q969H4 720 aa31.19■■■□□ 2.58
TMEM238-201ENST00000444469 RGL2O15211 777 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms