RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 USP44Q9H0E7 712 aa10.75□□□□□ -0.69
RER1-205ENST00000443438 C5P01031 1676 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 SEC24BO95487 1268 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 GNAI2P04899 355 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 CABP4P57796 275 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 ANKRD45Q5TZF3 282 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 LNPKQ9C0E8 428 aa10.74□□□□□ -0.69
RER1-205ENST00000443438 DDX21Q9NR30 783 aaKnown RBP eCLIP10.74□□□□□ -0.69
RER1-205ENST00000443438 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 TOM1O60784 492 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 GNAI3P08754 354 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 ATP8B2P98198 1209 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 KSR2Q6VAB6 950 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 PI4KAP1Q8N8J0 262 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 DNAAF4Q8WXU2 420 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 HYPKQ9NX55 129 aa10.73□□□□□ -0.69
RER1-205ENST00000443438 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
RER1-205ENST00000443438 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
RER1-205ENST00000443438 FMNL2Q96PY5 1086 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 SRCIN1Q9C0H9 1055 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 USP16Q9Y5T5 823 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 IBTKQ9P2D0 1353 aaPredicted RBP10.72□□□□□ -0.69
RER1-205ENST00000443438 TNS2Q63HR2 1409 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 KCPQ6ZWJ8 1503 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 PAPPAQ13219 1627 aa10.72□□□□□ -0.69
RER1-205ENST00000443438 PHLPP1O60346 1717 aa10.71□□□□□ -0.69
RER1-205ENST00000443438 ALDH1L1O75891 902 aa10.71□□□□□ -0.69
RER1-205ENST00000443438 ANP32AP39687 249 aaKnown RBP10.71□□□□□ -0.69
RER1-205ENST00000443438 DDX54Q8TDD1 881 aaKnown RBP10.71□□□□□ -0.69
RER1-205ENST00000443438 RGS17Q9UGC6 210 aaPredicted RBP10.71□□□□□ -0.69
RER1-205ENST00000443438 MAP3K2Q9Y2U5 619 aa10.71□□□□□ -0.69
RER1-205ENST00000443438 LRRFIP2Q9Y608 721 aaKnown RBP10.71□□□□□ -0.69
RER1-205ENST00000443438 TOGARAM1Q9Y4F4 1720 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 PNMA6EA0A0J9YXQ4 647 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 POLA2Q14181 598 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
RER1-205ENST00000443438 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 C16orf71Q8IYS4 520 aaPredicted RBP10.7□□□□□ -0.7
RER1-205ENST00000443438 TTC5Q8N0Z6 440 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 UBR2Q8IWV8 1755 aa10.7□□□□□ -0.7
RER1-205ENST00000443438 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 UTYO14607 1347 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 HMMRO75330 724 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 NBPF7P0C2Y1 421 aaPredicted RBP10.69□□□□□ -0.7
RER1-205ENST00000443438 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 SSH3Q8TE77 659 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 FOXD4L1Q9NU39 408 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 NRAPQ86VF7 1730 aa10.69□□□□□ -0.7
RER1-205ENST00000443438 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
RER1-205ENST00000443438 IGKV5-2P06315 115 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 UBTFL1P0CB47 393 aaPredicted RBP10.68□□□□□ -0.7
RER1-205ENST00000443438 NBPF14Q5TI25 921 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 NBPF10Q6P3W6 841 aaKnown RBP10.68□□□□□ -0.7
RER1-205ENST00000443438 COPS6Q7L5N1 327 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 OTUD7AQ8TE49 926 aaPredicted RBP10.68□□□□□ -0.7
RER1-205ENST00000443438 XAGE3Q8WTP9 111 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
RER1-205ENST00000443438 ERBB4Q15303 1308 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 SPATA31A1Q5TZJ5 1347 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 SALL3Q9BXA9 1300 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 DDX58O95786 925 aaKnown RBP10.67□□□□□ -0.7
RER1-205ENST00000443438 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 LINS1Q8NG48 757 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 PIGBQ92521 554 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 SLIT2O94813 1529 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
RER1-205ENST00000443438 LRP6O75581 1613 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 WNK3Q9BYP7 1800 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 MYL6BP14649 208 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 GSPT1P15170 499 aaKnown RBP10.66□□□□□ -0.7
RER1-205ENST00000443438 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
RER1-205ENST00000443438 MTX1Q13505 466 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 CWF19L2Q2TBE0 894 aaKnown RBP10.66□□□□□ -0.7
RER1-205ENST00000443438 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 METTL22Q9BUU2 404 aaPredicted RBP10.66□□□□□ -0.7
RER1-205ENST00000443438 ATG3Q9NT62 314 aa10.66□□□□□ -0.7
RER1-205ENST00000443438 SPATA31A5Q5VU36 1347 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 SPATA31A7Q8IWB4 1347 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 PIP4K2AP48426 406 aaPredicted RBP10.65□□□□□ -0.7
RER1-205ENST00000443438 TTC22Q5TAA0 569 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 CDCA7Q9BWT1 371 aaPredicted RBP10.65□□□□□ -0.7
RER1-205ENST00000443438 OSBPL3Q9H4L5 887 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 EXOC6BQ9Y2D4 811 aa10.65□□□□□ -0.7
RER1-205ENST00000443438 THRAP3Q9Y2W1 955 aaKnown RBP10.65□□□□□ -0.7
RER1-205ENST00000443438 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 EXOC5O00471 708 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 A1BGP04217 495 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 SUCLG2Q96I99 432 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 TBC1D32Q96NH3 1257 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 TMOD3Q9NYL9 352 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 ASAP1Q9ULH1 1129 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 NOP58Q9Y2X3 529 aaKnown RBP10.64□□□□□ -0.71
RER1-205ENST00000443438 BCL9O00512 1426 aa10.64□□□□□ -0.71
RER1-205ENST00000443438 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
RER1-205ENST00000443438 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms