RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 COL15A1P39059 1388 aa29.34■■■□□ 2.29
HDLBP-220ENST00000442730 STARD3NLO95772 234 aa29.32■■■□□ 2.28
HDLBP-220ENST00000442730 GPR162Q16538 588 aa29.3■■■□□ 2.28
HDLBP-220ENST00000442730 TEX13AQ9BXU3 409 aaPredicted RBP29.3■■■□□ 2.28
HDLBP-220ENST00000442730 C10orf71Q711Q0 1435 aa29.29■■■□□ 2.28
HDLBP-220ENST00000442730 FKBP8Q14318 412 aa29.29■■■□□ 2.28
HDLBP-220ENST00000442730 KIF13BQ9NQT8 1826 aa29.28■■■□□ 2.28
HDLBP-220ENST00000442730 YY1P25490 414 aa29.27■■■□□ 2.28
HDLBP-220ENST00000442730 CANXP27824 592 aaKnown RBP29.27■■■□□ 2.28
HDLBP-220ENST00000442730 PELP1Q8IZL8 1130 aaKnown RBP29.27■■■□□ 2.28
HDLBP-220ENST00000442730 TAF7Q15545 349 aaPredicted RBP29.26■■■□□ 2.27
HDLBP-220ENST00000442730 ZPR1O75312 459 aa29.25■■■□□ 2.27
HDLBP-220ENST00000442730 YBX3P16989 372 aaKnown RBP eCLIP29.25■■■□□ 2.272e-9■□□□□ 10.1
HDLBP-220ENST00000442730 EIF5P55010 431 aaKnown RBP29.25■■■□□ 2.27
HDLBP-220ENST00000442730 USPL1Q5W0Q7 1092 aa29.25■■■□□ 2.27
HDLBP-220ENST00000442730 THUMPD2Q9BTF0 503 aaKnown RBP29.25■■■□□ 2.27
HDLBP-220ENST00000442730 NARFQ9UHQ1 456 aa29.25■■■□□ 2.27
HDLBP-220ENST00000442730 KDM3BQ7LBC6 1761 aa29.25■■■□□ 2.27
HDLBP-220ENST00000442730 KIAA1551Q9HCM1 1747 aa29.25■■■□□ 2.27
HDLBP-220ENST00000442730 DDR1Q08345 913 aa29.24■■■□□ 2.27
HDLBP-220ENST00000442730 PARP3Q9Y6F1 533 aa29.24■■■□□ 2.27
HDLBP-220ENST00000442730 PXDNLA1KZ92 1463 aa29.23■■■□□ 2.27
HDLBP-220ENST00000442730 SCN7AQ01118 1682 aa29.22■■■□□ 2.27
HDLBP-220ENST00000442730 PRAMEF22A3QJZ6 481 aa29.22■■■□□ 2.27
HDLBP-220ENST00000442730 WDR43Q15061 677 aaKnown RBP eCLIP29.22■■■□□ 2.27
HDLBP-220ENST00000442730 MIS18AQ9NYP9 233 aa29.22■■■□□ 2.27
HDLBP-220ENST00000442730 SNRPA1P09661 255 aaKnown RBP29.21■■■□□ 2.27
HDLBP-220ENST00000442730 BCL2L12Q9HB09 334 aa29.21■■■□□ 2.27
HDLBP-220ENST00000442730 ZNF316A6NFI3 1004 aaPredicted RBP29.2■■■□□ 2.26
HDLBP-220ENST00000442730 A1BGP04217 495 aa29.2■■■□□ 2.26
HDLBP-220ENST00000442730 CCDC146Q8IYE0 955 aa29.2■■■□□ 2.26
HDLBP-220ENST00000442730 A0A087WZG4 1122 aa29.19■■■□□ 2.26
HDLBP-220ENST00000442730 TM4SF1P30408 202 aa29.19■■■□□ 2.26
HDLBP-220ENST00000442730 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
HDLBP-220ENST00000442730 TMPOP42166 694 aaKnown RBP29.19■■■□□ 2.26
HDLBP-220ENST00000442730 PNISRQ8TF01 805 aaKnown RBP29.19■■■□□ 2.26
HDLBP-220ENST00000442730 USP16Q9Y5T5 823 aa29.19■■■□□ 2.26
HDLBP-220ENST00000442730 LAMB4A4D0S4 1761 aa29.18■■■□□ 2.26
HDLBP-220ENST00000442730 POLRMTO00411 1230 aaKnown RBP29.18■■■□□ 2.26
HDLBP-220ENST00000442730 RIPK4P57078 832 aa29.18■■■□□ 2.26
HDLBP-220ENST00000442730 ADAMTS8Q9UP79 889 aa29.17■■■□□ 2.26
HDLBP-220ENST00000442730 ZNF330Q9Y3S2 320 aaPredicted RBP29.17■■■□□ 2.26
HDLBP-220ENST00000442730 CHD4Q14839 1912 aa29.17■■■□□ 2.26
HDLBP-220ENST00000442730 GRIN3BO60391 1043 aa29.16■■■□□ 2.26
HDLBP-220ENST00000442730 NFIXQ14938 502 aa29.16■■■□□ 2.26
HDLBP-220ENST00000442730 RUNDC1Q96C34 613 aa29.16■■■□□ 2.26
HDLBP-220ENST00000442730 TGFB2P61812 414 aa29.15■■■□□ 2.26
HDLBP-220ENST00000442730 RRP7AQ9Y3A4 280 aaKnown RBP29.15■■■□□ 2.26
HDLBP-220ENST00000442730 N4BP2Q86UW6 1770 aaPredicted RBP29.14■■■□□ 2.26
HDLBP-220ENST00000442730 LMOD3Q0VAK6 560 aa29.14■■■□□ 2.26
HDLBP-220ENST00000442730 WWC3Q9ULE0 1092 aa29.14■■■□□ 2.26
HDLBP-220ENST00000442730 NRXN2Q9P2S2 1712 aa29.14■■■□□ 2.25
HDLBP-220ENST00000442730 PIP4K2AP48426 406 aaPredicted RBP29.13■■■□□ 2.25
HDLBP-220ENST00000442730 TBC1D2BQ9UPU7 963 aa29.13■■■□□ 2.25
HDLBP-220ENST00000442730 BCORQ6W2J9 1755 aa29.13■■■□□ 2.25
HDLBP-220ENST00000442730 EIF4A1P60842 406 aaKnown RBP29.12■■■□□ 2.25
HDLBP-220ENST00000442730 A0A0G2JLW4 131 aa29.1■■■□□ 2.25
HDLBP-220ENST00000442730 NBPF26B4DH59 902 aa29.1■■■□□ 2.25
HDLBP-220ENST00000442730 NBPF10Q6P3W6 841 aaKnown RBP29.1■■■□□ 2.25
HDLBP-220ENST00000442730 NBPF15Q8N660 670 aa29.1■■■□□ 2.25
HDLBP-220ENST00000442730 AFDNP55196 1824 aaKnown RBP29.1■■■□□ 2.25
HDLBP-220ENST00000442730 GIGYF1O75420 1035 aaPredicted RBP29.09■■■□□ 2.25
HDLBP-220ENST00000442730 CAMTA2O94983 1202 aa29.09■■■□□ 2.25
HDLBP-220ENST00000442730 DPEP1P16444 411 aa29.09■■■□□ 2.25
HDLBP-220ENST00000442730 NEUROD2Q15784 382 aa29.08■■■□□ 2.25
HDLBP-220ENST00000442730 NPM2Q86SE8 214 aaKnown RBP29.08■■■□□ 2.25
HDLBP-220ENST00000442730 TSPYL4Q9UJ04 414 aa29.08■■■□□ 2.25
HDLBP-220ENST00000442730 BRCA1P38398 1863 aaKnown RBP29.08■■■□□ 2.25
HDLBP-220ENST00000442730 TBC1D9BQ66K14 1250 aa29.07■■■□□ 2.24
HDLBP-220ENST00000442730 DZIP3Q86Y13 1208 aaKnown RBP29.07■■■□□ 2.24
HDLBP-220ENST00000442730 TRIM35Q9UPQ4 493 aa29.07■■■□□ 2.24
HDLBP-220ENST00000442730 BICDL1Q6ZP65 573 aa29.06■■■□□ 2.24
HDLBP-220ENST00000442730 BABAM1Q9NWV8 329 aa29.06■■■□□ 2.24
HDLBP-220ENST00000442730 SERPINB2P05120 415 aa29.05■■■□□ 2.24
HDLBP-220ENST00000442730 KCNA3P22001 575 aa29.04■■■□□ 2.24
HDLBP-220ENST00000442730 CARMIL3Q8ND23 1372 aa29.03■■■□□ 2.24
HDLBP-220ENST00000442730 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
HDLBP-220ENST00000442730 ZNF784Q8NCA9 323 aaPredicted RBP29.02■■■□□ 2.24
HDLBP-220ENST00000442730 CHRNA5P30532 468 aa29.01■■■□□ 2.23
HDLBP-220ENST00000442730 BCS1LQ9Y276 419 aa29.01■■■□□ 2.23
HDLBP-220ENST00000442730 CHL1O00533 1208 aa28.98■■■□□ 2.23
HDLBP-220ENST00000442730 RGL2O15211 777 aa28.98■■■□□ 2.23
HDLBP-220ENST00000442730 CLEC4GQ6UXB4 293 aa28.98■■■□□ 2.23
HDLBP-220ENST00000442730 PIM2Q9P1W9 311 aa28.98■■■□□ 2.23
HDLBP-220ENST00000442730 APAF1O14727 1248 aa28.97■■■□□ 2.23
HDLBP-220ENST00000442730 SETDB2Q96T68 719 aa28.97■■■□□ 2.23
HDLBP-220ENST00000442730 ZNF652Q9Y2D9 606 aa28.97■■■□□ 2.23
HDLBP-220ENST00000442730 DLEC1Q9Y238 1755 aa28.97■■■□□ 2.23
HDLBP-220ENST00000442730 ANP32CO43423 234 aa28.96■■■□□ 2.23
HDLBP-220ENST00000442730 PRR5LQ6MZQ0 368 aa28.96■■■□□ 2.23
HDLBP-220ENST00000442730 ARFGEF1Q9Y6D6 1849 aa28.96■■■□□ 2.23
HDLBP-220ENST00000442730 ERBB4Q15303 1308 aa28.95■■■□□ 2.23
HDLBP-220ENST00000442730 ANKRD31Q8N7Z5 1873 aa28.95■■■□□ 2.23
HDLBP-220ENST00000442730 ADCY9O60503 1353 aa28.94■■■□□ 2.22
HDLBP-220ENST00000442730 DALRD3Q5D0E6 543 aaKnown RBP28.94■■■□□ 2.22
HDLBP-220ENST00000442730 MYL6BP14649 208 aa28.92■■■□□ 2.22
HDLBP-220ENST00000442730 NGEFQ8N5V2 710 aa28.92■■■□□ 2.22
HDLBP-220ENST00000442730 CNBD1Q8NA66 436 aa28.92■■■□□ 2.22
HDLBP-220ENST00000442730 LAS1LQ9Y4W2 734 aaKnown RBP28.92■■■□□ 2.22
HDLBP-220ENST00000442730 COL11A2P13942 1736 aaPredicted RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms