RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 COL15A1P39059 1388 aa28.09■■■□□ 2.09
HNF4A-205ENST00000443598 KIF13BQ9NQT8 1826 aa28.08■■■□□ 2.09
HNF4A-205ENST00000443598 ZNF316A6NFI3 1004 aaPredicted RBP28.08■■■□□ 2.09
HNF4A-205ENST00000443598 ZPR1O75312 459 aa28.08■■■□□ 2.09
HNF4A-205ENST00000443598 SRP68Q9UHB9 627 aaKnown RBP28.08■■■□□ 2.09
HNF4A-205ENST00000443598 GPR162Q16538 588 aa28.07■■■□□ 2.08
HNF4A-205ENST00000443598 PNISRQ8TF01 805 aaKnown RBP28.07■■■□□ 2.08
HNF4A-205ENST00000443598 CHD4Q14839 1912 aa28.07■■■□□ 2.08
HNF4A-205ENST00000443598 WDR43Q15061 677 aaKnown RBP eCLIP28.07■■■□□ 2.083e-15■■□□□ 11.4
HNF4A-205ENST00000443598 NARFQ9UHQ1 456 aa28.07■■■□□ 2.08
HNF4A-205ENST00000443598 EIF5P55010 431 aaKnown RBP28.06■■■□□ 2.08
HNF4A-205ENST00000443598 PARP3Q9Y6F1 533 aa28.06■■■□□ 2.08
HNF4A-205ENST00000443598 CANXP27824 592 aaKnown RBP28.05■■■□□ 2.08
HNF4A-205ENST00000443598 A0A087WZG4 1122 aa28.04■■■□□ 2.08
HNF4A-205ENST00000443598 SNRPA1P09661 255 aaKnown RBP28.04■■■□□ 2.08
HNF4A-205ENST00000443598 FKBP8Q14318 412 aa28.04■■■□□ 2.08
HNF4A-205ENST00000443598 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
HNF4A-205ENST00000443598 IL6STP40189 918 aaPredicted RBP28.03■■■□□ 2.08
HNF4A-205ENST00000443598 RIPK4P57078 832 aa28.03■■■□□ 2.08
HNF4A-205ENST00000443598 USPL1Q5W0Q7 1092 aa28.03■■■□□ 2.08
HNF4A-205ENST00000443598 YY1P25490 414 aa28.02■■■□□ 2.08
HNF4A-205ENST00000443598 TMPOP42166 694 aaKnown RBP28.02■■■□□ 2.08
HNF4A-205ENST00000443598 LMOD3Q0VAK6 560 aa28.02■■■□□ 2.08
HNF4A-205ENST00000443598 UTRNP46939 3433 aa28.02■■■□□ 2.08
HNF4A-205ENST00000443598 C10orf71Q711Q0 1435 aa28.01■■■□□ 2.07
HNF4A-205ENST00000443598 TM4SF1P30408 202 aa28■■■□□ 2.07
HNF4A-205ENST00000443598 RUNDC1Q96C34 613 aa28■■■□□ 2.07
HNF4A-205ENST00000443598 USP16Q9Y5T5 823 aa28■■■□□ 2.07
HNF4A-205ENST00000443598 PELP1Q8IZL8 1130 aaKnown RBP28■■■□□ 2.07
HNF4A-205ENST00000443598 ADAMTS8Q9UP79 889 aa28■■■□□ 2.07
HNF4A-205ENST00000443598 GRIN3BO60391 1043 aa27.99■■■□□ 2.07
HNF4A-205ENST00000443598 A1BGP04217 495 aa27.99■■■□□ 2.07
HNF4A-205ENST00000443598 TGFB2P61812 414 aa27.99■■■□□ 2.07
HNF4A-205ENST00000443598 MIS18AQ9NYP9 233 aa27.99■■■□□ 2.07
HNF4A-205ENST00000443598 THUMPD2Q9BTF0 503 aaKnown RBP27.98■■■□□ 2.07
HNF4A-205ENST00000443598 DDR1Q08345 913 aa27.97■■■□□ 2.07
HNF4A-205ENST00000443598 NPM2Q86SE8 214 aaKnown RBP27.97■■■□□ 2.07
HNF4A-205ENST00000443598 CCDC146Q8IYE0 955 aa27.97■■■□□ 2.07
HNF4A-205ENST00000443598 KIAA1551Q9HCM1 1747 aa27.97■■■□□ 2.07
HNF4A-205ENST00000443598 GOLGB1Q14789 3259 aaKnown RBP27.97■■■□□ 2.07
HNF4A-205ENST00000443598 YBX3P16989 372 aaKnown RBP eCLIP27.96■■■□□ 2.07
HNF4A-205ENST00000443598 BCL2L12Q9HB09 334 aa27.96■■■□□ 2.07
HNF4A-205ENST00000443598 LAMB4A4D0S4 1761 aa27.96■■■□□ 2.07
HNF4A-205ENST00000443598 PRAMEF22A3QJZ6 481 aa27.96■■■□□ 2.07
HNF4A-205ENST00000443598 POLRMTO00411 1230 aaKnown RBP27.96■■■□□ 2.07
HNF4A-205ENST00000443598 BABAM1Q9NWV8 329 aa27.96■■■□□ 2.07
HNF4A-205ENST00000443598 SCN7AQ01118 1682 aa27.95■■■□□ 2.07
HNF4A-205ENST00000443598 PXDNLA1KZ92 1463 aa27.94■■■□□ 2.06
HNF4A-205ENST00000443598 EIF4A1P60842 406 aaKnown RBP27.94■■■□□ 2.06
HNF4A-205ENST00000443598 NFIXQ14938 502 aa27.93■■■□□ 2.06
HNF4A-205ENST00000443598 AFDNP55196 1824 aaKnown RBP27.93■■■□□ 2.06
HNF4A-205ENST00000443598 N4BP2Q86UW6 1770 aaPredicted RBP27.93■■■□□ 2.06
HNF4A-205ENST00000443598 ZNF330Q9Y3S2 320 aaPredicted RBP27.92■■■□□ 2.06
HNF4A-205ENST00000443598 NRXN2Q9P2S2 1712 aa27.92■■■□□ 2.06
HNF4A-205ENST00000443598 GIGYF1O75420 1035 aaPredicted RBP27.92■■■□□ 2.06
HNF4A-205ENST00000443598 TBC1D2BQ9UPU7 963 aa27.91■■■□□ 2.06
HNF4A-205ENST00000443598 RRP7AQ9Y3A4 280 aaKnown RBP27.91■■■□□ 2.06
HNF4A-205ENST00000443598 BCORQ6W2J9 1755 aa27.9■■■□□ 2.06
HNF4A-205ENST00000443598 TSPYL4Q9UJ04 414 aa27.89■■■□□ 2.06
HNF4A-205ENST00000443598 BRCA1P38398 1863 aaKnown RBP27.89■■■□□ 2.05
HNF4A-205ENST00000443598 NEUROD2Q15784 382 aa27.89■■■□□ 2.05
HNF4A-205ENST00000443598 TRIM35Q9UPQ4 493 aa27.89■■■□□ 2.05
HNF4A-205ENST00000443598 CAMTA2O94983 1202 aa27.88■■■□□ 2.05
HNF4A-205ENST00000443598 DZIP3Q86Y13 1208 aaKnown RBP27.88■■■□□ 2.05
HNF4A-205ENST00000443598 A0A0G2JLW4 131 aa27.87■■■□□ 2.05
HNF4A-205ENST00000443598 NBPF26B4DH59 902 aa27.87■■■□□ 2.05
HNF4A-205ENST00000443598 RGL2O15211 777 aa27.87■■■□□ 2.05
HNF4A-205ENST00000443598 NBPF10Q6P3W6 841 aaKnown RBP27.87■■■□□ 2.05
HNF4A-205ENST00000443598 NBPF15Q8N660 670 aa27.87■■■□□ 2.05
HNF4A-205ENST00000443598 ANP32CO43423 234 aa27.86■■■□□ 2.05
HNF4A-205ENST00000443598 SERPINB2P05120 415 aa27.86■■■□□ 2.05
HNF4A-205ENST00000443598 PIP4K2AP48426 406 aaPredicted RBP27.86■■■□□ 2.05
HNF4A-205ENST00000443598 DPEP1P16444 411 aa27.85■■■□□ 2.05
HNF4A-205ENST00000443598 TBC1D9BQ66K14 1250 aa27.85■■■□□ 2.05
HNF4A-205ENST00000443598 CLEC4GQ6UXB4 293 aa27.85■■■□□ 2.05
HNF4A-205ENST00000443598 CARMIL3Q8ND23 1372 aa27.83■■■□□ 2.05
HNF4A-205ENST00000443598 CHL1O00533 1208 aa27.82■■■□□ 2.04
HNF4A-205ENST00000443598 KCNA3P22001 575 aa27.82■■■□□ 2.04
HNF4A-205ENST00000443598 BICDL1Q6ZP65 573 aa27.82■■■□□ 2.04
HNF4A-205ENST00000443598 ERBB4Q15303 1308 aa27.82■■■□□ 2.04
HNF4A-205ENST00000443598 WWC3Q9ULE0 1092 aa27.81■■■□□ 2.04
HNF4A-205ENST00000443598 ZNF652Q9Y2D9 606 aa27.81■■■□□ 2.04
HNF4A-205ENST00000443598 CCDC184Q52MB2 194 aa27.81■■■□□ 2.04
HNF4A-205ENST00000443598 SETDB2Q96T68 719 aa27.81■■■□□ 2.04
HNF4A-205ENST00000443598 ARFGEF1Q9Y6D6 1849 aa27.8■■■□□ 2.04
HNF4A-205ENST00000443598 APAF1O14727 1248 aa27.8■■■□□ 2.04
HNF4A-205ENST00000443598 PIM2Q9P1W9 311 aa27.8■■■□□ 2.04
HNF4A-205ENST00000443598 BCS1LQ9Y276 419 aa27.78■■■□□ 2.04
HNF4A-205ENST00000443598 ZNF784Q8NCA9 323 aaPredicted RBP27.77■■■□□ 2.04
HNF4A-205ENST00000443598 DLEC1Q9Y238 1755 aa27.76■■■□□ 2.03
HNF4A-205ENST00000443598 CFAP44Q96MT7 982 aa27.76■■■□□ 2.03
HNF4A-205ENST00000443598 CHRNA5P30532 468 aa27.75■■■□□ 2.03
HNF4A-205ENST00000443598 PDZRN3Q9UPQ7 1066 aa27.75■■■□□ 2.03
HNF4A-205ENST00000443598 ERVV-1B6SEH8 477 aa27.74■■■□□ 2.03
HNF4A-205ENST00000443598 CALD1Q05682 793 aaKnown RBP27.74■■■□□ 2.03
HNF4A-205ENST00000443598 DALRD3Q5D0E6 543 aaKnown RBP27.74■■■□□ 2.03
HNF4A-205ENST00000443598 PRR5LQ6MZQ0 368 aa27.74■■■□□ 2.03
HNF4A-205ENST00000443598 MRS2Q9HD23 443 aa27.74■■■□□ 2.03
HNF4A-205ENST00000443598 LAS1LQ9Y4W2 734 aaKnown RBP27.74■■■□□ 2.03
HNF4A-205ENST00000443598 ANKRD31Q8N7Z5 1873 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms