RNA–Protein interactions for RNA: ENST00000442633.1

TM4SF19-TCTEX1D2-201, Transcript of TM4SF19-TCTEX1D2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF19-TCTEX1D2, Length 964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF19-TCTEX1D2-201ENST00000442633 FMNL2Q96PY5 1086 aa23.32■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 KIAA1551Q9HCM1 1747 aa23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 COL15A1P39059 1388 aa23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 CANXP27824 592 aaKnown RBP23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 FKBP8Q14318 412 aa23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 N4BP2Q86UW6 1770 aaPredicted RBP23.31■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.322e-6■■■■□ 20.2
TM4SF19-TCTEX1D2-201ENST00000442633 PRKRIP1Q9H875 184 aaPredicted RBP23.3■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 MAPK8IP3Q9UPT6 1336 aa23.3■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 STARD3NLO95772 234 aa23.29■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 USPL1Q5W0Q7 1092 aa23.29■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 MIS18AQ9NYP9 233 aa23.28■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 WWC3Q9ULE0 1092 aa23.28■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 PRAMEF22A3QJZ6 481 aa23.27■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 ZPR1O75312 459 aa23.27■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 PARP3Q9Y6F1 533 aa23.27■■□□□ 1.32
TM4SF19-TCTEX1D2-201ENST00000442633 C10orf71Q711Q0 1435 aa23.26■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 DDR1Q08345 913 aa23.26■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 TAF7Q15545 349 aaPredicted RBP23.26■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 A1BGP04217 495 aa23.25■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 NARFQ9UHQ1 456 aa23.25■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 ZNF330Q9Y3S2 320 aaPredicted RBP23.24■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 PXDNLA1KZ92 1463 aa23.24■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 SCN7AQ01118 1682 aa23.23■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 LAMB4A4D0S4 1761 aa23.23■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 PIP4K2AP48426 406 aaPredicted RBP23.23■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 BRCA1P38398 1863 aaKnown RBP23.22■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 TM4SF1P30408 202 aa23.22■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 SNRPA1P09661 255 aaKnown RBP23.21■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 RIPK4P57078 832 aa23.21■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 WDR43Q15061 677 aaKnown RBP eCLIP23.21■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
TM4SF19-TCTEX1D2-201ENST00000442633 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NFIXQ14938 502 aa23.2■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 IL6STP40189 918 aaPredicted RBP23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 ADAMTS8Q9UP79 889 aa23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 TBC1D2BQ9UPU7 963 aa23.19■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 A0A087WZG4 1122 aa23.18■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 GRIN3BO60391 1043 aa23.18■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 TGFB2P61812 414 aa23.17■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 PNISRQ8TF01 805 aaKnown RBP23.17■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 DPEP1P16444 411 aa23.16■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 BICDL1Q6ZP65 573 aa23.16■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
TM4SF19-TCTEX1D2-201ENST00000442633 CAMTA2O94983 1202 aa23.13■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 TBC1D9BQ66K14 1250 aa23.13■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 GIGYF1O75420 1035 aaPredicted RBP23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 SERPINB2P05120 415 aa23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 NPM2Q86SE8 214 aaKnown RBP23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 ANKRD31Q8N7Z5 1873 aa23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 ZNF784Q8NCA9 323 aaPredicted RBP23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 ARFGEF1Q9Y6D6 1849 aa23.12■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 KCNA3P22001 575 aa23.11■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 LMOD3Q0VAK6 560 aa23.11■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 TSPYL4Q9UJ04 414 aa23.11■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 BCS1LQ9Y276 419 aa23.11■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 CHRNA5P30532 468 aa23.1■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 CARMIL3Q8ND23 1372 aa23.1■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 DLEC1Q9Y238 1755 aa23.09■■□□□ 1.29
TM4SF19-TCTEX1D2-201ENST00000442633 NUP98P52948 1817 aa23.07■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 NGEFQ8N5V2 710 aa23.05■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 PIM2Q9P1W9 311 aa23.05■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 COL11A2P13942 1736 aaPredicted RBP23.05■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 SETDB2Q96T68 719 aa23.04■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 APAF1O14727 1248 aa23.03■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 PRR5LQ6MZQ0 368 aa23.03■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 BABAM1Q9NWV8 329 aa23.03■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 CHL1O00533 1208 aa23.02■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 MYL6BP14649 208 aa23.02■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 HLFQ16534 295 aa23.02■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 DALRD3Q5D0E6 543 aaKnown RBP23.02■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 CACNA1SQ13698 1873 aa23.02■■□□□ 1.28
TM4SF19-TCTEX1D2-201ENST00000442633 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
TM4SF19-TCTEX1D2-201ENST00000442633 KRT24Q2M2I5 525 aa23.01■■□□□ 1.27
TM4SF19-TCTEX1D2-201ENST00000442633 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms